Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks

19 July 2018

Guotai Wang

Wenqi Li

Michael Aertsen

Jan Deprest

Sebastien Ourselin

Tom Kamiel Magda Vercauteren

Papers citing "Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks"

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Title
Steerable Equivariant Representation Learning Sangnie Bhardwaj Willie McClinton Tongzhou Wang Guillaume Lajoie Chen Sun Phillip Isola Dilip Krishnan OOD LLMSV 34 5 0 22 Feb 2023
Test-Time Distribution Normalization for Contrastively Learned Vision-language Models Yi Zhou Juntao Ren Fengyu Li Ramin Zabih Ser-Nam Lim VLM 39 14 0 22 Feb 2023
Likelihood Annealing: Fast Calibrated Uncertainty for Regression Uddeshya Upadhyay Jae Myung Kim Cordelia Schmidt Bernhard Schölkopf Zeynep Akata BDL UQCV 26 1 0 21 Feb 2023
A Review of Uncertainty Estimation and its Application in Medical Imaging K. Zou Zhihao Chen Xuedong Yuan Xiaojing Shen Meng Wang Huazhu Fu UQCV 49 85 0 16 Feb 2023
Uncertainty-Aware AB3DMOT by Variational 3D Object Detection Illia Oleksiienko Alexandros Iosifidis 3DPC 33 1 0 12 Feb 2023
Variational Voxel Pseudo Image Tracking Illia Oleksiienko Paraskevi Nousi Nikolaos Passalis Anastasios Tefas Alexandros Iosifidis 24 1 0 12 Feb 2023
Generalized Uncertainty of Deep Neural Networks: Taxonomy and Applications Chengyu Dong OOD UQCV BDL AI4CE 39 0 0 02 Feb 2023
Harmonizing Flows: Unsupervised MR harmonization based on normalizing flows Farzad Beizaee Christian Desrosiers Gregory A. Lodygensky Jose Dolz MedIm 19 6 0 27 Jan 2023
TAAL: Test-time Augmentation for Active Learning in Medical Image Segmentation Mélanie Gaillochet Christian Desrosiers H. Lombaert 19 11 0 16 Jan 2023
Does image resolution impact chest X-ray based fine-grained Tuberculosis-consistent lesion segmentation? S. Rajaraman Feng Yang Ghada Zamzmi Z. Xue Sameer Kiran Antani 26 0 0 10 Jan 2023
Towards Reliable Medical Image Segmentation by utilizing Evidential Calibrated Uncertainty K. Zou Yidi Chen Ling Huang Xuedong Yuan Xiaojing Shen Meng Wang Rick Siow Mong Goh Yong-Jin Liu Huazhu Fu UQCV 28 4 0 01 Jan 2023
A Survey of Mix-based Data Augmentation: Taxonomy, Methods, Applications, and Explainability Chengtai Cao Fan Zhou Yurou Dai Jianping Wang Kunpeng Zhang AAML 28 28 0 21 Dec 2022
TMS-Net: A Segmentation Network Coupled With A Run-time Quality Control Method For Robust Cardiac Image Segmentation F. Uslu Anil A. Bharath 39 14 0 21 Dec 2022
Modeling Multimodal Aleatoric Uncertainty in Segmentation with Mixture of Stochastic Experts Zhitong Gao Yucong Chen Chuyu Zhang Xuming He UQCV 27 5 0 14 Dec 2022
Solving Sample-Level Out-of-Distribution Detection on 3D Medical Images Daria Frolova A. Vasiliuk Mikhail Belyaev B. Shirokikh OOD 29 1 0 13 Dec 2022
An Exploratory Study of AI System Risk Assessment from the Lens of Data Distribution and Uncertainty Zhijie Wang Yuheng Huang Lei Ma Haruki Yokoyama Susumu Tokumoto Kazuki Munakata 29 4 0 13 Dec 2022
Test-Time Mixup Augmentation for Data and Class-Specific Uncertainty Estimation in Deep Learning Image Classification Han S. Lee Haeil Lee H. Hong Junmo Kim UQCV 25 0 0 01 Dec 2022
