3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation

21 June 2016

Thomas Brox

Papers citing "3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation"

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Title
Cloud Detection Algorithm for Remote Sensing Images Using Fully Convolutional Neural Networks S. Mohajerani Thomas A. Krammer Parvaneh Saeedi 16 95 0 13 Oct 2018
CPNet: A Context Preserver Convolutional Neural Network for Detecting Shadows in Single RGB Images S. Mohajerani Parvaneh Saeedi 12 17 0 13 Oct 2018
A Gentle Introduction to Deep Learning in Medical Image Processing Andreas Maier Christopher Syben Tobias Lasser Christian Riess PINN 9 427 0 12 Oct 2018
Comparison of U-net-based Convolutional Neural Networks for Liver Segmentation in CT H. Meine G. Chlebus Mohsen Ghafoorian I. Endo A. Schenk SSeg MedIm 16 12 0 09 Oct 2018
Glioma Segmentation with Cascaded Unet Dmitrii Lachinov Evgeny Vasiliev Vadim Turlapov 18 54 0 09 Oct 2018
No New-Net Fabian Isensee Philipp Kickingereder Wolfgang Wick Martin Bendszus Klaus H. Maier-Hein SSeg 28 395 0 27 Sep 2018
Exclusive Independent Probability Estimation using Deep 3D Fully Convolutional DenseNets: Application to IsoIntense Infant Brain MRI Segmentation Seyed Raein Hashemi S. Prabhu Simon K. Warfield Ali Gholipour 3DV 24 6 0 21 Sep 2018
3D segmentation of mandible from multisectional CT scans by convolutional neural networks Bingjiang Qiu Jiapan Guo J. Kraeima R. Borra M. Witjes P. V. van Ooijen 23 9 0 18 Sep 2018
Multi Modal Convolutional Neural Networks for Brain Tumor Segmentation Mehmet Aygün Y. Sahin Gözde B. Ünal MedIm 16 21 0 17 Sep 2018
Deep learning to achieve clinically applicable segmentation of head and neck anatomy for radiotherapy Stanislav Nikolov Sam Blackwell Alexei Zverovitch R. Mendes Michelle Livne ... Mustafa Suleyman T. Back Ricky A. Sharma J. Ledsam Olaf Ronneberger 11 296 0 12 Sep 2018
Parallel Separable 3D Convolution for Video and Volumetric Data Understanding Felix Gonda D. Wei T. Parag Hanspeter Pfister 3DPC 12 19 0 11 Sep 2018
RealPoint3D: Point Cloud Generation from a Single Image with Complex Background Yukang Chen Qian Zhang Lisen Mu Chang Huang Gaofeng Meng Xinggang Wang 3DPC 21 11 0 08 Sep 2018
Computation of Total Kidney Volume from CT images in Autosomal Dominant Polycystic Kidney Disease using Multi-Task 3D Convolutional Neural Networks Deepak Keshwani Yoshiro Kitamura Yuanzhong Li MedIm 14 22 0 07 Sep 2018
3D Segmentation with Exponential Logarithmic Loss for Highly Unbalanced Object Sizes Ken C. L. Wong Mehdi Moradi Hui Tang T. Syeda-Mahmood 3DV SSeg 17 190 0 31 Aug 2018
Fully Dense UNet for 2D Sparse Photoacoustic Tomography Artifact Removal Steven Guan Amir A. Khan S. Sikdar P. Chitnis 36 405 0 31 Aug 2018
Image-based Survival Analysis for Lung Cancer Patients using CNNs Christoph Haarburger Philippe Weitz Oliver Rippel Dorit Merhof 28 32 0 29 Aug 2018
Task adapted reconstruction for inverse problems J. Adler Sebastian Lunz Olivier Verdier Carola-Bibiane Schönlieb Ozan Oktem 28 43 0 27 Aug 2018
Automatic 3D bi-ventricular segmentation of cardiac images by a shape-refined multi-task deep learning approach Jinming Duan Ghalib A. Bello Jo Schlemper Wenjia Bai T. Dawes C. Biffi A. de Marvao Georgia Doumou D. O’Regan Daniel Rueckert MedIm 14 5 0 26 Aug 2018
Organ at Risk Segmentation in Head and Neck CT Images by Using a Two-Stage Segmentation Framework Based on 3D U-Net Yueyue Wang Liang Zhao Zhijian Song Manning Wang 11 70 0 25 Aug 2018
Fully-Convolutional Point Networks for Large-Scale Point Clouds Dario Rethage Johanna Wald Jürgen Sturm Nassir Navab Federico Tombari 3DV 3DPC 17 182 0 21 Aug 2018
Holographic Visualisation of Radiology Data and Automated Machine Learning-based Medical Image Segmentation Lucian Trestioreanu 33 2 0 15 Aug 2018
DeepNeuro: an open-source deep learning toolbox for neuroimaging Andrew Beers James M. Brown Ken Chang K. Hoebel Elizabeth R Gerstner Bruce Rosen Jayashree Kalpathy-Cramer MedIm 9 38 0 14 Aug 2018
Automatic Airway Segmentation in chest CT using Convolutional Neural Networks Antonio Garcia-Uceda Juarez H. Tiddens M. de Bruijne 14 61 0 14 Aug 2018
3D Depthwise Convolution: Reducing Model Parameters in 3D Vision Tasks Rongtian Ye Fangyu Liu Liqiang Zhang MDE 11 46 0 05 Aug 2018
