Publicly Available Clinical BERT Embeddings

6 April 2019

Matthew B. A. McDermott

AI4MH

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Papers citing "Publicly Available Clinical BERT Embeddings"

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Title
MedDec: A Dataset for Extracting Medical Decisions from Discharge Summaries Mohamed Elgaar Jiali Cheng Nidhi Vakil Hadi Amiri Leo Anthony Celi 36 2 0 23 Aug 2024
TRRG: Towards Truthful Radiology Report Generation With Cross-modal Disease Clue Enhanced Large Language Model Yuhao Wang Chao Hao Yawen Cui Xinqi Su Weicheng Xie Tao Tan Zitong Yu LM&MA MedIm 36 0 0 22 Aug 2024
HYDEN: Hyperbolic Density Representations for Medical Images and Reports Zhi Qiao Linbin Han Xiantong Zhen Jia-Hong Gao Zhen Qian 49 0 0 19 Aug 2024
Improving VTE Identification through Language Models from Radiology Reports: A Comparative Study of Mamba, Phi-3 Mini, and BERT Jamie Deng Yusen Wu Yelena Yesha Phuong Nguyen 21 0 0 16 Aug 2024
When Raw Data Prevails: Are Large Language Model Embeddings Effective in Numerical Data Representation for Medical Machine Learning Applications? Yanjun Gao Skatje Myers Shan Chen Dmitriy Dligach Timothy A Miller Danielle S. Bitterman M. Churpek Majid Afshar 52 7 0 15 Aug 2024
CLEFT: Language-Image Contrastive Learning with Efficient Large Language Model and Prompt Fine-Tuning Yuexi Du Brian Chang Nicha Dvornek MedIm VLM 48 2 0 30 Jul 2024
Prompting Encoder Models for Zero-Shot Classification: A Cross-Domain Study in Italian S. Auriemma Martina Miliani Mauro Madeddu Alessandro Bondielli Lucia Passaro Alessandro Lenci 43 0 0 30 Jul 2024
Time Matters: Examine Temporal Effects on Biomedical Language Models Weisi Liu Zhe He Xiaolei Huang 29 5 0 24 Jul 2024
A Comparative Study on Patient Language across Therapeutic Domains for Effective Patient Voice Classification in Online Health Discussions Giorgos Lysandrou Roma English Owen Vanja Popovic Grant Le Brun Aryo Pradipta Gema Beatrice Alex E. Fairley 23 0 0 23 Jul 2024
HERGen: Elevating Radiology Report Generation with Longitudinal Data Fuying Wang Shenghui Du Lequan Yu MedIm 48 5 0 21 Jul 2024
DEPICT: Diffusion-Enabled Permutation Importance for Image Classification Tasks Sarah Jabbour Gregory Kondas Ella Kazerooni Michael Sjoding David Fouhey Jenna Wiens FAtt DiffM 47 1 0 19 Jul 2024
DALL-M: Context-Aware Clinical Data Augmentation with LLMs Chihcheng Hsieh Catarina Moreira Isabel Blanco Nobre Sandra Costa Sousa Chun Ouyang M. Brereton Joaquim A. Jorge Jacinto C. Nascimento 54 0 0 11 Jul 2024
Generation and De-Identification of Indian Clinical Discharge Summaries using LLMs Sanjeet Singh Shreya Gupta Niralee Gupta Naimish Sharma Lokesh Srivastava Vibhu Agarwal Ashutosh Modi 29 0 0 08 Jul 2024
WSI-VQA: Interpreting Whole Slide Images by Generative Visual Question Answering Pingyi Chen Chenglu Zhu Sunyi Zheng Honglin Li Lin Yang 55 7 0 08 Jul 2024
Enhancing Label-efficient Medical Image Segmentation with Text-guided Diffusion Models Chun-Mei Feng MedIm DiffM 29 5 0 07 Jul 2024
