Self-Supervised Pre-Training of Swin Transformers for 3D Medical Image Analysis

29 November 2021

Wenqi Li

Bennett Landman

Papers citing "Self-Supervised Pre-Training of Swin Transformers for 3D Medical Image Analysis"

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Title
VIViT: Variable-Input Vision Transformer Framework for 3D MR Image Segmentation B. K. Das Ajay Singh Gengyan Zhao Han Liu Thomas J. Re D. Comaniciu Eli Gibson Andreas K. Maier ViT MedIm 26 0 0 13 May 2025
Calibration and Uncertainty for multiRater Volume Assessment in multiorgan Segmentation (CURVAS) challenge results Meritxell Riera-Marin S. Ko Julia Rodriguez-Comas Matthias Stefan May Zhaohong Pan ... Anton Aubanell Andreu Antolin Javier Garcia-Lopez M. A. G. Ballester Adrian Galdran UQCV 43 0 0 13 May 2025
GaMNet: A Hybrid Network with Gabor Fusion and NMamba for Efficient 3D Glioma Segmentation Chengwei Ye H. Zhang Yufei Lin Kangsheng Wang Linuo Xu Shuyan Liu MedIm 127 0 0 08 May 2025
Uncertainty-Guided Coarse-to-Fine Tumor Segmentation with Anatomy-Aware Post-Processing I. Isler David Mohaisen C. Lisle D. Turgut Ulas Bagci 26 0 0 16 Apr 2025
TextDiffSeg: Text-guided Latent Diffusion Model for 3d Medical Images Segmentation Kangbo Ma MedIm 27 0 0 16 Apr 2025
Dynamic Importance in Diffusion U-Net for Enhanced Image Synthesis Xi Wang Ziqi He Yang Zhou 37 0 0 04 Apr 2025
AutoSSVH: Exploring Automated Frame Sampling for Efficient Self-Supervised Video Hashing Niu Lian Jun Li Jinpeng Wang Ruisheng Luo Yaowei Wang Shu-Tao Xia Bin Chen 113 0 0 04 Apr 2025
MedCL: Learning Consistent Anatomy Distribution for Scribble-supervised Medical Image Segmentation Ke Zhang Vishal M. Patel 49 0 0 28 Mar 2025
Foundation Model for Whole-Heart Segmentation: Leveraging Student-Teacher Learning in Multi-Modal Medical Imaging Abdul Qayyum Moona Mazher Devran Ugurlu J. Solís-Lemus C. Rodero Steven A Niederer 42 0 0 24 Mar 2025
Downstream Analysis of Foundational Medical Vision Models for Disease Progression Basar Demir Soumitri Chattopadhyay Thomas Hastings Greer Boqi Chen Marc Niethammer MedIm 48 0 0 21 Mar 2025
MM-UNet: Meta Mamba UNet for Medical Image Segmentation Bin Xie Yan Yan Gady Agam Mamba 59 0 0 21 Mar 2025
MAST-Pro: Dynamic Mixture-of-Experts for Adaptive Segmentation of Pan-Tumors with Knowledge-Driven Prompts Runqi Meng S. Song Pengfei Jin Y. Oh L. Teng ... L. Chen X. Li Quanzheng Li Ning Guo Dinggang Shen 51 0 0 18 Mar 2025
Towards Universal Text-driven CT Image Segmentation Yuheng Li Yuxiang Lai Maria Thor Deborah Marshall Zachary Buchwald D. Yu Xiaofeng Yang MedIm VLM 52 2 0 08 Mar 2025
Learning 3D Medical Image Models From Brain Functional Connectivity Network Supervision For Mental Disorder Diagnosis Xingcan Hu Wei Wang Li Xiao 40 0 0 06 Mar 2025
COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentation Gen Shi Hui Zhang Jie Tian Mamba 66 0 0 04 Mar 2025
Primus: Enforcing Attention Usage for 3D Medical Image Segmentation Tassilo Wald Saikat Roy Fabian Isensee Constantin Ulrich Sebastian Ziegler D. Trofimova Raphael Stock Michael Baumgartner Gregor Köhler Klaus H. Maier-Hein ViT MedIm 42 1 0 03 Mar 2025
