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Data Efficient and Weakly Supervised Computational Pathology on Whole
  Slide Images

Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Images

20 April 2020
Ming Y. Lu
Drew F. K. Williamson
Tiffany Y. Chen
Richard J. Chen
Matteo Barbieri
Faisal Mahmood
ArXivPDFHTML

Papers citing "Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Images"

50 / 168 papers shown
Title
Any-to-Any Learning in Computational Pathology via Triplet Multimodal Pretraining
Any-to-Any Learning in Computational Pathology via Triplet Multimodal Pretraining
Qichen Sun
Zhengrui Guo
Rui Peng
Hao Chen
Jinzhuo Wang
MedIm
18
0
0
19 May 2025
Denoising Mutual Knowledge Distillation in Bi-Directional Multiple Instance Learning
Denoising Mutual Knowledge Distillation in Bi-Directional Multiple Instance Learning
Chen Shu
Boyu Fu
Yiman Li
Ting Yin
Wenchuan Zhang
Jie Chen
Yuhao Yi
Hong Bu
14
0
0
17 May 2025
Multimodal Cancer Survival Analysis via Hypergraph Learning with Cross-Modality Rebalance
Multimodal Cancer Survival Analysis via Hypergraph Learning with Cross-Modality Rebalance
Mingcheng Qu
Guang Yang
Donglin Di
Tonghua Su
Yue Gao
Yang Song
Lei Fan
17
0
0
17 May 2025
Advancing Multiple Instance Learning with Continual Learning for Whole Slide Imaging
Advancing Multiple Instance Learning with Continual Learning for Whole Slide Imaging
Xianrui Li
Yufei Cui
Jun Li
Antoni B. Chan
CLL
VLM
33
0
0
15 May 2025
Attention-based Generative Latent Replay: A Continual Learning Approach for WSI Analysis
Attention-based Generative Latent Replay: A Continual Learning Approach for WSI Analysis
Pratibha Kumari
Daniel Reisenbuchler
Afshin Bozorgpour
N. Schaadt
Friedrich Feuerhake
Dorit Merhof
CLL
MedIm
41
0
0
13 May 2025
GNCAF: A GNN-based Neighboring Context Aggregation Framework for Tertiary Lymphoid Structures Semantic Segmentation in WSI
GNCAF: A GNN-based Neighboring Context Aggregation Framework for Tertiary Lymphoid Structures Semantic Segmentation in WSI
Lei Su
36
0
0
13 May 2025
SimMIL: A Universal Weakly Supervised Pre-Training Framework for Multi-Instance Learning in Whole Slide Pathology Images
SimMIL: A Universal Weakly Supervised Pre-Training Framework for Multi-Instance Learning in Whole Slide Pathology Images
Yicheng Song
Tiancheng Lin
Die Peng
Su Yang
Yi Xu
MedIm
36
0
0
10 May 2025
Histo-Miner: Deep Learning based Tissue Features Extraction Pipeline from H&E Whole Slide Images of Cutaneous Squamous Cell Carcinoma
Histo-Miner: Deep Learning based Tissue Features Extraction Pipeline from H&E Whole Slide Images of Cutaneous Squamous Cell Carcinoma
Lucas Sancéré
Carina Lorenz
Doris Helbig
Oana-Diana Persa
Sonja Dengler
...
