Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation

18 March 2016

Konstantinos Kamnitsas

Papers citing "Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation"

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MyoPS-Net: Myocardial Pathology Segmentation with Flexible Combination of Multi-Sequence CMR Images Junyi Qiu Lei Li Sihan Wang Kecheng Zhang Yinyin Chen Shan Yang Xiahai Zhuang 23 28 0 06 Nov 2022
Diversity-Promoting Ensemble for Medical Image Segmentation Mariana-Iuliana Georgescu Radu Tudor Ionescu A. Miron 32 19 0 22 Oct 2022
Deep Learning in Single-Cell Analysis Dylan Molho Jiayuan Ding Zhaoheng Li Haifang Wen Wenzhuo Tang ... P. Danaher Robert Yang Y. Lei Yuying Xie Jiliang Tang 28 22 0 22 Oct 2022
Memory transformers for full context and high-resolution 3D Medical Segmentation Loic Themyr Clément Rambour Nicolas Thome Toby Collins Alexandre Hostettler ViT MedIm 34 4 0 11 Oct 2022
Artificial intelligence-based locoregional markers of brain peritumoral microenvironment Zahra Riahi Samani D. Parker H. Akbari Spyridon Bakas R. Wolf S. Brem R. Verma 15 8 0 29 Aug 2022
Deep learning for automatic head and neck lymph node level delineation provides expert-level accuracy T. Weissmann Yixing Huang Stefan Fischer J. Roesch S. Mansoorian ... H. Iro S. Semrau Christoph Bert R. Fietkau F. Putz 26 27 0 28 Aug 2022
Analyzing Deep Learning Based Brain Tumor Segmentation with Missing MRI Modalities Benteng Ma Yushi Wang Shen Wang 11 0 0 06 Aug 2022
A Transformer-based Neural Language Model that Synthesizes Brain Activation Maps from Free-Form Text Queries G. Ngo Minh Le Nguyen Nancy F. Chen M. Sabuncu MedIm 33 7 0 24 Jul 2022
Brain MRI study for glioma segmentation using convolutional neural networks and original post-processing techniques with low computational demand José Gerardo Suárez-García E. Moreno-Barbosa B. D. C. Alonso 27 0 0 15 Jul 2022
Automated Detection of Label Errors in Semantic Segmentation Datasets via Deep Learning and Uncertainty Quantification Matthias Rottmann Marco Reese UQCV 28 22 0 13 Jul 2022
Is the U-Net Directional-Relationship Aware? M. Riva Pietro Gori Florian Yger Isabelle Bloch 16 1 0 06 Jul 2022
Asymmetry Disentanglement Network for Interpretable Acute Ischemic Stroke Infarct Segmentation in Non-Contrast CT Scans Haomiao Ni Yuan Xue K. Wong John Volpi Stephen T. C. Wong James Z. Wang Xiaolei Huang 28 16 0 30 Jun 2022
A Review of Causality for Learning Algorithms in Medical Image Analysis Athanasios Vlontzos Daniel Rueckert Bernhard Kainz OOD 40 17 0 11 Jun 2022
Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative and Post-Recurrence Brain Tumor MRI Scans Tony C. W. Mok Albert C. S. Chung 20 23 0 08 Jun 2022
What do we learn? Debunking the Myth of Unsupervised Outlier Detection Cosmin I. Bercea Daniel Rueckert Julia A. Schnabel OODD 19 5 0 08 Jun 2022
EVAC+: Multi-scale V-net with Deep Feature CRF Layers for Brain Extraction Jong Sung Park S. Fadnavis Eleftherios Garyfallidis 42 0 0 06 Jun 2022
