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Graph neural networks for materials science and chemistry

Graph neural networks for materials science and chemistry

5 August 2022
Patrick Reiser
Marlen Neubert
André Eberhard
Luca Torresi
Chen Zhou
Chen Shao
Houssam Metni
Clint van Hoesel
Henrik Schopmans
T. Sommer
Pascal Friederich
    GNN
    AI4CE
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Papers citing "Graph neural networks for materials science and chemistry"

49 / 149 papers shown
Title
Neural Message Passing with Edge Updates for Predicting Properties of
  Molecules and Materials
Neural Message Passing with Edge Updates for Predicting Properties of Molecules and Materials
Peter Bjørn Jørgensen
K. Jacobsen
Mikkel N. Schmidt
56
82
0
08 Jun 2018
Graph Convolutional Policy Network for Goal-Directed Molecular Graph
  Generation
Graph Convolutional Policy Network for Goal-Directed Molecular Graph Generation
Jiaxuan You
Bowen Liu
Rex Ying
Vijay S. Pande
J. Leskovec
GNN
276
902
0
07 Jun 2018
MolGAN: An implicit generative model for small molecular graphs
MolGAN: An implicit generative model for small molecular graphs
Nicola De Cao
Thomas Kipf
GNN
GAN
169
925
0
30 May 2018
A Generative Model For Electron Paths
A Generative Model For Electron Paths
John Bradshaw
Matt J. Kusner
Brooks Paige
Marwin H. S. Segler
José Miguel Hernández-Lobato
51
56
0
23 May 2018
Constrained Graph Variational Autoencoders for Molecule Design
Constrained Graph Variational Autoencoders for Molecule Design
Qi Liu
Miltiadis Allamanis
Marc Brockschmidt
Alexander L. Gaunt
BDL
67
455
0
23 May 2018
Attention-based Graph Neural Network for Semi-supervised Learning
Attention-based Graph Neural Network for Semi-supervised Learning
K. K. Thekumparampil
Chong-Jun Wang
Sewoong Oh
Li Li
GNN
65
333
0
10 Mar 2018
Learning Deep Generative Models of Graphs
Learning Deep Generative Models of Graphs
Yujia Li
Oriol Vinyals
Chris Dyer
Razvan Pascanu
Peter W. Battaglia
GNN
AI4CE
188
661
0
08 Mar 2018
Syntax-Directed Variational Autoencoder for Structured Data
Syntax-Directed Variational Autoencoder for Structured Data
H. Dai
Yingtao Tian
Bo Dai
Steven Skiena
Le Song
94
328
0
24 Feb 2018
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models
Jiaxuan You
Rex Ying
Xiang Ren
William L. Hamilton
J. Leskovec
GNN
BDL
110
848
0
24 Feb 2018
Tensor field networks: Rotation- and translation-equivariant neural
  networks for 3D point clouds
Tensor field networks: Rotation- and translation-equivariant neural networks for 3D point clouds
Nathaniel Thomas
Tess E. Smidt
S. Kearnes
Lusann Yang
Li Li
Kai Kohlhoff
Patrick F. Riley
3DPC
83
969
0
22 Feb 2018
Junction Tree Variational Autoencoder for Molecular Graph Generation
Junction Tree Variational Autoencoder for Molecular Graph Generation
Wengong Jin
Regina Barzilay
Tommi Jaakkola
343
1,366
0
12 Feb 2018
GraphVAE: Towards Generation of Small Graphs Using Variational
  Autoencoders
GraphVAE: Towards Generation of Small Graphs Using Variational Autoencoders
M. Simonovsky
N. Komodakis
GNN
BDL
105
849
0
09 Feb 2018
Deeper Insights into Graph Convolutional Networks for Semi-Supervised
  Learning
Deeper Insights into Graph Convolutional Networks for Semi-Supervised Learning
Qimai Li
Zhichao Han
Xiao-Ming Wu
GNN
SSL
182
2,825
0
22 Jan 2018
Multi-Objective De Novo Drug Design with Conditional Graph Generative
  Model
Multi-Objective De Novo Drug Design with Conditional Graph Generative Model
Yibo Li
L. Zhang
Zhenming Liu
72
338
0
18 Jan 2018
GraphGAN: Graph Representation Learning with Generative Adversarial Nets
