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BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

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Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

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TrialEnroll: Predicting Clinical Trial Enrollment Success with Deep & Cross Network and Large Language Models Ling Yue Sixue Xing Jintai Chen Tianfan Fu 71 1 0 18 Jul 2024
Domain-specific or Uncertainty-aware models: Does it really make a difference for biomedical text classification? Aman Sinha Timothee Mickus Marianne Clausel Mathieu Constant X. Coubez 81 0 0 17 Jul 2024
Causality extraction from medical text using Large Language Models (LLMs) Seethalakshmi Gopalakrishnan Luciana D. Garbayo Wlodek Zadrozny ELM 64 6 0 13 Jul 2024
Establishing Rigorous and Cost-effective Clinical Trials for Artificial Intelligence Models Wanling Gao Yunyou Huang Dandan Cui Zhuoming Yu Wenjing Liu ... Tianyi Wei Suqin Tang Bingjie Xia Zhifei Zhang Jianfeng Zhan 58 0 0 11 Jul 2024
Intelligent Multi-Document Summarisation for Extracting Insights on Racial Inequalities from Maternity Incident Investigation Reports Georgina Cosma Mohit Kumar Singh Patrick Waterson G. T. Jun Jonathan Back 50 0 0 11 Jul 2024
Automatic Extraction of Disease Risk Factors from Medical Publications Maxim Rubchinsky Ella Rabinovich Adi Shraibman Netanel Golan Tali Sahar D. Shweiki 55 0 0 10 Jul 2024
Generation and De-Identification of Indian Clinical Discharge Summaries using LLMs Sanjeet Singh Shreya Gupta Niralee Gupta Naimish Sharma Lokesh Srivastava Vibhu Agarwal Ashutosh Modi 76 0 0 08 Jul 2024
BadCLM: Backdoor Attack in Clinical Language Models for Electronic Health Records Weimin Lyu Zexin Bi Fusheng Wang Chao Chen 82 6 0 06 Jul 2024
Leveraging Task-Specific Knowledge from LLM for Semi-Supervised 3D Medical Image Segmentation Suruchi Kumari Aryan Das Swalpa Kumar Roy Indu Joshi Pravendra Singh 98 3 0 06 Jul 2024
MiniGPT-Med: Large Language Model as a General Interface for Radiology Diagnosis Asma Alkhaldi Raneem Alnajim Layan Alabdullatef Rawan Alyahya Jun Chen Deyao Zhu Ahmed Z. Alsinan Mohamed Elhoseiny LM&MA MedIm 120 25 0 04 Jul 2024
CaseGPT: a case reasoning framework based on language models and retrieval-augmented generation Rui Yang RALM AILaw 35 3 0 04 Jul 2024
Boosting Biomedical Concept Extraction by Rule-Based Data Augmentation Qiwei Shao Fengran Mo Jian-Yun Nie MedIm 100 0 0 03 Jul 2024
MedPix 2.0: A Comprehensive Multimodal Biomedical Data set for Advanced AI Applications Irene Siragusa Salvatore Contino Massimo La Ciura Rosario Alicata Roberto Pirrone 203 3 0 03 Jul 2024
Evaluating the Robustness of Adverse Drug Event Classification Models Using Templates Dorothea MacPhail David Harbecke Lisa Raithel Sebastian Möller 45 1 0 02 Jul 2024
ZeroDDI: A Zero-Shot Drug-Drug Interaction Event Prediction Method with Semantic Enhanced Learning and Dual-Modal Uniform Alignment Ziyan Wang Zhankun Xiong Feng Huang Xuan Liu Wen Zhang 74 6 0 01 Jul 2024
TrialBench: Multi-Modal Artificial Intelligence-Ready Clinical Trial Datasets Jintai Chen Yaojun Hu Mingchen Cai Yingzhou Lu Yue Wang ... Yuqiang Li Lucas Glass Tianfan Fu Marinka Zitnik Tianfan Fu 131 0 0 30 Jun 2024
BioMNER: A Dataset for Biomedical Method Entity Recognition Chen Tang Bohao Yang Kun Zhao Bo Lv Chenghao Xiao Frank Guerin Chenghua Lin 63 0 0 28 Jun 2024
The Odyssey of Commonsense Causality: From Foundational Benchmarks to Cutting-Edge Reasoning Shaobo Cui Zhijing Jin Bernhard Schölkopf Boi Faltings CML LRM 85 4 0 27 Jun 2024
