BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

50 / 611 papers shown

Title
Generative AI-Powered Plugin for Robust Federated Learning in Heterogeneous IoT Networks Youngjoon Lee J. Gong Joonhyuk Kang 54 0 0 31 Oct 2024
Efficient Bilinear Attention-based Fusion for Medical Visual Question Answering Zhilin Zhang Jie Wang Zhanghao Qin Ruiqi Zhu Xiaoliang Gong MedIm 57 0 0 28 Oct 2024
Medical-GAT: Cancer Document Classification Leveraging Graph-Based Residual Network for Scenarios with Limited Data Elias Hossain Tasfia Nuzhat Shamsul Masum Shahram Rahimi Sudip Mittal 44 0 0 19 Oct 2024
Enabling Scalable Evaluation of Bias Patterns in Medical LLMs Hamed Fayyaz Raphael Poulain Rahmatollah Beheshti 42 1 0 18 Oct 2024
MedINST: Meta Dataset of Biomedical Instructions Wenhan Han Meng Fang Zihan Zhang Yu Yin Zirui Song Ling-Hao Chen Mykola Pechenizkiy Qingyu Chen LM&MA 35 2 0 17 Oct 2024
Retrieval-Reasoning Large Language Model-based Synthetic Clinical Trial Generation Zhihao Xu Fang Wu Tianfan Fu Yue Zhao SyDa LRM 50 0 0 16 Oct 2024
Disease Entity Recognition and Normalization is Improved with Large Language Model Derived Synthetic Normalized Mentions Kuleen Sasse Shinjitha Vadlakonda Richard Kennedy J. D. Osborne AI4CE 33 0 0 10 Oct 2024
Contextual Breach: Assessing the Robustness of Transformer-based QA Models Asir Saadat Nahian Ibn Asad Md Farhan Ishmam AAML 46 0 0 17 Sep 2024
Generating Synthetic Free-text Medical Records with Low Re-identification Risk using Masked Language Modeling Samuel Belkadi Libo Ren Nicolo Micheletti Lifeng Han Goran Nenadic SyDa MedIm 37 0 0 15 Sep 2024
AlpaPICO: Extraction of PICO Frames from Clinical Trial Documents Using LLMs Madhusudan Ghosh Shrimon Mukherjee Asmit Ganguly Partha Basuchowdhuri S. Naskar Debasis Ganguly 38 7 0 15 Sep 2024
Towards understanding evolution of science through language model series Junjie Dong Zhuoqi Lyu Qing Ke AI4TS 39 0 0 15 Sep 2024
DomURLs_BERT: Pre-trained BERT-based Model for Malicious Domains and URLs Detection and Classification Abdelkader El Mahdaouy Salima Lamsiyah Meryem Janati Idrissi H. Alami Zakaria Yartaoui Ismail Berrada 21 3 0 13 Sep 2024
A Simplified Retriever to Improve Accuracy of Phenotype Normalizations by Large Language Models D. B. Hier Thanh Son Do Tayo Obafemi-Ajayi 36 1 0 11 Sep 2024
A Small Claims Court for the NLP: Judging Legal Text Classification Strategies With Small Datasets Mariana Y. Noguti Edduardo Vellasques Luiz Eduardo Soares de Oliveira AILaw 48 1 0 09 Sep 2024
LLM-3D Print: Large Language Models To Monitor and Control 3D Printing Yayati Jadhav P. Pak Amir Barati Farimani AI4CE 86 9 0 26 Aug 2024
BERT's Conceptual Cartography: Mapping the Landscapes of Meaning Nina Haket Ryan Daniels 37 0 0 13 Aug 2024
Enhancing Healthcare through Large Language Models: A Study on Medical Question Answering Haoran Yu Chang Yu Zihan Wang Dongxian Zou Hao Qin AI4MH LM&MA 43 25 0 08 Aug 2024
