Publicly Available Clinical BERT Embeddings

6 April 2019

Matthew B. A. McDermott

AI4MH

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Papers citing "Publicly Available Clinical BERT Embeddings"

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Title
Transfer Learning for the Prediction of Entity Modifiers in Clinical Text: Application to Opioid Use Disorder Case Detection A. Almudaifer Whitney L. Covington JaMor M. Hairston Zachary Deitch Ankit Anand ... William Bradford Lauren Walter Eaton Ellen Sue S Feldman John D Osborne 31 0 0 26 Jan 2024
Quality of Answers of Generative Large Language Models vs Peer Patients for Interpreting Lab Test Results for Lay Patients: Evaluation Study Zhe He Balu Bhasuran Qiao Jin Shubo Tian Karim Hanna Cindy Shavor Lisbeth Y. Garcia Arguello Patrick Murray Zhiyong Lu LM&MA ELM AI4MH 10 9 0 23 Jan 2024
Free Form Medical Visual Question Answering in Radiology Abhishek Narayanan Rushabh Musthyala Rahul Sankar A. Nistala P. Singh Jacopo Cirrone 21 2 0 23 Jan 2024
Next Visit Diagnosis Prediction via Medical Code-Centric Multimodal Contrastive EHR Modelling with Hierarchical Regularisation Heejoon Koo 40 3 0 22 Jan 2024
Advancements in eHealth Data Analytics through Natural Language Processing and Deep Learning Elena Simona Apostol Ciprian-Octavian Truică 36 0 0 19 Jan 2024
Enhancing medical vision-language contrastive learning via inter-matching relation modelling Mingjian Li Mingyuan Meng M. Fulham David Dagan Feng Lei Bi Jinman Kim VLM 48 1 0 19 Jan 2024
Improving fine-grained understanding in image-text pre-training Ioana Bica Anastasija Ilić Matthias Bauer Goker Erdogan Matko Bovsnjak ... A. Gritsenko Matthias Minderer Charles Blundell Razvan Pascanu Jovana Mitrović VLM 30 22 0 18 Jan 2024
MICA: Towards Explainable Skin Lesion Diagnosis via Multi-Level Image-Concept Alignment Yequan Bie Luyang Luo Hao Chen 38 14 0 16 Jan 2024
Autocompletion of Chief Complaints in the Electronic Health Records using Large Language Models K. M. S. Islam A. S. Nipu Praveen Madiraju Priya Deshpande LM&MA 37 7 0 11 Jan 2024
Estimating Text Similarity based on Semantic Concept Embeddings Tim vor der Brück Marc Pouly 14 0 0 09 Jan 2024
Uncertainty Quantification on Clinical Trial Outcome Prediction Tianyi Chen Yingzhou Lu Nan Hao Capucine Van Rechem Jintai Chen Tianfan Fu 30 21 0 07 Jan 2024
Data-Centric Foundation Models in Computational Healthcare: A Survey Yunkun Zhang Jin Gao Zheling Tan Lingfeng Zhou Kexin Ding Mu Zhou Shaoting Zhang Dequan Wang AI4CE 45 22 0 04 Jan 2024
Multi-modal vision-language model for generalizable annotation-free pathology localization and clinical diagnosis Hao Yang Hong-Yu Zhou Zhihuan Li Yuanxu Gao Zhihuan Li ... Song Wu Tao Tan Hairong Zheng Kang Zhang Shanshan Wang 39 1 0 04 Jan 2024
Multimodal self-supervised learning for lesion localization Hao Yang Hong-Yu Zhou Cheng Li Weijian Huang Jiarun Liu Yong Liang Shanshan Wang SSL 40 3 0 03 Jan 2024
XAI for In-hospital Mortality Prediction via Multimodal ICU Data Xingqiao Li Jindong Gu Zhiyong Wang Yancheng Yuan Bo Du Fengxiang He 38 2 0 29 Dec 2023
Masked Contrastive Reconstruction for Cross-modal Medical Image-Report Retrieval Zeqiang Wei Kai Jin Xiuzhuang Zhou MedIm 24 5 0 26 Dec 2023