Generative AI for Synthetic Data Across Multiple Medical Modalities: A Systematic Review of Recent Developments and Challenges Mahmoud Ibrahim Yasmina Al Khalil S. Amirrajab Chang Sun M. Breeuwer J. Pluim Bart Elen Gokhan Ertaylan Michel Dumontier SyDa MedIm 106 10 0 27 Jun 2024
Improving Entity Recognition Using Ensembles of Deep Learning and Fine-tuned Large Language Models: A Case Study on Adverse Event Extraction from Multiple Sources Yiming Li Deepthi Viswaroopan William He Jianfu Li X. Zuo Hua Xu Cui Tao 75 4 0 26 Jun 2024
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Evaluation of Language Models in the Medical Context Under Resource-Constrained Settings Andrea Posada Daniel Rueckert Felix Meissen Philip Muller LM&MA ELM 58 0 0 24 Jun 2024
Guardrails for avoiding harmful medical product recommendations and off-label promotion in generative AI models Daniel Lopez-Martinez MedIm 91 1 0 24 Jun 2024
Evaluating the Effectiveness of the Foundational Models for Q&A Classification in Mental Health care Hassan Alhuzali Ashwag Alasmari AI4MH 79 2 0 23 Jun 2024
Geneverse: A collection of Open-source Multimodal Large Language Models for Genomic and Proteomic Research Tianyu Liu Yijia Xiao Xiao Luo Hua Xu W. Zheng Hongyu Zhao 85 5 0 21 Jun 2024
GiusBERTo: A Legal Language Model for Personal Data De-identification in Italian Court of Auditors Decisions Giulio Salierno Rosamaria Bertè Luca Attias Carla Morrone Dario Pettazzoni Daniela Battisti AILaw 40 2 0 21 Jun 2024
Word Matters: What Influences Domain Adaptation in Summarization? Yinghao Li Siyu Miao Heyan Huang Yang Gao 87 4 0 21 Jun 2024
MU-Bench: A Multitask Multimodal Benchmark for Machine Unlearning Jiali Cheng Hadi Amiri BDL 106 4 0 21 Jun 2024
A Large Language Model Outperforms Other Computational Approaches to the High-Throughput Phenotyping of Physician Notes S. I. Munzir D. B. Hier Chelsea Oommen M. Carrithers LM&MA 82 3 0 20 Jun 2024
Infusing clinical knowledge into tokenisers for language models Abul Hasan Jinge Wu Quang Ngoc Nguyen Salomé Andres Imane Guellil Huayu Zhang Arlene Casey Beatrice Alex Bruce Guthrie Honghan Wu 79 2 0 20 Jun 2024
News Without Borders: Domain Adaptation of Multilingual Sentence Embeddings for Cross-lingual News Recommendation Andreea Iana Fabian David Schmidt Goran Glavaš Heiko Paulheim 173 3 0 18 Jun 2024
Decoding the Narratives: Analyzing Personal Drug Experiences Shared on Reddit Layla A. Bouzoubaa Elham Aghakhani Max Song Minh Trinh R. Rezapour 67 1 0 17 Jun 2024
FlexCare: Leveraging Cross-Task Synergy for Flexible Multimodal Healthcare Prediction Muhao Xu Zhenfeng Zhu Youru Li Shuai Zheng Yawei Zhao Kunlun He Yao Zhao 77 1 0 17 Jun 2024
Fine-Tuning or Fine-Failing? Debunking Performance Myths in Large Language Models Scott Barnett Zac Brannelly Stefanus Kurniawan Sheng Wong LRM 57 2 0 17 Jun 2024
A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery Yu Zhang Xiusi Chen Bowen Jin Sheng Wang Shuiwang Ji Wei Wang Jiawei Han 140 42 0 16 Jun 2024
Bag of Lies: Robustness in Continuous Pre-training BERT I. Gevers Walter Daelemans 85 0 0 14 Jun 2024
No perspective, no perception!! Perspective-aware Healthcare Answer Summarization Gauri Naik Sharad Chandakacherla S. Yadav Md. Shad Akhtar 88 11 0 13 Jun 2024
To be Continuous, or to be Discrete, Those are Bits of Questions Yiran Wang Masao Utiyama 80 4 0 12 Jun 2024
I-SIRch: AI-Powered Concept Annotation Tool For Equitable Extraction And Analysis Of Safety Insights From Maternity Investigations Mohit Kumar Singh Georgina Cosma Patrick Waterson Jonathan Back G. T. Jun 54 2 0 08 Jun 2024