GraphGAN: Graph Representation Learning with Generative Adversarial Nets
Hongwei Wang
Jia Wang
Jialin Wang
Miao Zhao
Weinan Zhang
Fuzheng Zhang
Xing Xie
Minyi Guo
GNN
GAN
79
624
0
22 Nov 2017
Graph Attention Networks
Graph Attention Networks
Petar Velickovic
Guillem Cucurull
Arantxa Casanova
Adriana Romero
Pietro Lio
Yoshua Bengio
GNN
459
20,124
0
30 Oct 2017
Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network
Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network
Wengong Jin
Connor W. Coley
Regina Barzilay
Tommi Jaakkola
65
274
0
13 Sep 2017
Learning to Plan Chemical Syntheses
Learning to Plan Chemical Syntheses
Marwin H. S. Segler
Mike Preuss
M. Waller
74
1,371
0
14 Aug 2017
Attention Is All You Need
Attention Is All You Need
Ashish Vaswani
Noam M. Shazeer
Niki Parmar
Jakob Uszkoreit
Llion Jones
Aidan Gomez
Lukasz Kaiser
Illia Polosukhin
3DV
672
131,414
0
12 Jun 2017
PointNet++: Deep Hierarchical Feature Learning on Point Sets in a Metric
  Space
PointNet++: Deep Hierarchical Feature Learning on Point Sets in a Metric Space
C. Qi
L. Yi
Hao Su
Leonidas Guibas
3DPC
3DV
339
11,094
0
07 Jun 2017
Inductive Representation Learning on Large Graphs
Inductive Representation Learning on Large Graphs
William L. Hamilton
Z. Ying
J. Leskovec
477
15,218
0
07 Jun 2017
Retrosynthetic reaction prediction using neural sequence-to-sequence
  models
Retrosynthetic reaction prediction using neural sequence-to-sequence models
Bowen Liu
Bharath Ramsundar
Prasad Kawthekar
Jade Shi
Joseph Gomes
Quang Luu Nguyen
Stephen Ho
Jack L. Sloane
P. Wender
Vijay S. Pande
55
418
0
06 Jun 2017
CayleyNets: Graph Convolutional Neural Networks with Complex Rational
  Spectral Filters
CayleyNets: Graph Convolutional Neural Networks with Complex Rational Spectral Filters
Ron Levie
Federico Monti
Xavier Bresson
M. Bronstein
GNN
185
659
0
22 May 2017
Neural Message Passing for Quantum Chemistry
Neural Message Passing for Quantum Chemistry
Justin Gilmer
S. Schoenholz
Patrick F. Riley
Oriol Vinyals
George E. Dahl
582
7,441
0
04 Apr 2017
Modeling Relational Data with Graph Convolutional Networks
Modeling Relational Data with Graph Convolutional Networks
Michael Schlichtkrull
Thomas Kipf
Peter Bloem
Rianne van den Berg
Ivan Titov
Max Welling
GNN
183
4,812
0
17 Mar 2017
Grammar Variational Autoencoder
Grammar Variational Autoencoder
Matt J. Kusner
Brooks Paige
José Miguel Hernández-Lobato
BDL
DRL
77
841
0
06 Mar 2017
MoleculeNet: A Benchmark for Molecular Machine Learning
MoleculeNet: A Benchmark for Molecular Machine Learning
Zhenqin Wu
Bharath Ramsundar
Evan N. Feinberg
Joseph Gomes
C. Geniesse
Aneesh S. Pappu
K. Leswing
Vijay S. Pande
OOD
328
1,826
0
02 Mar 2017
Geometric deep learning on graphs and manifolds using mixture model CNNs
Geometric deep learning on graphs and manifolds using mixture model CNNs
Federico Monti
Davide Boscaini
Jonathan Masci
Emanuele Rodolà
Jan Svoboda
M. Bronstein
GNN
412
1,820
0
25 Nov 2016
Geometric deep learning: going beyond Euclidean data
Geometric deep learning: going beyond Euclidean data
M. Bronstein
Joan Bruna
Yann LeCun
Arthur Szlam
P. Vandergheynst
GNN
789
3,282
0
24 Nov 2016
Variational Graph Auto-Encoders
Variational Graph Auto-Encoders
Thomas Kipf
Max Welling
GNN
BDL
SSL
CML
145
3,584
0
21 Nov 2016
Low Data Drug Discovery with One-shot Learning
Low Data Drug Discovery with One-shot Learning
Han Altae-Tran
Bharath Ramsundar
Aneesh S. Pappu
Vijay S. Pande
89
686
0
10 Nov 2016
Variational Autoencoder for Deep Learning of Images, Labels and Captions
