BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

50 / 622 papers shown

Title
Natural Language Processing in-and-for Design Research L. Siddharth L. Blessing Jianxi Luo AI4CE 32 41 0 27 Nov 2021
BCH-NLP at BioCreative VII Track 3: medications detection in tweets using transformer networks and multi-task learning Dongfang Xu Shan Chen T. Miller MedIm 24 4 0 26 Nov 2021
Few-shot Named Entity Recognition with Cloze Questions V. Gatta V. Moscato Marco Postiglione Giancarlo Sperlí 27 4 0 24 Nov 2021
Improving Tagging Consistency and Entity Coverage for Chemical Identification in Full-text Articles Hyunjae Kim Mujeen Sung Wonjin Yoon Sungjoon Park Jaewoo Kang 32 10 0 20 Nov 2021
Literature-Augmented Clinical Outcome Prediction Aakanksha Naik Sravanthi Parasa Sergey Feldman Lucy Lu Wang Tom Hope LM&MA 31 25 0 16 Nov 2021
Testing the Generalization of Neural Language Models for COVID-19 Misinformation Detection Jan Philip Wahle Nischal Ashok Kumar Terry Ruas Norman Meuschke Tirthankar Ghosal Bela Gipp 38 17 0 15 Nov 2021
CU-UD: text-mining drug and chemical-protein interactions with ensembles of BERT-based models M. Karabulut K. Vijay-Shanker Yifan Peng 29 3 0 11 Nov 2021
Recent Advances in Automated Question Answering In Biomedical Domain K. D. Baksi 28 0 0 10 Nov 2021
Focusing on Potential Named Entities During Active Label Acquisition Ali Osman Berk Şapcı Oznur Tastan Reyyan Yeniterzi 27 2 0 06 Nov 2021
Recent Advances in Natural Language Processing via Large Pre-Trained Language Models: A Survey Bonan Min Hayley L Ross Elior Sulem Amir Pouran Ben Veyseh Thien Huu Nguyen Oscar Sainz Eneko Agirre Ilana Heinz Dan Roth LM&MA VLM AI4CE 85 1,039 0 01 Nov 2021
Clinical Evidence Engine: Proof-of-Concept For A Clinical-Domain-Agnostic Decision Support Infrastructure Bojian Hou Hao Zhang Gur Ladizhinsky Gur Ladizhinsky Stephen Yang Volodymyr Kuleshov Fei Wang Qian Yang 19 4 0 31 Oct 2021
FinEAS: Financial Embedding Analysis of Sentiment Asier Gutiérrez-Fandiño M. N. Alonso P. Kolm Jordi Armengol-Estapé AIFin 14 6 0 31 Oct 2021
PatchFormer: An Efficient Point Transformer with Patch Attention Zhang Cheng Haocheng Wan Xinyi Shen Zizhao Wu 3DPC 27 66 0 30 Oct 2021
Backdoor Pre-trained Models Can Transfer to All Lujia Shen S. Ji Xuhong Zhang Jinfeng Li Jing Chen Jie Shi Chengfang Fang Jianwei Yin Ting Wang AAML SILM 33 120 0 30 Oct 2021
MentalBERT: Publicly Available Pretrained Language Models for Mental Healthcare Shaoxiong Ji Tianlin Zhang Luna Ansari Jie Fu Prayag Tiwari Min Zhang VLM AI4MH 33 223 0 29 Oct 2021
BioIE: Biomedical Information Extraction with Multi-head Attention Enhanced Graph Convolutional Network Jialun Wu Yang Liu Zeyu Gao Tieliang Gong Chunbao Wang Chen Li 29 16 0 26 Oct 2021
ClimateBert: A Pretrained Language Model for Climate-Related Text Nicolas Webersinke Mathias Kraus Jiabo Huang Markus Leippold AI4CE 37 131 0 22 Oct 2021