A Knowledge-based Learning Framework for Self-supervised Pre-training Towards Enhanced Recognition of Biomedical Microscopy Images Wei Chen Chen Li Dan Chen Xin Luo MedIm SSL 38 12 0 27 Nov 2022
Benchmarking Bayesian Deep Learning on Diabetic Retinopathy Detection Tasks Neil Band Tim G. J. Rudner Qixuan Feng Angelos Filos Zachary Nado Michael W. Dusenberry Ghassen Jerfel Dustin Tran Y. Gal OOD UQCV BDL 29 50 0 23 Nov 2022
Disentangled Uncertainty and Out of Distribution Detection in Medical Generative Models Kumud Lakara Matias Valdenegro-Toro UQCV OOD 30 1 0 11 Nov 2022
UATTA-ENS: Uncertainty Aware Test Time Augmented Ensemble for PIRC Diabetic Retinopathy Detection Pratinav Seth Adil Mehmood Khan Ananya Gupta Saurabh Mishra Akshat Bhandhari 31 0 0 06 Nov 2022
MONAI: An open-source framework for deep learning in healthcare M. Jorge Cardoso Wenqi Li Richard Brown Nic Ma E. Kerfoot ... Klaus H. Maier-Hein S. Aylward Prerna Dogra Sebastien Ourselin Andrew Feng 60 483 0 04 Nov 2022
Bayesian Counterfactual Mean Embeddings and Off-Policy Evaluation Diego Martinez-Taboada Dino Sejdinovic CML OffRL 25 0 0 02 Nov 2022
Private and Reliable Neural Network Inference Nikola Jovanović Marc Fischer Samuel Steffen Martin Vechev 22 14 0 27 Oct 2022
Uncertainty Estimates of Predictions via a General Bias-Variance Decomposition Sebastian G. Gruber Florian Buettner PER UQCV UD 213 11 0 21 Oct 2022
Quantifying U-Net Uncertainty in Multi-Parametric MRI-based Glioma Segmentation by Spherical Image Projection Zhenyu Yang Kyle J. Lafata E. Vaios Zongsheng Hu Trey C Mullikin F. Yin Cong Wang 43 11 0 12 Oct 2022
Trustworthy clinical AI solutions: a unified review of uncertainty quantification in deep learning models for medical image analysis Benjamin Lambert Florence Forbes A. Tucholka Senan Doyle Harmonie Dehaene M. Dojat 34 80 0 05 Oct 2022
Recycling Scraps: Improving Private Learning by Leveraging Intermediate Checkpoints Virat Shejwalkar Arun Ganesh Rajiv Mathews Om Thakkar Abhradeep Thakurta 34 0 0 04 Oct 2022
Partial annotations for the segmentation of large structures with low annotation cost Bella Specktor-Fadida Daphna Link-Sourani Liat Ben Sira Elka Miller D. Ben Bashat Leo Joskowicz 30 2 0 25 Sep 2022
Rethinking Missing Data: Aleatoric Uncertainty-Aware Recommendation Chenxu Wang Fuli Feng Yang Zhang Qifan Wang Xu Hu Xiangnan He 52 8 0 22 Sep 2022
Uncertainty Aware Multitask Pyramid Vision Transformer For UAV-Based Object Re-Identification Syeda Nyma Ferdous Xin Li Siwei Lyu 78 5 0 19 Sep 2022
Self-supervised Learning for Panoptic Segmentation of Multiple Fruit Flower Species Abubakar Siddique A. Tabb Henry Medeiros SSL 21 8 0 10 Sep 2022
Calibrating Segmentation Networks with Margin-based Label Smoothing Balamurali Murugesan Bingyuan Liu Adrian Galdran Ismail Ben Ayed Jose Dolz UQCV 32 0 0 09 Sep 2022
Ensemble uncertainty as a criterion for dataset expansion in distinct bone segmentation from upper-body CT images Eva Schnider Antal Huck M. Toranelli G. Rauter A. Zam M. Müller-Gerbl Philippe C. Cattin 25 1 0 19 Aug 2022