Martim Laimer
Anne Fröhlich
Jennifer Landsberg
Johannes Brägelmann
Katarzyna Bozek
54
0
0
07 May 2025
Lifelong Whole Slide Image Analysis: Online Vision-Language Adaptation and Past-to-Present Gradient Distillation
Lifelong Whole Slide Image Analysis: Online Vision-Language Adaptation and Past-to-Present Gradient Distillation
Doanh C. Bui
H. Pham
Vu Trung Duong Le
T. Vu
Van Duy Tran
Khang Phuoc-Quy Nguyen
Y. Nakashima
CLL
MedIm
29
0
0
04 May 2025
Self-Supervision Enhances Instance-based Multiple Instance Learning Methods in Digital Pathology: A Benchmark Study
Self-Supervision Enhances Instance-based Multiple Instance Learning Methods in Digital Pathology: A Benchmark Study
Ali Mammadov
Loic Le Folgoc
Julien Adam
Anne Buronfosse
Gilles Hayem
Guillaume Hocquet
Pietro Gori
SSL
45
0
0
02 May 2025
Weakly Semi-supervised Whole Slide Image Classification by Two-level Cross Consistency Supervision
Weakly Semi-supervised Whole Slide Image Classification by Two-level Cross Consistency Supervision
Linhao Qu
Shiman Li
Xiaoyuan Luo
Shaolei Liu
Qinhao Guo
Manning Wang
Zhijian Song
48
0
0
16 Apr 2025
BioX-CPath: Biologically-driven Explainable Diagnostics for Multistain IHC Computational Pathology
BioX-CPath: Biologically-driven Explainable Diagnostics for Multistain IHC Computational Pathology
Amaya Gallagher-Syed
Henry Senior
Omnia Alwazzan
Elena Pontarini
Michele Bombardieri
C. Pitzalis
M. Lewis
Michael Barnes
Luca Rossi
Gregory G. Slabaugh
48
0
0
26 Mar 2025
VGAT: A Cancer Survival Analysis Framework Transitioning from Generative Visual Question Answering to Genomic Reconstruction
VGAT: A Cancer Survival Analysis Framework Transitioning from Generative Visual Question Answering to Genomic Reconstruction
Zizhi Chen
Minghao Han
Xukun Zhang
Shuwei Ma
Tao Liu
Xing Wei
Li Zhang
54
0
0
25 Mar 2025
From Pixels to Histopathology: A Graph-Based Framework for Interpretable Whole Slide Image Analysis
From Pixels to Histopathology: A Graph-Based Framework for Interpretable Whole Slide Image Analysis
Alexander Weers
Alexander H. Berger
Laurin Lux
Peter Schüffler
Daniel Rueckert
Johannes C. Paetzold
49
0
0
14 Mar 2025
Robust Multimodal Survival Prediction with the Latent Differentiation Conditional Variational AutoEncoder
Robust Multimodal Survival Prediction with the Latent Differentiation Conditional Variational AutoEncoder
Junjie Zhou
Jiao Tang
Yingli Zuo
Peng Wan
Daoqiang Zhang
Wei Shao
62
1
0
12 Mar 2025
Pathological Prior-Guided Multiple Instance Learning For Mitigating Catastrophic Forgetting in Breast Cancer Whole Slide Image Classification
Pathological Prior-Guided Multiple Instance Learning For Mitigating Catastrophic Forgetting in Breast Cancer Whole Slide Image Classification
Weixi Zheng
Aoling Huang. Jingping Yuan
Jingping Yuan
Haoyu Zhao
Zhou Zhao
Yongchao Xu
Thierry Géraud
CLL
60
0
0
08 Mar 2025
Fast and Accurate Gigapixel Pathological Image Classification with Hierarchical Distillation Multi-Instance Learning
Fast and Accurate Gigapixel Pathological Image Classification with Hierarchical Distillation Multi-Instance Learning
Jiuyang Dong
Junjun Jiang
Kui Jiang
Jiahan Li
Yongbing Zhang
50
0
0
28 Feb 2025
"No negatives needed": weakly-supervised regression for interpretable tumor detection in whole-slide histopathology images
"No negatives needed": weakly-supervised regression for interpretable tumor detection in whole-slide histopathology images
Marina DÁmato
J. A. van der Laak
F. Ciompi
48
0
0
28 Feb 2025
SEW: Self-calibration Enhanced Whole Slide Pathology Image Analysis
SEW: Self-calibration Enhanced Whole Slide Pathology Image Analysis
Haoming Luo
Xiaotian Yu
Shengxuming Zhang
Jiabin Xia
Yang Jian
...