UniChest: Conquer-and-Divide Pre-training for Multi-Source Chest X-Ray Classification Tianjie Dai Ruipeng Zhang Feng Hong Jiangchao Yao Ya Zhang Yanfeng Wang 38 8 0 18 Dec 2023
Low-resource classification of mobility functioning information in clinical sentences using large language models Tuan-Dung Le Thanh Duong Thanh Thieu 38 0 0 15 Dec 2023
Fine-Grained Image-Text Alignment in Medical Imaging Enables Explainable Cyclic Image-Report Generation Wenting Chen Linlin Shen Jingyang Lin Jiebo Luo Xiang Li Yixuan Yuan MedIm 26 10 0 13 Dec 2023
A Foundational Multimodal Vision Language AI Assistant for Human Pathology Ming Y. Lu Bowen Chen Drew F. K. Williamson Richard J. Chen Kenji Ikamura ... Ivy Liang L. Le Tong Ding Anil V. Parwani Faisal Mahmood MedIm LM&MA 26 20 0 13 Dec 2023
Multimodal Pretraining of Medical Time Series and Notes Ryan N. King Tianbao Yang Bobak J. Mortazavi 30 12 0 11 Dec 2023
Medical Vision Language Pretraining: A survey Prashant Shrestha Sanskar Amgain Bidur Khanal Cristian A. Linte Binod Bhattarai VLM 34 14 0 11 Dec 2023
KnowGPT: Knowledge Graph based Prompting for Large Language Models Qinggang Zhang Junnan Dong Hao Chen Daochen Zha Zailiang Yu Xiao Huang KELM RALM 24 5 0 11 Dec 2023
Labrador: Exploring the Limits of Masked Language Modeling for Laboratory Data David R. Bellamy Bhawesh Kumar Cindy Wang Andrew L. Beam MedIm 36 3 0 09 Dec 2023
Two Directions for Clinical Data Generation with Large Language Models: Data-to-Label and Label-to-Data Rumeng Li Xun Wang Hong Yu LM&MA 75 23 0 09 Dec 2023
ZePT: Zero-Shot Pan-Tumor Segmentation via Query-Disentangling and Self-Prompting Yankai Jiang Zhongzhen Huang Rongzhao Zhang Xiaofan Zhang Shaoting Zhang VLM 42 10 0 07 Dec 2023
XAIQA: Explainer-Based Data Augmentation for Extractive Question Answering Joel Stremmel A. Saeedi Hamid Hassanzadeh Sanjit Batra Jeffrey K Hertzberg Jaime Murillo Eran Halperin MedIm 26 1 0 06 Dec 2023
Deep Multimodal Fusion for Surgical Feedback Classification Rafal Kocielnik Elyssa Y. Wong Timothy N. Chu Lydia Lin De-An Huang Jiayun Wang A. Anandkumar Andrew J. Hung 35 2 0 06 Dec 2023
G2D: From Global to Dense Radiography Representation Learning via Vision-Language Pre-training Che Liu Ouyang Cheng Sibo Cheng Anand Shah Wenjia Bai Rossella Arcucci VLM MedIm 35 8 0 03 Dec 2023
A Generalizable Deep Learning System for Cardiac MRI R. Shad C. Zakka Dhamanpreet Kaur R. Fong R. Filice ... Victor Ferrari Euan A. Ashley Michael A. Acker Curt P. Langlotz W. Hiesinger MedIm 57 1 0 01 Dec 2023
Radiology-Aware Model-Based Evaluation Metric for Report Generation Amos Calamida Farhad Nooralahzadeh Morteza Rohanian Koji Fujimoto Mizuho Nishio Michael Krauthammer 35 3 0 28 Nov 2023
MANTIS at #SMM4H 2023: Leveraging Hybrid and Ensemble Models for Detection of Social Anxiety Disorder on Reddit S. Zanwar Daniel Wiechmann Yu Qiao E. Kerz 16 0 0 28 Nov 2023
Ascle: A Python Natural Language Processing Toolkit for Medical Text Generation Rui Yang Qingcheng Zeng Keen You Yujie Qiao Lucas Huang ... Dragomir R. Radev Zhiyong Lu Hua Xu Qingyu Chen Irene Z Li ELM LM&MA 31 3 0 28 Nov 2023