Cross-Attention Fusion of MRI and Jacobian Maps for Alzheimer's Disease Diagnosis Shijia Zhang Xiyu Ding Brian Caffo Junyu Chen Cindy Zhang Hadi Kharrazi Zheyu Wang MedIm 29 0 0 01 Mar 2025
LesionLocator: Zero-Shot Universal Tumor Segmentation and Tracking in 3D Whole-Body Imaging Maximilian R. Rokuss Yannick Kirchhoff Seval Akbal Balint Kovacs Saikat Roy Constantin Ulrich Tassilo Wald Lukas T. Rotkopf H. Schlemmer Klaus H. Maier-Hein 3DV MedIm 39 1 0 28 Feb 2025
E2ENet: Dynamic Sparse Feature Fusion for Accurate and Efficient 3D Medical Image Segmentation Boqian Wu Q. Xiao Shiwei Liu Lu Yin Mykola Pechenizkiy D. Mocanu M. V. Keulen Elena Mocanu MedIm 53 4 0 20 Feb 2025
Brain-Adapter: Enhancing Neurological Disorder Analysis with Adapter-Tuning Multimodal Large Language Models Jing Zhang Xiaowei Yu Yanjun Lyu Lu Zhang Tong Chen Chao-Yang Cao Yan Zhuang Minheng Chen Tianming Liu D. Zhu 32 2 0 28 Jan 2025
Unified 3D MRI Representations via Sequence-Invariant Contrastive Learning Liam Chalcroft Jenny Crinion Cathy J. Price John Ashburner 136 0 0 21 Jan 2025
A generalizable 3D framework and model for self-supervised learning in medical imaging Tony Xu Sepehr Hosseini Chris Anderson Anthony Rinaldi Rahul G. Krishnan Anne L. Martel Maged Goubran MedIm 45 3 0 20 Jan 2025
How Well Do Supervised 3D Models Transfer to Medical Imaging Tasks? Wenxuan Li Alan L. Yuille Zongwei Zhou MedIm 43 8 0 20 Jan 2025
PointVoxelFormer -- Reviving point cloud networks for 3D medical imaging Mattias Paul Heinrich 3DPC 37 0 0 23 Dec 2024
TS-SatFire: A Multi-Task Satellite Image Time-Series Dataset for Wildfire Detection and Prediction Yu Zhao Sebastian Gerard Y. Ban AI4TS 65 2 0 16 Dec 2024
MulModSeg: Enhancing Unpaired Multi-Modal Medical Image Segmentation with Modality-Conditioned Text Embedding and Alternating Training Chengyin Li Hui Zhu Rafi Ibn Sultan H. Bagher-Ebadian Prashant Khanduri Chetty Indrin Kundan Thind Dongxiao Zhu MedIm 80 1 0 23 Nov 2024
LDM-Morph: Latent diffusion model guided deformable image registration Jiong Wu Kuang Gong MedIm 66 4 0 23 Nov 2024
Med-2E3: A 2D-Enhanced 3D Medical Multimodal Large Language Model Yiming Shi Xun Zhu Ying Hu Chenyi Guo Miao Li Ji Wu 71 1 0 19 Nov 2024
Personalize to generalize: Towards a universal medical multi-modality generalization through personalization Zhaorui Tan Xi Yang Tan Pan Tianyi Liu Chen Jiang ... Qiufeng Wang Anh Nguyen Yuan Qi K. Huang Yuan-Chia Cheng AI4CE LM&MA 39 0 0 09 Nov 2024
MLLA-UNet: Mamba-like Linear Attention in an Efficient U-Shape Model for Medical Image Segmentation Yufeng Jiang Zongxi Li Xiangyan Chen Haoran Xie Jing Cai Mamba 39 1 0 31 Oct 2024
Revisiting MAE pre-training for 3D medical image segmentation Tassilo Wald Constantin Ulrich Stanislav Lukyanenko Andrei Goncharov Alberto Paderno Leander Maerkisch Paul F. Jäger Paul F. Jäger Klaus Maier-Hein 42 2 0 30 Oct 2024
MAPUNetR: A Hybrid Vision Transformer and U-Net Architecture for Efficient and Interpretable Medical Image Segmentation Ovais Iqbal Shah Danish Raza Rizvi Aqib Nazir Mir ViT MedIm 28 1 0 29 Oct 2024
KA $^2$ ER: Knowledge Adaptive Amalgamation of ExpeRts for Medical Images Segmentation Shangde Gao Yichao Fu Ke Liu Hongxia Xu Jian Wu MedIm 33 1 0 28 Oct 2024