Liang Xue
Xiuming Zhang
Jing Zhang
Jing Zhang
Zunlei Feng
79
0
0
17 Feb 2025
ViLa-MIL: Dual-scale Vision-Language Multiple Instance Learning for Whole Slide Image Classification
ViLa-MIL: Dual-scale Vision-Language Multiple Instance Learning for Whole Slide Image Classification
Jiangbo Shi
Chen Li
Tieliang Gong
Yefeng Zheng
Huazhu Fu
VLM
67
7
0
12 Feb 2025
Efficient Self-Supervised Grading of Prostate Cancer Pathology
Riddhasree Bhattacharyya
S. Das
S. Mitra
39
0
0
28 Jan 2025
Implementing Trust in Non-Small Cell Lung Cancer Diagnosis with a Conformalized Uncertainty-Aware AI Framework in Whole-Slide Images
Xiaoge Zhang
Tao Wang
Chao Yan
Fedaa Najdawi
Kai Zhou
Yuan Ma
Yiu-ming Cheung
Bradley Malin
MedIm
45
0
0
03 Jan 2025
Unlocking adaptive digital pathology through dynamic feature learning
Unlocking adaptive digital pathology through dynamic feature learning
Jiawen Li
Tian Guan
Qingxin Xia
Yunhong Wang
Xitong Ling
...
Xiu-Wu Bian
Ziyi Wang
Lingchuan Guo
Chao He
Yonghong He
AI4CE
39
0
0
31 Dec 2024
FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classification
FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classification
Zhengrui Guo
Conghao Xiong
Jiabo Ma
Qichen Sun
Lishuang Feng
Jinzhuo Wang
Hao Chen
277
0
0
22 Nov 2024
RankByGene: Gene-Guided Histopathology Representation Learning Through Cross-Modal Ranking Consistency
RankByGene: Gene-Guided Histopathology Representation Learning Through Cross-Modal Ranking Consistency
Wentao Huang
Meilong Xu
Xiaoling Hu
Shahira Abousamra
Aniruddha Ganguly
...
Prateek Prasanna
Tahsin M. Kurc
Joel H. Saltz
Michael L. Miller
Chong Chen
86
0
0
22 Nov 2024
Unsupervised Foundation Model-Agnostic Slide-Level Representation Learning
Unsupervised Foundation Model-Agnostic Slide-Level Representation Learning
Tim Lenz
Peter Neidlinger
M. Ligero
Georg Wolflein
M. Treeck
Jakob Nikolas Kather
75
2
0
20 Nov 2024
HMIL: Hierarchical Multi-Instance Learning for Fine-Grained Whole Slide Image Classification
HMIL: Hierarchical Multi-Instance Learning for Fine-Grained Whole Slide Image Classification
Cheng Jin
Luyang Luo
Huangjing Lin
Jun Hou
Hao Chen
57
4
0
12 Nov 2024
PathoGen-X: A Cross-Modal Genomic Feature Trans-Align Network for
  Enhanced Survival Prediction from Histopathology Images
PathoGen-X: A Cross-Modal Genomic Feature Trans-Align Network for Enhanced Survival Prediction from Histopathology Images
Akhila Krishna
Nikhil Cherian Kurian
Abhijeet Patil
Amruta Parulekar
Amit Sethi
MedIm
LM&MA
43
0
0
01 Nov 2024
MI-VisionShot: Few-shot adaptation of vision-language models for
  slide-level classification of histopathological images