H-EMD: A Hierarchical Earth Mover's Distance Method for Instance Segmentation Peixian Liang Yizhe Zhang Yifan Ding Jianxu Chen C. S. Madukoma Tim Weningerc J. Shrout Danny Chen 16 9 0 02 Jun 2022
MISSU: 3D Medical Image Segmentation via Self-distilling TransUNet Nan Wang Shaohui Lin Xiaoxiao Li Ke Li Yunhang Shen Yue Gao Lizhuang Ma ViT MedIm 49 33 0 02 Jun 2022
CORPS: Cost-free Rigorous Pseudo-labeling based on Similarity-ranking for Brain MRI Segmentation C. T. Sari Sila Kurugol O. Afacan Simon K. Warfield 23 0 0 19 May 2022
Leveraging Global Binary Masks for Structure Segmentation in Medical Images M. Kazemimoghadam Zi Yang Lin Ma Mingli Chen Weiguo Lu X. Gu 29 1 0 13 May 2022
M2R2: Missing-Modality Robust emotion Recognition framework with iterative data augmentation Ning Wang 23 13 0 05 May 2022
Continual Learning for Peer-to-Peer Federated Learning: A Study on Automated Brain Metastasis Identification Yixing Huang Christoph Bert Stefan Fischer Manuel Schmidt Arnd Dörfler Andreas Maier R. Fietkau F. Putz FedML CLL OOD MedIm 36 17 0 26 Apr 2022
Class Balanced PixelNet for Neurological Image Segmentation Mobarakol Islam Hongliang Ren SSeg 12 7 0 23 Apr 2022
Federated Learning Enables Big Data for Rare Cancer Boundary Detection Sarthak Pati Ujjwal Baid Brandon Edwards Micah J. Sheller Shih-Han Wang ... Prashant Shah Bjoern H. Menze J. Barnholtz-Sloan Jason Martin Spyridon Bakas FedML AI4CE 26 207 0 22 Apr 2022
Few-Shot Transfer Learning to improve Chest X-Ray pathology detection using limited triplets A. Bhimireddy J. L. Burns S. Purkayastha J. Gichoya LM&MA MedIm 9 2 0 16 Apr 2022
Negligible effect of brain MRI data preprocessing for tumor segmentation E. Kondrateva Polina Druzhinina A. Dalechina S. Zolotova A. Golanov B. Shirokikh Mikhail Belyaev Anvar Kurmukov 34 3 0 11 Apr 2022
Histogram of Oriented Gradients Meet Deep Learning: A Novel Multi-task Deep Network for Medical Image Semantic Segmentation Binod Bhattarai Ronast Subedi Rebati Gaire E. Vazquez Danail Stoyanov OOD 16 43 0 02 Apr 2022
Medical Image Segmentation on MRI Images with Missing Modalities: A Review Reza Azad Nika Khosravi Mohammad Dehghanmanshadi Julien Cohen-Adad Dorit Merhof 32 38 0 11 Mar 2022
Machine Learning Applications in Lung Cancer Diagnosis, Treatment and Prognosis Yawei Li Xin Wu P. Yang Guoqian Jiang Yuan Luo AI4CE 30 2 0 05 Mar 2022
Robust Segmentation of Brain MRI in the Wild with Hierarchical CNNs and no Retraining Benjamin Billot Magdamo Colin S. Arnold Sudeshna Das Juan Eugenio Iglesias OOD 23 11 0 03 Mar 2022
Multi-Task Multi-Scale Learning For Outcome Prediction in 3D PET Images Amine Amyar R. Modzelewski P. Vera V. Morard S. Ruan MedIm 18 13 0 01 Mar 2022
Augmentation based unsupervised domain adaptation Mauricio Orbes-Arteaga Thomas Varsavsky Lauge Sørensen Mads Nielsen A. Pai Sebastien Ourselin Marc Modat Jorge Cardoso OOD 27 3 0 23 Feb 2022
An overview of deep learning in medical imaging I. Haq VLM 10 5 0 17 Feb 2022
HNF-Netv2 for Brain Tumor Segmentation using multi-modal MR Imaging Haozhe Jia Chao Bai Weidong (Tom) Cai Heng-Chiao Huang Yong-quan Xia 13 9 0 10 Feb 2022
