Endowing Protein Language Models with Structural Knowledge

26 January 2024

Papers citing "Endowing Protein Language Models with Structural Knowledge"

7 / 7 papers shown

Title
Structure-informed Language Models Are Protein Designers Zaixiang Zheng Yifan Deng Dongyu Xue Yi Zhou YE Fei Quanquan Gu 66 90 0 03 Feb 2023
ATOM3D: Tasks On Molecules in Three Dimensions Raphael J. L. Townshend M. Vögele Patricia Suriana Alexander Derry Alexander Powers ... Brandon M. Anderson Stephan Eismann Risi Kondor Russ Altman R. Dror AI4CE 47 121 0 07 Dec 2020
Is Transfer Learning Necessary for Protein Landscape Prediction? Amir Shanehsazzadeh David Belanger David Dohan SSL 82 61 0 31 Oct 2020
ProtTrans: Towards Cracking the Language of Life's Code Through Self-Supervised Deep Learning and High Performance Computing Ahmed Elnaggar M. Heinzinger Christian Dallago Ghalia Rehawi Yu Wang ... Tamas B. Fehér Christoph Angerer Martin Steinegger D. Bhowmik B. Rost DRL 41 932 0 13 Jul 2020
Axial Attention in Multidimensional Transformers Jonathan Ho Nal Kalchbrenner Dirk Weissenborn Tim Salimans 81 525 0 20 Dec 2019
Evaluating Protein Transfer Learning with TAPE Roshan Rao Nicholas Bhattacharya Neil Thomas Yan Duan Xi Chen John F. Canny Pieter Abbeel Yun S. Song SSL 79 786 0 19 Jun 2019
How Powerful are Graph Neural Networks? Keyulu Xu Weihua Hu J. Leskovec Stefanie Jegelka GNN 173 7,554 0 01 Oct 2018