MI-VisionShot: Few-shot adaptation of vision-language models for slide-level classification of histopathological images
Pablo Meseguer
Rocío del Amor
Valery Naranjo
VLM
39
0
0
21 Oct 2024
Rethinking Transformer for Long Contextual Histopathology Whole Slide
  Image Analysis
Rethinking Transformer for Long Contextual Histopathology Whole Slide Image Analysis
Honglin Li
Yunlong Zhang
Pingyi Chen
Zhongyi Shui
Chenglu Zhu
Lin Yang
MedIm
62
4
0
18 Oct 2024
Improving Colorectal Cancer Screening and Risk Assessment through Predictive Modeling on Medical Images and Records
Improving Colorectal Cancer Screening and Risk Assessment through Predictive Modeling on Medical Images and Records
Shuai Jiang
Christina Robinson
Joseph Anderson
William Hisey
Lynn Butterly
A. Suriawinata
Saeed Hassanpour
24
0
0
13 Oct 2024
Semantic Segmentation Based Quality Control of Histopathology Whole
  Slide Images
Semantic Segmentation Based Quality Control of Histopathology Whole Slide Images
Abhijeet Patil
Garima Jain
Harsh Diwakar
Jay Sawant
Tripti Bameta
Swapnil Rane
Amit Sethi
43
1
0
04 Oct 2024
Efficient Quality Control of Whole Slide Pathology Images with
  Human-in-the-loop Training
Efficient Quality Control of Whole Slide Pathology Images with Human-in-the-loop Training
Abhijeet Patil
Harsh Diwakar
Jay Sawant
Nikhil Cherian Kurian
Subhash Yadav
Swapnil Rane
Tripti Bameta
Amit Sethi
OOD
29
15
0
29 Sep 2024
Interpretable Vision-Language Survival Analysis with Ordinal Inductive Bias for Computational Pathology
Interpretable Vision-Language Survival Analysis with Ordinal Inductive Bias for Computational Pathology
Pei Liu
Luping Ji
Jiaxiang Gou
Bo Fu
Mao Ye
41
2
0
14 Sep 2024
Tissue Concepts: supervised foundation models in computational pathology
Tissue Concepts: supervised foundation models in computational pathology
Till Nicke
Jan Raphael Schaefer
Henning Hoefener
Friedrich Feuerhake
Dorit Merhof
Fabian Kiessling
Johannes Lotz
MedIm
52
0
0
05 Sep 2024
Snuffy: Efficient Whole Slide Image Classifier
Snuffy: Efficient Whole Slide Image Classifier
Hossein Jafarinia
Alireza Alipanah
Danial Hamdi
Saeed Razavi
Nahal Mirzaie
M. Rohban
3DH
55
1
0
15 Aug 2024
Rethinking Pre-Trained Feature Extractor Selection in Multiple Instance Learning for Whole Slide Image Classification
Rethinking Pre-Trained Feature Extractor Selection in Multiple Instance Learning for Whole Slide Image Classification
Bryan Wong
MunYong Yi
Mun Yong Yi
VLM
66
0
0
02 Aug 2024
A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model
A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model
Yingxue Xu
Yihui Wang
Fengtao Zhou
Jiabo Ma
Shu Yang
...