MEDITRON-70B: Scaling Medical Pretraining for Large Language Models Zeming Chen Alejandro Hernández Cano Angelika Romanou Antoine Bonnet Kyle Matoba ... Axel Marmet Syrielle Montariol Mary-Anne Hartley Martin Jaggi Antoine Bosselut LM&MA AI4MH MedIm 53 180 0 27 Nov 2023
Leveraging deep active learning to identify low-resource mobility functioning information in public clinical notes Tuan-Dung Le Zhuqi Miao Samuel Alvarado Brittany Smith William Paiva Thanh Thieu 18 1 0 27 Nov 2023
Unified Medical Image Pre-training in Language-Guided Common Semantic Space Xiaoxuan He Yifan Yang Xinyang Jiang Xufang Luo Haoji Hu Siyun Zhao Dongsheng Li Yuqing Yang Lili Qiu 46 1 0 24 Nov 2023
H-COAL: Human Correction of AI-Generated Labels for Biomedical Named Entity Recognition Xiaojing Duan John P. Lalor 17 1 0 20 Nov 2023
Beyond Images: An Integrative Multi-modal Approach to Chest X-Ray Report Generation Nurbanu Aksoy Serge Sharoff Selçuk Başer Nishant Ravikumar Alejandro F Frangi MedIm 21 4 0 18 Nov 2023
German FinBERT: A German Pre-trained Language Model Moritz Scherrmann 35 0 0 15 Nov 2023
An Eye on Clinical BERT: Investigating Language Model Generalization for Diabetic Eye Disease Phenotyping Keith Harrigian Tina Tang Anthony Gonzales Cindy X. Cai Mark Dredze VLM 41 2 0 15 Nov 2023
Knowledge Graph Representations to enhance Intensive Care Time-Series Predictions Samyak Jain Manuel Burger Gunnar Rätsch Rita Kuznetsova 16 3 0 13 Nov 2023
MuST: Multimodal Spatiotemporal Graph-Transformer for Hospital Readmission Prediction Yan Miao Lequan Yu 14 2 0 11 Nov 2023
Automatic Report Generation for Histopathology images using pre-trained Vision Transformers S. Sengupta Donald E. Brown VLM MedIm ViT 26 9 0 10 Nov 2023
A Survey of Large Language Models in Medicine: Progress, Application, and Challenge Hongjian Zhou Fenglin Liu Boyang Gu Xinyu Zou Jinfa Huang ... Yefeng Zheng Lei A. Clifton Zheng Li Fenglin Liu David A. Clifton LM&MA 41 108 0 09 Nov 2023
Pre-training LLMs using human-like development data corpus Khushi Bhardwaj Raj Sanjay Shah Sashank Varma 32 6 0 08 Nov 2023
Investigating Deep-Learning NLP for Automating the Extraction of Oncology Efficacy Endpoints from Scientific Literature Aline Gendrin-Brokmann Eden Harrison Julianne Noveras L. Souliotis Harris Vince ... Francisco Costa David Milward S. Dimitrievska Paul Metcalfe Emilie Louvet 20 0 0 03 Nov 2023
Hierarchical Classification System for Breast Cancer Specimen Report (HCSBC) -- an end-to-end model for characterizing severity and diagnosis Thiago Santos Harish Kamath Christopher R. McAdams Mary S. Newell Marina B. Mosunjac ... Geoffrey H. Smith Constance Lehman J. Gichoya Imon Banerjee Hari M. Trivedi 32 0 0 02 Nov 2023
Enhanced Knowledge Injection for Radiology Report Generation Qingqiu Li Jilan Xu Runtian Yuan Mohan Chen Yuejie Zhang Rui Feng Xiaobo Zhang Shang Gao MedIm 50 7 0 01 Nov 2023
XAI-CLASS: Explanation-Enhanced Text Classification with Extremely Weak Supervision Daniel Hajialigol Hanwen Liu Xuan Wang VLM 21 5 0 31 Oct 2023
Zero-Shot Medical Information Retrieval via Knowledge Graph Embedding Yuqi Wang Zeqiang Wang Wei Wang Qi Chen Kaizhu Huang Anh Nguyen Suparna De MedIm 30 2 0 31 Oct 2023