Fusing Heterogeneous Factors with Triaffine Mechanism for Nested Named Entity Recognition Zheng Yuan Chuanqi Tan Songfang Huang Fei Huang 57 46 0 14 Oct 2021
Building Chinese Biomedical Language Models via Multi-Level Text Discrimination Quan Wang Songtai Dai Benfeng Xu Yajuan Lyu Yong Zhu Hua Wu Haifeng Wang 71 14 0 14 Oct 2021
Open-Domain Question-Answering for COVID-19 and Other Emergent Domains Sharon Levy Kevin Mo Wenhan Xiong Wenjie Wang OOD LRM 43 12 0 13 Oct 2021
Bottom-Up Constituency Parsing and Nested Named Entity Recognition with Pointer Networks Aaron Courville Kewei Tu 48 47 0 11 Oct 2021
K-Wav2vec 2.0: Automatic Speech Recognition based on Joint Decoding of Graphemes and Syllables Jounghee Kim Pilsung Kang VLM 29 6 0 11 Oct 2021
Advances in Multi-turn Dialogue Comprehension: A Survey Zhuosheng Zhang Hai Zhao 29 21 0 11 Oct 2021
Self-Supervised Knowledge Assimilation for Expert-Layman Text Style Transfer Wenda Xu Michael Stephen Saxon Misha Sra Wenjie Wang MedIm 19 13 0 06 Oct 2021
FoodChem: A food-chemical relation extraction model Gjorgjina Cenikj B. Korousic-Seljak T. Eftimov 45 6 0 05 Oct 2021
COVIDRead: A Large-scale Question Answering Dataset on COVID-19 Tanik Saikh Sovan Kumar Sahoo Asif Ekbal P. Bhattacharyya 27 5 0 05 Oct 2021
JuriBERT: A Masked-Language Model Adaptation for French Legal Text S. Douka Hadi Abdine Michalis Vazirgiannis Rajaa El Hamdani David Restrepo Amariles AILaw 87 31 0 04 Oct 2021
MatSciBERT: A Materials Domain Language Model for Text Mining and Information Extraction Tanishq Gupta Mohd Zaki N. M. A. Krishnan Mausam 55 178 0 30 Sep 2021
Knowledge-Aware Neural Networks for Medical Forum Question Classification Soumyadeep Roy Sudip Chakraborty Aishik Mandal Gunjan Balde Prakhar Sharma Anandhavelu Natarajan Megha Khosla S. Sural Niloy Ganguly AI4MH 25 9 0 27 Sep 2021
Coreference Resolution for the Biomedical Domain: A Survey Pengcheng Lu Massimo Poesio 34 15 0 25 Sep 2021
Slot Filling for Biomedical Information Extraction Yannis Papanikolaou Marlene Staib Justin Grace Francine Bennett MedIm 37 12 0 17 Sep 2021
Spanish Biomedical Crawled Corpus: A Large, Diverse Dataset for Spanish Biomedical Language Models C. Carrino Jordi Armengol-Estapé Ona de Gibert Bonet Asier Gutiérrez-Fandiño Aitor Gonzalez-Agirre Martin Krallinger Marta Villegas 24 20 0 16 Sep 2021
The Unreasonable Effectiveness of the Baseline: Discussing SVMs in Legal Text Classification Benjamin Clavié Marc Alphonsus ELM AILaw 37 10 0 15 Sep 2021
Can Language Models be Biomedical Knowledge Bases? Mujeen Sung Jinhyuk Lee Sean S. Yi Minji Jeon Sungdong Kim Jaewoo Kang AI4MH 128 105 0 15 Sep 2021
Evaluating Biomedical BERT Models for Vocabulary Alignment at Scale in the UMLS Metathesaurus Goonmeet Bajaj Vinh Phu Nguyen Thilini Wijesiriwardene H. Y. Yip Vishesh Javangula Srinivasan Parthasarathy A. Sheth O. Bodenreider 16 1 0 14 Sep 2021