Deeply Self-Supervised Contour Embedded Neural Network Applied to Liver Segmentation Minyoung Chung Jingyu Lee Minkyung Lee Jeongjin Lee Y. Shin MedIm 13 27 0 02 Aug 2018
Recurrent neural networks for aortic image sequence segmentation with sparse annotations Wenjia Bai Hideaki Suzuki C. Qin G. Tarroni Ozan Oktay Paul M. Matthews Daniel Rueckert MedIm 20 112 0 01 Aug 2018
Tumor Delineation For Brain Radiosurgery by a ConvNet and Non-Uniform Patch Generation Egor Krivov V. Kostjuchenko A. Dalechina B. Shirokikh Gleb Makarchuk A. Denisenko A. Golanov Mikhail Belyaev MedIm 14 5 0 01 Aug 2018
A Two-Stream Mutual Attention Network for Semi-supervised Biomedical Segmentation with Noisy Labels Shaobo Min Xiao Chen Zhengjun Zha Feng Wu Yongdong Zhang 26 79 0 31 Jul 2018
Security and Privacy Issues in Deep Learning Ho Bae Jaehee Jang Dahuin Jung Hyemi Jang Heonseok Ha Hyungyu Lee Sungroh Yoon SILM MIACV 40 77 0 31 Jul 2018
RS-Net: Regression-Segmentation 3D CNN for Synthesis of Full Resolution Missing Brain MRI in the Presence of Tumours Raghav Mehta Tal Arbel MedIm 3DV 11 22 0 28 Jul 2018
MRI to FDG-PET: Cross-Modal Synthesis Using 3D U-Net For Multi-Modal Alzheimer's Classification Apoorva Sikka Skand Peri Deepti R. Bathula MedIm 14 34 0 26 Jul 2018
Towards a Deep Unified Framework for Nuclear Reactor Perturbation Analysis Fabio De Sousa Ribeiro Francesco Calivá D. Chionis A. Dokhane A. Mylonakis C. Demazière Georgios Leontidis Stefanos D. Kollias 30 23 0 26 Jul 2018
Ensemble of Multi-sized FCNs to Improve White Matter Lesion Segmentation Zhewei Wang Charles D. Smith Jundong Liu 21 11 0 24 Jul 2018
Combining Heterogeneously Labeled Datasets For Training Segmentation Networks J. Kemnitz Christian F. Baumgartner W. Wirth F. Eckstein Sebastian K. Eder E. Konukoglu 14 8 0 24 Jul 2018
3D Convolutional Neural Networks for Tumor Segmentation using Long-range 2D Context Pawel Mlynarski H. Delingette A. Criminisi N. Ayache MedIm 3DV 11 105 0 23 Jul 2018
Brain Tumor Segmentation and Tractographic Feature Extraction from Structural MR Images for Overall Survival Prediction Po-Yu Kao Thuyen Ngo Angela Zhang Jefferson W. Chen B. S. Manjunath 15 84 0 20 Jul 2018
A Strategy of MR Brain Tissue Images' Suggestive Annotation Based on Modified U-Net Yang Deng Yao Sun Yongpei Zhu Mingwang Zhu Wei Han Kehong Yuan 16 13 0 19 Jul 2018
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks Guotai Wang Wenqi Li Michael Aertsen Jan Deprest Sebastien Ourselin Tom Kamiel Magda Vercauteren UQCV MedIm OOD 49 582 0 19 Jul 2018
Deep Exemplar-based Colorization Mingming He Dongdong Chen Jing Liao Pedro Sander Lu Yuan 20 302 0 17 Jul 2018
Prostate Segmentation using 2D Bridged U-net Wanli Chen Yue Zhang Junjun He Yu Qiao Yifan Chen Hongjian Shi Xiaoying Tang SSeg 3DV 14 32 0 12 Jul 2018
A Generic Approach to Lung Field Segmentation from Chest Radiographs using Deep Space and Shape Learning Awais Mansoor Juan J. Cerrolaza Geovanny F. Perez E. Biggs K. Okada G. Nino M. Linguraru 9 26 0 11 Jul 2018
Multi-Scale Coarse-to-Fine Segmentation for Screening Pancreatic Ductal Adenocarcinoma Zhuotun Zhu Yingda Xia Lingxi Xie Elliot K. Fishman Alan Yuille MedIm 19 93 0 09 Jul 2018
Tangent Convolutions for Dense Prediction in 3D Maxim Tatarchenko Jaesik Park V. Koltun Qian-Yi Zhou 3DV 3DPC MDE 22 542 0 06 Jul 2018
Deep Sequential Segmentation of Organs in Volumetric Medical Scans A. A. Novikov David Major M. Wimmer Dimitrios Lenis Katja Bühler 26 69 0 06 Jul 2018
TFLMS: Large Model Support in TensorFlow by Graph Rewriting Tung D. Le Haruki Imai Yasushi Negishi K. Kawachiya GNN 10 45 0 05 Jul 2018
Learning Personalized Representation for Inverse Problems in Medical Imaging Using Deep Neural Network Kuang Gong Kyungsang Kim Jianan Cui Ning Guo C. Catana J. Qi Quanzheng Li MedIm 16 6 0 04 Jul 2018
HAMLET: Hierarchical Harmonic Filters for Learning Tracts from Diffusion MRI M. Reisert V. Coenen C. Kaller K. Egger Henrik Skibbe MedIm 14 13 0 03 Jul 2018
3D RoI-aware U-Net for Accurate and Efficient Colorectal Tumor Segmentation Yijie Huang Qi Dou Zixian Wang Li-Zhi Liu Ying Jin Chaozhuo Li Lisheng Wang Hao Chen R. Xu 12 57 0 27 Jun 2018
Automatic segmentation of prostate zones Germonda Mooij Ines Bagulho Henkjan Huisman MedIm 21 15 0 19 Jun 2018
Kid-Net: Convolution Networks for Kidney Vessels Segmentation from CT-Volumes Ahmed Taha P. Lo Junning Li T. Zhao SSeg 3DPC 17 57 0 18 Jun 2018