Unleashing the Potential of Vision-Language Pre-Training for 3D Zero-Shot Lesion Segmentation via Mask-Attribute Alignment Yankai Jiang Wenhui Lei Xiaofan Zhang S. Zhang MedIm 32 2 0 21 Oct 2024
On-device Federated Learning in Smartphones for Detecting Depression from Reddit Posts Mustofa Ahmed Abdul Muntakim Nawrin Tabassum Mohammad Asifur Rahim Faisal Muhammad Shah FedML 26 0 0 17 Oct 2024
Multi-modal Vision Pre-training for Medical Image Analysis Shaohao Rui Lingzhi Chen Zhenyu Tang Lilong Wang M. Liu S. Zhang Xiaosong Wang 32 0 0 14 Oct 2024
Large-Scale 3D Medical Image Pre-training with Geometric Context Priors Linshan Wu Jiaxin Zhuang Hao Chen 39 5 0 13 Oct 2024
3-D Magnetotelluric Deep Learning Inversion Guided by Pseudo-Physical Information Peifan Jiang X. Wang Shuang Wang Fei Deng Kunpeng Wang Bin Wang Yuhan Yang AI4CE 109 0 0 12 Oct 2024
MedUniSeg: 2D and 3D Medical Image Segmentation via a Prompt-driven Universal Model Yiwen Ye Ziyang Chen Jianpeng Zhang Yutong Xie Yong Xia MedIm 39 3 0 08 Oct 2024
Low-Rank Continual Pyramid Vision Transformer: Incrementally Segment Whole-Body Organs in CT with Light-Weighted Adaptation Vince Zhu Zhanghexuan Ji Dazhou Guo Puyang Wang Yingda Xia Le Lu Xianghua Ye Wei-wei Zhu Dakai Jin ViT MedIm CLL 33 0 0 07 Oct 2024
Towards a vision foundation model for comprehensive assessment of Cardiac MRI Athira J. Jacob Indraneel Borgohain T. Chitiboi Puneet Sharma D. Comaniciu Daniel Rueckert MedIm 34 4 0 02 Oct 2024
Y-CA-Net: A Convolutional Attention Based Network for Volumetric Medical Image Segmentation Muhammad Hamza Sharif Muzammal Naseer Mohammad Yaqub Min Xu Mohsen Guizani OOD MedIm ViT 28 0 0 01 Oct 2024
Domain Aware Multi-Task Pretraining of 3D Swin Transformer for T1-weighted Brain MRI Jonghun Kim Mansu Kim Hyunjin Park MedIm ViT 18 0 0 01 Oct 2024
Medical Image Segmentation with SAM-generated Annotations Iira Häkkinen Iaroslav Melekhov Erik Englesson Hossein Azizpour Juho Kannala VLM 28 0 0 30 Sep 2024
LoRKD: Low-Rank Knowledge Decomposition for Medical Foundation Models Haolin Li Yuhang Zhou Ziheng Zhao Siyuan Du Jiangchao Yao Weidi Xie Ya Zhang Yanfeng Wang 31 1 0 29 Sep 2024
MorphoSeg: An Uncertainty-Aware Deep Learning Method for Biomedical Segmentation of Complex Cellular Morphologies Tianhao Zhang Heather J. McCourty Berardo M. Sanchez-Tafolla Anton Nikolaev Lyudmila Mihaylova 21 0 0 25 Sep 2024
Model Ensemble for Brain Tumor Segmentation in Magnetic Resonance Imaging Daniel Capellán-Martín Zhifan Jiang Abhijeet Parida Xinyang Liu Van Lam ... Austin Tapp Sarah Elsharkawi María J. Ledesma-Carbayo Syed Muhammad Anwar M. Linguraru 31 3 0 12 Sep 2024
Lagrange Duality and Compound Multi-Attention Transformer for Semi-Supervised Medical Image Segmentation Fuchen Zheng Quanjun Li Weixuan Li Xuhang Chen Yihang Dong Guoheng Huang Chi-Man Pun Shoujun Zhou MedIm 31 0 0 12 Sep 2024
ASSNet: Adaptive Semantic Segmentation Network for Microtumors and Multi-Organ Segmentation Fuchen Zheng Xinyi Chen Xuhang Chen Haolun Li Xiaojiao Guo Guoheng Huang Chi-Man Pun Shoujun Zhou ViT MedIm 27 0 0 12 Sep 2024
A Novel Hybrid Parameter-Efficient Fine-Tuning Approach for Hippocampus Segmentation and Alzheimer's Disease Diagnosis Wangang Cheng Guanghua He Keli Hu Mingyu Fang Liang Dong Zhong Li Hancan Zhu 36 0 0 02 Sep 2024