Variational Autoencoder for Deep Learning of Images, Labels and Captions
Yunchen Pu
Zhe Gan
Ricardo Henao
Xin Yuan
Chunyuan Li
Andrew Stevens
Lawrence Carin
BDL
CoGe
79
752
0
28 Sep 2016
SeqGAN: Sequence Generative Adversarial Nets with Policy Gradient
SeqGAN: Sequence Generative Adversarial Nets with Policy Gradient
Lantao Yu
Weinan Zhang
Jun Wang
Yong Yu
GAN
69
2,398
0
18 Sep 2016
Semi-Supervised Classification with Graph Convolutional Networks
Semi-Supervised Classification with Graph Convolutional Networks
Thomas Kipf
Max Welling
GNN
SSL
602
29,032
0
09 Sep 2016
node2vec: Scalable Feature Learning for Networks
node2vec: Scalable Feature Learning for Networks
Aditya Grover
J. Leskovec
186
10,863
0
03 Jul 2016
Convolutional Neural Networks on Graphs with Fast Localized Spectral
  Filtering
Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering
M. Defferrard
Xavier Bresson
P. Vandergheynst
GNN
333
7,648
0
30 Jun 2016
Faster Eigenvector Computation via Shift-and-Invert Preconditioning
Faster Eigenvector Computation via Shift-and-Invert Preconditioning
Dan Garber
Laurent Dinh
Chi Jin
Jascha Narain Sohl-Dickstein
Samy Bengio
Praneeth Netrapalli
Aaron Sidford
263
78
0
26 May 2016
Learning Convolutional Neural Networks for Graphs
Learning Convolutional Neural Networks for Graphs
Mathias Niepert
Mohamed Ahmed
Konstantin Kutzkov
GNN
SSL
135
2,154
0
17 May 2016
Group Equivariant Convolutional Networks
Group Equivariant Convolutional Networks
Taco S. Cohen
Max Welling
BDL
150
1,934
0
24 Feb 2016
Order Matters: Sequence to sequence for sets
Order Matters: Sequence to sequence for sets
Oriol Vinyals
Samy Bengio
M. Kudlur
BDL
191
950
0
19 Nov 2015
Convolutional Networks on Graphs for Learning Molecular Fingerprints
Convolutional Networks on Graphs for Learning Molecular Fingerprints
David Duvenaud
D. Maclaurin
J. Aguilera-Iparraguirre
Rafael Gómez-Bombarelli
Timothy D. Hirzel
Alán Aspuru-Guzik
Ryan P. Adams
GNN
215
3,350
0
30 Sep 2015
Deep Generative Image Models using a Laplacian Pyramid of Adversarial
  Networks
Deep Generative Image Models using a Laplacian Pyramid of Adversarial Networks
Emily L. Denton
Soumith Chintala
Arthur Szlam
Rob Fergus
GAN
90
2,241
0
18 Jun 2015
Deep Convolutional Networks on Graph-Structured Data
Deep Convolutional Networks on Graph-Structured Data
Mikael Henaff
Joan Bruna
Yann LeCun
GNN
155
1,587
0
16 Jun 2015
NICE: Non-linear Independent Components Estimation
NICE: Non-linear Independent Components Estimation
Laurent Dinh
David M. Krueger
Yoshua Bengio
DRL
BDL
121
2,258
0
30 Oct 2014
On the Properties of Neural Machine Translation: Encoder-Decoder
  Approaches
On the Properties of Neural Machine Translation: Encoder-Decoder Approaches
Kyunghyun Cho
B. V. Merrienboer
Dzmitry Bahdanau
Yoshua Bengio
AI4CE
AIMat
237
6,775
0
03 Sep 2014
DeepWalk: Online Learning of Social Representations
DeepWalk: Online Learning of Social Representations
Bryan Perozzi
Rami Al-Rfou
Steven Skiena
HAI
252
9,779
0
26 Mar 2014
Spectral Networks and Locally Connected Networks on Graphs
Spectral Networks and Locally Connected Networks on Graphs
Joan Bruna
Wojciech Zaremba
Arthur Szlam
Yann LeCun
GNN
209
4,874
0
21 Dec 2013
Auto-Encoding Variational Bayes
Auto-Encoding Variational Bayes
Diederik P. Kingma
Max Welling
BDL
439
16,940
0
20 Dec 2013
Kronecker Graphs: An Approach to Modeling Networks
Kronecker Graphs: An Approach to Modeling Networks
J. Leskovec
Deepayan Chakrabarti
Jon M. Kleinberg
Christos Faloutsos
Zoubin Ghahramani
96
1,073
0
29 Dec 2008
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