Multimodal Pre-Training Model for Sequence-based Prediction of
Protein-Protein Interaction

Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction

9 December 2021

Yang Xue

Xiaomin Fang

Fan Wang

Papers citing "Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction"

12 / 12 papers shown

Title
A Survey of Geometric Graph Neural Networks: Data Structures, Models and Applications Jiaqi Han Jiacheng Cen Liming Wu Zongzhao Li Xiangzhe Kong ... Zhewei Wei Deli Zhao Yu Rong Wenbing Huang Wenbing Huang AI4CE 99 23 0 01 Mar 2024
Pre-training Protein Language Models with Label-Agnostic Binding Pairs Enhances Performance in Downstream Tasks Modestas Filipavicius Matteo Manica Joris Cadow María Rodríguez Martínez 129 14 0 05 Dec 2020
Pre-training of Graph Neural Network for Modeling Effects of Mutations on Protein-Protein Binding Affinity Xianggen Liu Yunan Luo Sen Song Jian-wei Peng 22 103 0 28 Aug 2020
ProtTrans: Towards Cracking the Language of Life's Code Through Self-Supervised Deep Learning and High Performance Computing Ahmed Elnaggar M. Heinzinger Christian Dallago Ghalia Rehawi Yu Wang ... Tamas B. Fehér Christoph Angerer Martin Steinegger D. Bhowmik B. Rost DRL 52 932 0 13 Jul 2020
Pre-Training of Deep Bidirectional Protein Sequence Representations with Structural Information Seonwoo Min Seunghyun Park Siwon Kim Hyun-Soo Choi Byunghan Lee Sungroh Yoon SSL 36 62 0 25 Nov 2019
Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformer Colin Raffel Noam M. Shazeer Adam Roberts Katherine Lee Sharan Narang Michael Matena Yanqi Zhou Wei Li Peter J. Liu AIMat 328 19,824 0 23 Oct 2019
VL-BERT: Pre-training of Generic Visual-Linguistic Representations Weijie Su Xizhou Zhu Yue Cao Bin Li Lewei Lu Furu Wei Jifeng Dai VLM MLLM SSL 126 1,657 0 22 Aug 2019
Evaluating Protein Transfer Learning with TAPE Roshan Rao Nicholas Bhattacharya Neil Thomas Yan Duan Xi Chen John F. Canny Pieter Abbeel Yun S. Song SSL 81 786 0 19 Jun 2019
Learning protein sequence embeddings using information from structure Tristan Bepler Bonnie Berger 53 286 0 22 Feb 2019
BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding Jacob Devlin Ming-Wei Chang Kenton Lee Kristina Toutanova VLM SSL SSeg 1.1K 93,936 0 11 Oct 2018
Deep contextualized word representations Matthew E. Peters Mark Neumann Mohit Iyyer Matt Gardner Christopher Clark Kenton Lee Luke Zettlemoyer NAI 132 11,520 0 15 Feb 2018
Neural Machine Translation of Rare Words with Subword Units Rico Sennrich Barry Haddow Alexandra Birch 160 7,683 0 31 Aug 2015