Anjia Han
Ronald Cheong Kin Chan
Li Liang
Xiuming Zhang
Hao Chen
37
16
0
22 Jul 2024
WSI-VQA: Interpreting Whole Slide Images by Generative Visual Question
  Answering
WSI-VQA: Interpreting Whole Slide Images by Generative Visual Question Answering
Pingyi Chen
Chenglu Zhu
Sunyi Zheng
Honglin Li
Lin Yang
60
7
0
08 Jul 2024
SCMIL: Sparse Context-aware Multiple Instance Learning for Predicting
  Cancer Survival Probability Distribution in Whole Slide Images
SCMIL: Sparse Context-aware Multiple Instance Learning for Predicting Cancer Survival Probability Distribution in Whole Slide Images
Zekang Yang
Hong Liu
Xiangdong Wang
29
1
0
30 Jun 2024
Triage of 3D pathology data via 2.5D multiple-instance learning to guide
  pathologist assessments
Triage of 3D pathology data via 2.5D multiple-instance learning to guide pathologist assessments
Gan Gao
Andrew H. Song
Fiona Wang
David Brenes
Rui Wang
Sarah S. L. Chow
K. Bishop
Lawrence D. True
Faisal Mahmood
Jonathan T. C. Liu
34
0
0
11 Jun 2024
Genomics-guided Representation Learning for Pathologic Pan-cancer Tumor
  Microenvironment Subtype Prediction
Genomics-guided Representation Learning for Pathologic Pan-cancer Tumor Microenvironment Subtype Prediction
Fangliangzi Meng
Hongrun Zhang
Ruodan Yan
Guohui Chuai
Chao Li
Qi Liu
MedIm
45
2
0
10 Jun 2024
Predicting Genetic Mutation from Whole Slide Images via
  Biomedical-Linguistic Knowledge Enhanced Multi-label Classification
Predicting Genetic Mutation from Whole Slide Images via Biomedical-Linguistic Knowledge Enhanced Multi-label Classification
Gexin Huang
Chenfei Wu
Mingjie Li
Xiaojun Chang
Ling-Hao Chen
Ying Sun
Shen Zhao
Xiaodan Liang
Liang Lin
MedIm
37
0
0
05 Jun 2024
IHC Matters: Incorporating IHC analysis to H&E Whole Slide Image
  Analysis for Improved Cancer Grading via Two-stage Multimodal Bilinear
  Pooling Fusion
IHC Matters: Incorporating IHC analysis to H&E Whole Slide Image Analysis for Improved Cancer Grading via Two-stage Multimodal Bilinear Pooling Fusion
Jun Wang
Yu Mao
Yufei Cui
Nan Guan
Chun Jason Xue
24
1
0
13 May 2024
FORESEE: Multimodal and Multi-view Representation Learning for Robust
  Prediction of Cancer Survival
FORESEE: Multimodal and Multi-view Representation Learning for Robust Prediction of Cancer Survival
Liangrui Pan
Yijun Peng
Yan Li
Yiyi Liang
Liwen Xu
Qingchun Liang
Shaoliang Peng
41
0
0
13 May 2024
Weakly-Supervised Residual Evidential Learning for Multi-Instance
  Uncertainty Estimation
Weakly-Supervised Residual Evidential Learning for Multi-Instance Uncertainty Estimation
Pei Liu
Luping Ji
EDL
36
4
0
07 May 2024
Multi-Scale Heterogeneity-Aware Hypergraph Representation for
  Histopathology Whole Slide Images
Multi-Scale Heterogeneity-Aware Hypergraph Representation for Histopathology Whole Slide Images
Minghao Han
Xukun Zhang
Dingkang Yang
Tao Liu
Haopeng Kuang
Jinghui Feng
Lihua Zhang
37
1
0
30 Apr 2024
F2FLDM: Latent Diffusion Models with Histopathology Pre-Trained
  Embeddings for Unpaired Frozen Section to FFPE Translation
F2FLDM: Latent Diffusion Models with Histopathology Pre-Trained Embeddings for Unpaired Frozen Section to FFPE Translation
M. M. Ho
Shikha Dubey
Yosep Chong
Beatrice Knudsen
Tolga Tasdizen
MedIm
AI4CE
45
4
0
19 Apr 2024
Finding Regions of Interest in Whole Slide Images Using Multiple
  Instance Learning
Finding Regions of Interest in Whole Slide Images Using Multiple Instance Learning
Martim Afonso
Praphulla M. S. Bhawsar
Monjoy Saha
Jonas S. Almeida
Arlindo L. Oliveira
26
0
0
01 Apr 2024
Integrative Graph-Transformer Framework for Histopathology Whole Slide
  Image Representation and Classification
Integrative Graph-Transformer Framework for Histopathology Whole Slide Image Representation and Classification
Zhan Shi
Jingwei Zhang
Jun Kong
Fusheng Wang
MedIm
42
3
0
26 Mar 2024
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