Learning Bill Similarity with Annotated and Augmented Corpora of Bills Jiseon Kim Elden Griggs In Song Kim Alice Oh AILaw 20 5 0 14 Sep 2021
Task-adaptive Pre-training and Self-training are Complementary for Natural Language Understanding Shiyang Li Semih Yavuz Wenhu Chen Xifeng Yan 22 12 0 14 Sep 2021
Question Answering over Electronic Devices: A New Benchmark Dataset and a Multi-Task Learning based QA Framework Abhilash Nandy Soumya Sharma Shubham Maddhashiya K. Sachdeva Pawan Goyal Niloy Ganguly 30 17 0 13 Sep 2021
Clinical Trial Information Extraction with BERT Xiong Liu Greg L. Hersch I. Khalil M. Devarakonda 25 26 0 11 Sep 2021
AutoTriggER: Label-Efficient and Robust Named Entity Recognition with Auxiliary Trigger Extraction Dong-Ho Lee Ravi Kiran Selvam Sheikh Muhammad Sarwar Bill Yuchen Lin Fred Morstatter Jay Pujara Elizabeth Boschee James Allan Xiang Ren 44 2 0 10 Sep 2021
Balancing Methods for Multi-label Text Classification with Long-Tailed Class Distribution Yi Huang Buse Giledereli Abdullatif Köksal Arzucan Özgür Elif Özkirimli VLM 44 77 0 10 Sep 2021
IndoBERTweet: A Pretrained Language Model for Indonesian Twitter with Effective Domain-Specific Vocabulary Initialization Fajri Koto Jey Han Lau Timothy Baldwin VLM 59 82 0 10 Sep 2021
Biomedical and Clinical Language Models for Spanish: On the Benefits of Domain-Specific Pretraining in a Mid-Resource Scenario C. Carrino Jordi Armengol-Estapé Asier Gutiérrez-Fandiño Joan Llop-Palao Marc Pàmies Aitor Gonzalez-Agirre Marta Villegas 18 44 0 08 Sep 2021
GPT-3 Models are Poor Few-Shot Learners in the Biomedical Domain M. Moradi Kathrin Blagec F. Haberl Matthias Samwald LM&MA AI4MH 42 65 0 06 Sep 2021
Sent2Span: Span Detection for PICO Extraction in the Biomedical Text without Span Annotations Shifeng Liu Yifang Sun Bing Li Wei Wang Florence T. Bourgeois A. Dunn 19 14 0 06 Sep 2021
Self-Supervised Detection of Contextual Synonyms in a Multi-Class Setting: Phenotype Annotation Use Case Jingqing Zhang Luis Bolaños T. Li Ashwani Tanwar Guilherme Freire Xian Yang Julia Ive Vibhor Gupta Yike Guo 21 14 0 04 Sep 2021
LegaLMFiT: Efficient Short Legal Text Classification with LSTM Language Model Pre-Training Benjamin Clavié Akshita Gheewala Paul Briton Marc Alphonsus Rym Labiyaad Francesco Piccoli VLM AILaw 32 2 0 02 Sep 2021
T3-Vis: a visual analytic framework for Training and fine-Tuning Transformers in NLP Raymond Li Wen Xiao Lanjun Wang Hyeju Jang Giuseppe Carenini ViT 31 23 0 31 Aug 2021
Query-Focused Extractive Summarisation for Finding Ideal Answers to Biomedical and COVID-19 Questions Diego Mollá Aliod Urvashi Khanna Dima Galat Vincent Nguyen Maciej Rybiński RALM 43 2 0 27 Aug 2021
SMedBERT: A Knowledge-Enhanced Pre-trained Language Model with Structured Semantics for Medical Text Mining Taolin Zhang Zerui Cai Chengyu Wang Minghui Qiu Bite Yang Xiaofeng He AI4MH 28 52 0 20 Aug 2021