High-Throughput Phenotyping of Clinical Text Using Large Language Models D. B. Hier S. I. Munzir Anne Stahlfeld Tayo Obafemi-Ajayi M. Carrithers LM&MA 60 1 0 02 Aug 2024
Harvesting Textual and Structured Data from the HAL Publication Repository Francis Kulumba Wissam Antoun Guillaume Vimont Laurent Romary 40 2 0 30 Jul 2024
A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model Yingxue Xu Yihui Wang Fengtao Zhou Jiabo Ma Shu Yang ... Anjia Han Ronald Cheong Kin Chan Li Liang Xiuming Zhang Hao Chen 37 16 0 22 Jul 2024
Generation and De-Identification of Indian Clinical Discharge Summaries using LLMs Sanjeet Singh Shreya Gupta Niralee Gupta Naimish Sharma Lokesh Srivastava Vibhu Agarwal Ashutosh Modi 29 0 0 08 Jul 2024
BadCLM: Backdoor Attack in Clinical Language Models for Electronic Health Records Weimin Lyu Zexin Bi Fusheng Wang Chao Chen 52 5 0 06 Jul 2024
MedPix 2.0: A Comprehensive Multimodal Biomedical Data set for Advanced AI Applications Irene Siragusa Salvatore Contino Massimo La Ciura Rosario Alicata Roberto Pirrone 64 3 0 03 Jul 2024
Generative AI for Synthetic Data Across Multiple Medical Modalities: A Systematic Review of Recent Developments and Challenges Mahmoud Ibrahim Yasmina Al Khalil S. Amirrajab Chang Sun M. Breeuwer J. Pluim Bart Elen Gokhan Ertaylan Michel Dumontier SyDa MedIm 42 7 0 27 Jun 2024
MU-Bench: A Multitask Multimodal Benchmark for Machine Unlearning Jiali Cheng Hadi Amiri BDL 47 3 0 21 Jun 2024
DeviceBERT: Applied Transfer Learning With Targeted Annotations and Vocabulary Enrichment to Identify Medical Device and Component Terminology in FDA Recall Summaries Miriam Farrington 23 0 0 08 Jun 2024
Predicting Genetic Mutation from Whole Slide Images via Biomedical-Linguistic Knowledge Enhanced Multi-label Classification Gexin Huang Chenfei Wu Mingjie Li Xiaojun Chang Ling-Hao Chen Ying Sun Shen Zhao Xiaodan Liang Liang Lin MedIm 37 0 0 05 Jun 2024
Towards Effective Time-Aware Language Representation: Exploring Enhanced Temporal Understanding in Language Models Jiexin Wang Adam Jatowt Yi Cai AI4CE 39 1 0 04 Jun 2024
Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings Hiroaki Yamagiwa Ryoma Hashimoto Kiwamu Arakane Ken Murakami Shou Soeda Momose Oyama Mariko Okada Hidetoshi Shimodaira Hidetoshi Shimodaira 44 0 0 03 Jun 2024
Enhancing Antibiotic Stewardship using a Natural Language Approach for Better Feature Representation Simon A. Lee Trevor Brokowski Jeffrey N. Chiang 29 8 0 30 May 2024
A Survey of Deep Learning-based Radiology Report Generation Using Multimodal Data Xinyi Wang Grazziela Figueredo Ruizhe Li W. Zhang Weitong Chen Xin Chen MedIm ViT 52 2 0 21 May 2024
MedConceptsQA: Open Source Medical Concepts QA Benchmark Ofir Ben Shoham Nadav Rappoport AI4MH ELM 57 5 0 12 May 2024
VANER: Leveraging Large Language Model for Versatile and Adaptive Biomedical Named Entity Recognition Junyi Bian W. Zhai Xiaodi Huang Jiaxuan Zheng Shanfeng Zhu 43 2 0 27 Apr 2024
Large Language Model Agent as a Mechanical Designer Yayati Jadhav A. Farimani AI4CE LLMAG 101 9 0 26 Apr 2024
