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BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

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Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

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Title
Learning to Generate Research Idea with Dynamic Control Ruochen Li Liqiang Jing Chi Han Jiawei Zhou Xinya Du LRM 117 6 0 19 Dec 2024
Unlocking the Potential of Weakly Labeled Data: A Co-Evolutionary Learning Framework for Abnormality Detection and Report Generation Jinghan Sun Dong-mei Wei Zhe Xu Donghuan Lu Hong Liu Hong Wang Sotirios A. Tsaftaris Jingyu Sun Yefeng Zheng Liansheng Wang MedIm 162 0 0 18 Dec 2024
NoteContrast: Contrastive Language-Diagnostic Pretraining for Medical Text Prajwal Kailas Max Homilius Rahul C. Deo Calum A. MacRae 164 0 0 16 Dec 2024
Multilabel Classification for Lung Disease Detection: Integrating Deep Learning and Natural Language Processing Maria Efimovich Jayden Lim Vedant Mehta Ethan Poon 103 0 0 16 Dec 2024
Towards Scientific Discovery with Generative AI: Progress, Opportunities, and Challenges Chandan K. Reddy Parshin Shojaee 150 11 0 16 Dec 2024
Structured Extraction of Real World Medical Knowledge using LLMs for Summarization and Search Edward Kim Manil Shrestha Richard Foty Tom DeLay Vicki Seyfert-Margolis 161 1 0 16 Dec 2024
Large Language Models for Medical Forecasting -- Foresight 2 Z. Kraljevic Joshua Au Yeung D. Bean James T. Teo Richard J. B. Dobson LM&MA 110 0 0 14 Dec 2024
Accurate Medical Named Entity Recognition Through Specialized NLP Models Jiacheng Hu Runyuan Bao Yang Lin Hanchao Zhang Yanlin Xiang 121 7 0 11 Dec 2024
Rephrasing Electronic Health Records for Pretraining Clinical Language Models Jinghui Liu Anthony N. Nguyen SyDa LM&MA 173 0 0 28 Nov 2024
Fine-Tuning Large Language Models for Scientific Text Classification: A Comparative Study Z. R. K. Rostam Gábor Kertész 183 3 0 27 Nov 2024
Can bidirectional encoder become the ultimate winner for downstream applications of foundation models? Lewen Yang Xuanyu Zhou Juao Fan Xinyi Xie Shengxin Zhu AI4CE 123 0 0 27 Nov 2024
Adapter-based Approaches to Knowledge-enhanced Language Models -- A Survey Alexander Fichtl Juraj Vladika Georg Groh KELM 138 1 0 25 Nov 2024
MulModSeg: Enhancing Unpaired Multi-Modal Medical Image Segmentation with Modality-Conditioned Text Embedding and Alternating Training Chengyin Li Hui Zhu Rafi Ibn Sultan H. Bagher-Ebadian Prashant Khanduri Chetty Indrin Kundan Thind Dongxiao Zhu MedIm 129 2 0 23 Nov 2024
SPICA: Retrieving Scenarios for Pluralistic In-Context Alignment Quan Ze Chen K. J. Kevin Feng Chan Young Park Amy X. Zhang 63 0 0 16 Nov 2024
Diagnostic Text-guided Representation Learning in Hierarchical Classification for Pathological Whole Slide Image Jiawen Li Qiehe Sun Renao Yan Yizhi Wang Yuqiu Fu Yani Wei Tian Guan Huijuan Shi Yonghonghe He Anjia Han 99 3 0 16 Nov 2024
Increasing the Accessibility of Causal Domain Knowledge via Causal Information Extraction Methods: A Case Study in the Semiconductor Manufacturing Industry Houssam Razouk Leonie Benischke Daniel Garber Roman Kern 35 1 0 15 Nov 2024
Leveraging Multimodal Models for Enhanced Neuroimaging Diagnostics in Alzheimer's Disease Francesco Chiumento Mingming Liu LM&MA 71 0 0 12 Nov 2024
Greenback Bears and Fiscal Hawks: Finance is a Jungle and Text Embeddings Must Adapt Peter Anderson Mano Vikash Janardhanan Jason He Wei Cheng Charlie Flanagan RALM 50 5 0 11 Nov 2024
Evaluating Large Language Models on Financial Report Summarization: An Empirical Study Xinqi Yang Scott Zang Yong Ren Dingjie Peng Zheng Wen 66 1 0 11 Nov 2024
Building an Efficient Multilingual Non-Profit IR System for the Islamic Domain Leveraging Multiprocessing Design in Rust Vera Pavlova Mohammed Makhlouf 73 1 0 09 Nov 2024
Medical Adaptation of Large Language and Vision-Language Models: Are We Making Progress? Daniel P. Jeong Saurabh Garg Zachary Chase Lipton Michael Oberst LM&MA VLM ELM 75 14 0 06 Nov 2024
A Library Perspective on Supervised Text Processing in Digital Libraries: An Investigation in the Biomedical Domain H. Kroll Pascal Sackhoff Bill Matthias Thang Maha Ksouri Wolf-Tilo Balke 94 0 0 06 Nov 2024
Controlling for Unobserved Confounding with Large Language Model Classification of Patient Smoking Status Samuel Lee Zach Wood-Doughty CML 65 0 0 05 Nov 2024
Explainable cognitive decline detection in free dialogues with a Machine Learning approach based on pre-trained Large Language Models Francisco de Arriba-Pérez Silvia García-Méndez Javier Otero-Mosquera Francisco J. González Castaño 63 5 0 04 Nov 2024