BadCLM: Backdoor Attack in Clinical Language Models for Electronic Health Records Weimin Lyu Zexin Bi Fusheng Wang Chao Chen 50 5 0 06 Jul 2024
RULE: Reliable Multimodal RAG for Factuality in Medical Vision Language Models Peng Xia Kangyu Zhu Haoran Li Hongtu Zhu Yun Li Gang Li Linjun Zhang Huaxiu Yao MedIm 45 32 0 06 Jul 2024
Extracting and Encoding: Leveraging Large Language Models and Medical Knowledge to Enhance Radiological Text Representation Pablo Messina René Vidal Denis Parra Álvaro Soto Vladimir Araujo MedIm 64 2 0 02 Jul 2024
Large Language Models Struggle in Token-Level Clinical Named Entity Recognition Qiuhao Lu Rui Li Andrew Wen Jinlian Wang Liwei Wang Hongfang Liu LM&MA 39 2 0 30 Jun 2024
TocBERT: Medical Document Structure Extraction Using Bidirectional Transformers Majd Saleh Sarra Baghdadi Stéphane Paquelet MedIm 35 0 0 27 Jun 2024
Evaluation of Language Models in the Medical Context Under Resource-Constrained Settings Andrea Posada Daniel Rueckert Felix Meissen Philip Muller LM&MA ELM 37 0 0 24 Jun 2024
Evaluating the Effectiveness of the Foundational Models for Q&A Classification in Mental Health care Hassan Alhuzali Ashwag Alasmari AI4MH 31 2 0 23 Jun 2024
Word Matters: What Influences Domain Adaptation in Summarization? Yinghao Li Siyu Miao Heyan Huang Yang Gao 46 3 0 21 Jun 2024
Infusing clinical knowledge into tokenisers for language models Abul Hasan Jinge Wu Quang Ngoc Nguyen Salomé Andres Imane Guellil Huayu Zhang Arlene Casey Beatrice Alex Bruce Guthrie Honghan Wu 46 1 0 20 Jun 2024
IoT-Based Preventive Mental Health Using Knowledge Graphs and Standards for Better Well-Being A. Gyrard Seyedali Mohammadi Manas Gaur Antonio Kung AI4MH 52 1 0 19 Jun 2024
WellDunn: On the Robustness and Explainability of Language Models and Large Language Models in Identifying Wellness Dimensions Seyedali Mohammadi Edward Raff Jinendra Malekar Vedant Palit Francis Ferraro Manas Gaur AI4MH 57 1 0 17 Jun 2024
A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery Yu Zhang Xiusi Chen Bowen Jin Sheng Wang Shuiwang Ji Wei Wang Jiawei Han 44 27 0 16 Jun 2024
CAT: Coordinating Anatomical-Textual Prompts for Multi-Organ and Tumor Segmentation Zhongzhen Huang Yankai Jiang Rongzhao Zhang Shaoting Zhang Xiaofan Zhang MedIm 70 4 0 11 Jun 2024
A Dual-View Approach to Classifying Radiology Reports by Co-Training Yutong Han Yan Yuan Lili Mou 40 0 0 10 Jun 2024
CPLIP: Zero-Shot Learning for Histopathology with Comprehensive Vision-Language Alignment Sajid Javed Arif Mahmood I. I. Ganapathi Fayaz Ali Dharejo Naoufel Werghi Mohammed Bennamoun VLM LM&MA 45 12 0 07 Jun 2024
Predicting Genetic Mutation from Whole Slide Images via Biomedical-Linguistic Knowledge Enhanced Multi-label Classification Gexin Huang Chenfei Wu Mingjie Li Xiaojun Chang Ling-Hao Chen Ying Sun Shen Zhao Xiaodan Liang Liang Lin MedIm 37 0 0 05 Jun 2024
CASE: Efficient Curricular Data Pre-training for Building Assistive Psychology Expert Models Sarthak Harne Monjoy Narayan Choudhury Madhav Rao T. Srikanth Seema Mehrotra Apoorva Vashisht Aarushi Basu Manjit Sodhi AI4MH 29 0 0 01 Jun 2024