"I Wish There Were an AI": Challenges and AI Potential in Cancer Patient-Provider Communication Ziqi Yang Xuhai Xu Bingsheng Yao Jiachen Li Jennifer Bagdasarian G. Gao Dakuo Wang 40 3 0 20 Apr 2024
Unveiling LLM Evaluation Focused on Metrics: Challenges and Solutions Taojun Hu Xiao-Hua Zhou ELM 43 13 0 14 Apr 2024
Navigating the Landscape of Large Language Models: A Comprehensive Review and Analysis of Paradigms and Fine-Tuning Strategies Benjue Weng LM&MA 48 8 0 13 Apr 2024
Global Contrastive Training for Multimodal Electronic Health Records with Language Supervision Yingbo Ma Suraj Kolla Zhenhong Hu Dhruv Kaliraman Victoria Nolan ... Jeremy A. Balch Tyler J. Loftus Parisa Rashidi A. Bihorac B. Shickel AI4TS 33 1 0 10 Apr 2024
Comprehensive Study on German Language Models for Clinical and Biomedical Text Understanding Ahmad Idrissi-Yaghir Amin Dada Henning Schafer Kamyar Arzideh Giulia Baldini ... Peter A. Horn Christin Seifert F. Nensa Jens Kleesiek Christoph M. Friedrich AI4MH 44 2 0 08 Apr 2024
SemEval-2024 Task 2: Safe Biomedical Natural Language Inference for Clinical Trials Mael Jullien Marco Valentino André Freitas LM&MA 41 41 0 07 Apr 2024
Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information Gilchan Park S. McCorkle Carlos Soto Ian K. Blaby Shinjae Yoo 32 6 0 08 Mar 2024
Large Language Models(LLMs) on Tabular Data: Prediction, Generation, and Understanding -- A Survey Xi Fang Weijie Xu Fiona Anting Tan Jiani Zhang Ziqing Hu Yanjun Qi Scott Nickleach Diego Socolinsky Srinivasan H. Sengamedu Christos Faloutsos LMTD ALM 54 66 0 27 Feb 2024
JMLR: Joint Medical LLM and Retrieval Training for Enhancing Reasoning and Professional Question Answering Capability Junda Wang Zhichao Yang Zonghai Yao Hong-ye Yu BDL AI4MH LRM 40 31 0 27 Feb 2024
From Text to Transformation: A Comprehensive Review of Large Language Models' Versatility Pravneet Kaur Gautam Siddharth Kashyap Ankit Kumar Md. Tabrez Nafis Sandeep Kumar Vikrant Shokeen LM&MA 50 54 0 25 Feb 2024
An Evaluation of Large Language Models in Bioinformatics Research Hengchuang Yin Zhonghui Gu Fanhao Wang Yiparemu Abuduhaibaier Yanqiao Zhu Xinming Tu Xian-Sheng Hua Xiao Luo Yizhou Sun LM&MA 38 8 0 21 Feb 2024
How Important is Domain Specificity in Language Models and Instruction Finetuning for Biomedical Relation Extraction? Aviv Brokman Ramakanth Kavuluru LM&MA ALM 34 3 0 21 Feb 2024
InMD-X: Large Language Models for Internal Medicine Doctors Hansle Gwon Imjin Ahn Hyoje Jung Byeolhee Kim Young-Hak Kim Tae Joon Jun LM&MA 44 1 0 19 Feb 2024
A Novel BERT-based Classifier to Detect Political Leaning of YouTube Videos based on their Titles Nouar Aldahoul Talal Rahwan Yasir Zaki 32 0 0 16 Feb 2024
Text-to-Code Generation with Modality-relative Pre-training Fenia Christopoulou Guchun Zhang Gerasimos Lampouras AI4TS 26 1 0 08 Feb 2024
Pretrained Generative Language Models as General Learning Frameworks for Sequence-Based Tasks Ben Fauber 32 2 0 08 Feb 2024