TriG-NER: Triplet-Grid Framework for Discontinuous Named Entity Recognition R. Cabral Soyeon Caren Han Areej Alhassan Riza Batista-Navarro Goran Nenadic Josiah Poon 111 0 0 04 Nov 2024
Diagnosing Medical Datasets with Training Dynamics Laura Wenderoth 31 0 0 03 Nov 2024
BioNCERE: Non-Contrastive Enhancement For Relation Extraction In Biomedical Texts Farshad Noravesh 54 0 0 31 Oct 2024
Generative AI-Powered Plugin for Robust Federated Learning in Heterogeneous IoT Networks Youngjoon Lee J. Gong Joonhyuk Kang 97 0 0 31 Oct 2024
RoBIn: A Transformer-Based Model For Risk Of Bias Inference With Machine Reading Comprehension Abel Corrêa Dias Viviane Pereira Moreira João Luiz Dihl Comba 105 1 0 28 Oct 2024
TransformLLM: Adapting Large Language Models via LLM-Transformed Reading Comprehension Text Iftach Arbel Yehonathan Refael Ofir Lindenbaum AILaw 48 0 0 28 Oct 2024
Efficient Bilinear Attention-based Fusion for Medical Visual Question Answering Zhilin Zhang Jie Wang Zhanghao Qin Ruiqi Zhu Xiaoliang Gong MedIm 220 0 0 28 Oct 2024
Deep Insights into Cognitive Decline: A Survey of Leveraging Non-Intrusive Modalities with Deep Learning Techniques David Ortiz-Perez Manuel Benavent-Lledo José García Rodríguez David Tomás M. Flores Vizcaya-Moreno 69 1 0 24 Oct 2024
Automated Spinal MRI Labelling from Reports Using a Large Language Model Robin Y. Park Rhydian Windsor A. Jamaludin Andrew Zisserman 47 1 0 22 Oct 2024
Generative Design of Functional Metal Complexes Utilizing the Internal Knowledge of Large Language Models Jieyu Lu Zhangde Song Qiyuan Zhao Yuanqi Du Yirui Cao Haojun Jia Chenru Duan AI4CE 99 3 0 21 Oct 2024
Evaluation Of P300 Speller Performance Using Large Language Models Along With Cross-Subject Training Nithin Parthasarathy J. Soetedjo S. Panchavati Nitya Parthasarathy C. Arnold N. Pouratian W. Speier 20 0 0 19 Oct 2024
Weakly-supervised diagnosis identification from Italian discharge letters Vittorio Torri Elisa Barbieri Anna Cantarutti Carlo Giaquinto Francesca Ieva 58 0 0 19 Oct 2024
Medical-GAT: Cancer Document Classification Leveraging Graph-Based Residual Network for Scenarios with Limited Data Elias Hossain Tasfia Nuzhat Shamsul Masum Shahram Rahimi Sudip Mittal 131 0 0 19 Oct 2024
Leveraging Large Language Models for Enhancing Public Transit Services Jiahao Wang Amer Shalaby 49 2 0 18 Oct 2024
Enabling Scalable Evaluation of Bias Patterns in Medical LLMs Hamed Fayyaz Raphael Poulain Rahmatollah Beheshti 104 2 0 18 Oct 2024
MedINST: Meta Dataset of Biomedical Instructions Wenhan Han Meng Fang Zihan Zhang Yu Yin Zirui Song Ling-Hao Chen Mykola Pechenizkiy Qingyu Chen LM&MA 69 3 0 17 Oct 2024
Leveraging LLMs for Translating and Classifying Mental Health Data Konstantinos Skianis A. Seza Doğruöz John Pavlopoulos AI4MH 48 2 0 16 Oct 2024
Identifying Task Groupings for Multi-Task Learning Using Pointwise V-Usable Information Yingya Li Timothy A. Miller Steven Bethard G. Savova 75 2 0 16 Oct 2024
Machine learning approach to brain tumor detection and classification Alice Oh Inyoung Noh Jian Choo Jihoo Lee Justin Park Kate Hwang Sanghyeon Kim Soo Min Oh 68 6 0 16 Oct 2024
Retrieval-Reasoning Large Language Model-based Synthetic Clinical Trial Generation Zhihao Xu Fang Wu Tianfan Fu Yue Zhao SyDa LRM 111 1 0 16 Oct 2024
MedAide: Information Fusion and Anatomy of Medical Intents via LLM-based Agent Collaboration Jinjie Wei Dingkang Yang Yanshu Li Qingyao Xu Zhaoyu Chen ... Yue Jiang Yakun Ju Wei Zhou Yang Liu Lihua Zhang 66 4 0 16 Oct 2024
Unified Representation of Genomic and Biomedical Concepts through Multi-Task, Multi-Source Contrastive Learning Hongyi Yuan Suqi Liu Kelly Cho Katherine P. Liao Alexandre Pereira T. Cai MedIm 57 0 0 14 Oct 2024
Arrhythmia Classification Using Graph Neural Networks Based on Correlation Matrix Seungwoo Han 72 0 0 14 Oct 2024
SciGisPy: a Novel Metric for Biomedical Text Simplification via Gist Inference Score Chen Lyu Gabriele Pergola 58 3 0 12 Oct 2024
Fine-Tuning In-House Large Language Models to Infer Differential Diagnosis from Radiology Reports Luoyao Chen Revant Teotia Antonio Verdone Aidan Cardall Lakshay Tyagi Yiqiu Shen S. Chopra LM&MA 39 2 0 11 Oct 2024
Optimized Biomedical Question-Answering Services with LLM and Multi-BERT Integration Cheng Qian Xianglong Shi Shanshan Yao Yichen Liu Fengming Zhou Zishu Zhang Junaid Akram Ali Braytee Ali Anaissi AI4MH 52 2 0 11 Oct 2024