Longitudinal Prediction of Postnatal Brain Magnetic Resonance Images via a Metamorphic Generative Adversarial Network Yunzhi Huang Sahar Ahmad Luyi Han Shuai Wang Zhengwang Wu W. Lin Gang Li Liwen Wang P. Yap MedIm 29 0 0 09 Aug 2022
Seamless Iterative Semi-Supervised Correction of Imperfect Labels in Microscopy Images Marawan Elbatel Christina Bornberg Manasi Kattel E. Almar Claudio Marrocco Alessandro Bria 26 3 0 05 Aug 2022
Distance-based detection of out-of-distribution silent failures for Covid-19 lung lesion segmentation Jiamin Liang Yuhao Huang Haoming Li Shuangchi He Xindi Hu Zejian Chen Isabel Kaltenborn Dong Ni OOD 31 42 0 05 Aug 2022
Automatic Segmentation of the Placenta in BOLD MRI Time Series S. M. Abulnaga Sean I. Young Katherine I. Hobgood Eileen Pan Clinton Jia Wang P. E. Grant Esra Abaci Turk Polina Golland 36 6 0 04 Aug 2022
Improved post-hoc probability calibration for out-of-domain MRI segmentation Cheng Ouyang Shuo Wang Cen Chen Zeju Li Wenjia Bai Bernhard Kainz Daniel Rueckert UQCV MedIm 21 4 0 04 Aug 2022
One Simple Trick to Fix Your Bayesian Neural Network Piotr Tempczyk Ksawery Smoczyñski Philip Smolenski-Jensen Marek Cygan BDL MLT 24 0 0 26 Jul 2022
BayesCap: Bayesian Identity Cap for Calibrated Uncertainty in Frozen Neural Networks Uddeshya Upadhyay Shyamgopal Karthik Yanbei Chen Massimiliano Mancini Zeynep Akata UQCV BDL 35 22 0 14 Jul 2022
Collaborative Uncertainty Benefits Multi-Agent Multi-Modal Trajectory Forecasting Bohan Tang Yiqi Zhong Chenxin Xu Wei Wu Ulrich Neumann Yanfeng Wang Ya Zhang Siheng Chen 38 9 0 11 Jul 2022
TFCNs: A CNN-Transformer Hybrid Network for Medical Image Segmentation Zihan Li Dihan Li Cangbai Xu Wei-Chien Wang Qingqi Hong Qingde Li Jie Tian ViT MedIm 35 46 0 07 Jul 2022
Slice-by-slice deep learning aided oropharyngeal cancer segmentation with adaptive thresholding for spatial uncertainty on FDG PET and CT images A. De Biase N. Sijtsema L. V. van Dijk J. Langendijk P. V. van Ooijen 48 19 0 04 Jul 2022
Placenta Segmentation in Ultrasound Imaging: Addressing Sources of Uncertainty and Limited Field-of-View V. Zimmer A. Gómez E. Skelton Robert Wright G. Wheeler ... Jacqueline Matthew Bernhard Kainz Daniel Rueckert Joseph V. Hajnal Julia A. Schnabel 33 22 0 29 Jun 2022
Improved Text Classification via Test-Time Augmentation H. Lu Divya Shanmugam Harini Suresh John Guttag ViT 33 11 0 27 Jun 2022
Influence of uncertainty estimation techniques on false-positive reduction in liver lesion detection Ishaan Bhat J. Pluim M. Viergever Hugo J. Kuijf MedIm 21 4 0 22 Jun 2022
BSM loss: A superior way in modeling aleatory uncertainty of fine_grained classification Shuang Ge Kehong Yuan Maokun Han Desheng Sun Huabin Zhang Qiongyu Ye UQCV 20 0 0 09 Jun 2022
A Verification Framework for Certifying Learning-Based Safety-Critical Aviation Systems Ali Baheri Hao Ren B. Johnson Pouria Razzaghi Peng Wei 21 5 0 09 May 2022
Deep Learning Framework for Real-time Fetal Brain Segmentation in MRI Razieh Faghihpirayesh Davood Karimi Deniz Erdogmus Ali Gholipour 9 7 0 02 May 2022