Contrastive and Selective Hidden Embeddings for Medical Image Segmentation Zhuowei Li Zihao Liu Zhiqiang Hu Qing Xia Ruiqin Xiong Shaoting Zhang Dimitris N. Metaxas Tingting Jiang SSL 35 8 0 21 Jan 2022
AWSnet: An Auto-weighted Supervision Attention Network for Myocardial Scar and Edema Segmentation in Multi-sequence Cardiac Magnetic Resonance Images Kaini Wang Xin Yang Juzheng Miao Lei Li Jing Yao Ping Zhou Wufeng Xue Guangquan Zhou Xiahai Zhuang Dong Ni 23 41 0 14 Jan 2022
Cross-Modality Deep Feature Learning for Brain Tumor Segmentation Dingwen Zhang Guohai Huang Qiang Zhang Jungong Han Junwei Han Yizhou Yu 25 217 0 07 Jan 2022
Advancing 3D Medical Image Analysis with Variable Dimension Transform based Supervised 3D Pre-training Shu Zhen Zhang Zihao Li Hong-Yu Zhou Jiechao Ma Yizhou Yu 35 11 0 05 Jan 2022
Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Images Ali Hatamizadeh V. Nath Yucheng Tang Dong Yang H. Roth Daguang Xu ViT MedIm 48 1,060 0 04 Jan 2022
External Attention Assisted Multi-Phase Splenic Vascular Injury Segmentation with Limited Data Yuyin Zhou D. Dreizin Yan Wang Fengze Liu Wei Shen Alan Yuille 20 16 0 04 Jan 2022
D-Former: A U-shaped Dilated Transformer for 3D Medical Image Segmentation YiXuan Wu Kuan-Yu Liao Jintai Chen Jinhong Wang Danny Chen Honghao Gao Jian Wu ViT MedIm 26 107 0 03 Jan 2022
Recurrent Feature Propagation and Edge Skip-Connections for Automatic Abdominal Organ Segmentation Zefan Yang Di Lin Dong Ni Yi Wang MedIm 23 6 0 02 Jan 2022
Deep learning for brain metastasis detection and segmentation in longitudinal MRI data Yixing Huang Christoph Bert P. Sommer Benjamin Frey U. Gaipl ... Manuel Schmidt Arnd Dörfler Andreas Maier R. Fietkau F. Putz 19 41 0 22 Dec 2021
Adaptive Contrast for Image Regression in Computer-Aided Disease Assessment Weihang Dai Xuelong Li W. H. Chiu Michael D Kuo Kwang-Ting Cheng MedIm 36 21 0 22 Dec 2021
QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Scores and Benchmarking Results Raghav Mehta Angelos Filos Ujjwal Baid C. Sako Richard McKinley ... Christos Davatzikos Bjoern H. Menze Spyridon Bakas Y. Gal Tal Arbel UQCV 17 44 0 19 Dec 2021
FastSurferVINN: Building Resolution-Independence into Deep Learning Segmentation Methods -- A Solution for HighRes Brain MRI Leonie Henschel David Kügler M. Reuter 38 42 0 17 Dec 2021
Local contrastive loss with pseudo-label based self-training for semi-supervised medical image segmentation K. Chaitanya Ertunc Erdil Neerav Karani E. Konukoglu SSL 15 120 0 17 Dec 2021
Ensemble CNN Networks for GBM Tumors Segmentation using Multi-parametric MRI Ramy A. Zeineldin Mohamed E. Karar Franziska Mathis-Ullrich Oliver Burgert 13 9 0 13 Dec 2021
Extending nn-UNet for brain tumor segmentation Huan Minh Luu Sung-Hong Park 32 102 0 09 Dec 2021
Hybrid guiding: A multi-resolution refinement approach for semantic segmentation of gigapixel histopathological images André Pedersen Erik Smistad T. V. Rise V. G. Dale H. S. Pettersen T. Nordmo D. Bouget Ingerid Reinertsen Marit Valla 27 3 0 07 Dec 2021