GAMedX: Generative AI-based Medical Entity Data Extractor Using Large Language Models Mohammed-Khalil Ghali Abdelrahman Farrag Hajar Sakai Hicham El Baz Yu Jin Sarah Lam LM&MA MedIm 40 8 0 31 May 2024
Enhancing Antibiotic Stewardship using a Natural Language Approach for Better Feature Representation Simon A. Lee Trevor Brokowski Jeffrey N. Chiang 29 8 0 30 May 2024
Unlocking the Power of Spatial and Temporal Information in Medical Multimodal Pre-training Jinxia Yang Bing-Huang Su Wayne Xin Zhao Ji-Rong Wen 40 3 0 30 May 2024
BioBERT-based Deep Learning and Merged ChemProt-DrugProt for Enhanced Biomedical Relation Extraction Bridget T. McInnes Jiawei Tang D. Mahendran Mai H. Nguyen 24 3 0 28 May 2024
How Reliable AI Chatbots are for Disease Prediction from Patient Complaints? A. S. Nipu Sajjadul Islam Praveen Madiraju LM&MA AI4MH 35 1 0 21 May 2024
A Survey of Deep Learning-based Radiology Report Generation Using Multimodal Data Xinyi Wang Grazziela Figueredo Ruizhe Li W. Zhang Weitong Chen Xin Chen MedIm ViT 49 2 0 21 May 2024
Mammo-CLIP: A Vision Language Foundation Model to Enhance Data Efficiency and Robustness in Mammography Shantanu Ghosh Clare B. Poynton Shyam Visweswaran Kayhan Batmanghelich VLM 37 10 0 20 May 2024
MM-Retinal: Knowledge-Enhanced Foundational Pretraining with Fundus Image-Text Expertise Ruiqi Wu Chenran Zhang Jianle Zhang Yi Zhou Tao Zhou Huazhu Fu 41 8 0 20 May 2024
Self-supervised vision-langage alignment of deep learning representations for bone X-rays analysis A. Englebert Anne-Sophie Collin O. Cornu Christophe De Vleeschouwer 34 1 0 14 May 2024
PromptLink: Leveraging Large Language Models for Cross-Source Biomedical Concept Linking Yuzhang Xie Jiaying Lu Joyce C. Ho Fadi B Nahab Xiao Hu Carl Yang 46 4 0 13 May 2024
Length-Aware Multi-Kernel Transformer for Long Document Classification Guangzeng Han Jack Tsao Xiaolei Huang VLM RALM 33 4 0 11 May 2024
Pseudo-Prompt Generating in Pre-trained Vision-Language Models for Multi-Label Medical Image Classification Yaoqin Ye Junjie Zhang Hongwei Shi MedIm VLM 49 0 0 10 May 2024
M3H: Multimodal Multitask Machine Learning for Healthcare Dimitris Bertsimas Yu Ma 24 1 0 29 Apr 2024
A Comprehensive Survey on Evaluating Large Language Model Applications in the Medical Industry Yining Huang Keke Tang Meilian Chen Boyuan Wang ELM LM&MA 29 15 0 24 Apr 2024
CT-GLIP: 3D Grounded Language-Image Pretraining with CT Scans and Radiology Reports for Full-Body Scenarios Jingyang Lin Yingda Xia Jianpeng Zhang Ke Yan Le Lu Jiebo Luo Ling Zhang VLM LM&MA MedIm 45 3 0 23 Apr 2024
Accelerating Medical Knowledge Discovery through Automated Knowledge Graph Generation and Enrichment Mutahira Khalid Raihana Rahman Asim Abbas Sushama Kumari Iram Wajahat S. Bukhari 22 2 0 21 Apr 2024
Personalized Heart Disease Detection via ECG Digital Twin Generation Yaojun Hu Jintai Chen Lianting Hu Dantong Li Jiahuan Yan Haochao Ying Huiying Liang Jian Wu 30 4 0 17 Apr 2024
LLMs4OM: Matching Ontologies with Large Language Models Hamed Babaei Giglou Jennifer D'Souza Felix Engel Sören Auer 48 9 0 16 Apr 2024