Amortized Inference for Heterogeneous Reconstruction in Cryo-EM

Amortized Inference for Heterogeneous Reconstruction in Cryo-EM

13 October 2022

Gordon Wetzstein

Julien N. P. Martel

Frédéric Poitevin

Papers citing "Amortized Inference for Heterogeneous Reconstruction in Cryo-EM"

14 / 14 papers shown

Title
CryoBench: Diverse and challenging datasets for the heterogeneity problem in cryo-EM Minkyu Jeon Rishwanth Raghu Miro A. Astore Geoffrey Woollard Ryan Feathers Alkin Kaz Sonya M. Hanson Pilar Cossio Ellen D. Zhong 68 8 0 17 Jan 2025
DualContrast: Unsupervised Disentangling of Content and Transformations with Implicit Parameterization M. R. Uddin Min Xu 96 0 0 27 May 2024
CryoAI: Amortized Inference of Poses for Ab Initio Reconstruction of 3D Molecular Volumes from Real Cryo-EM Images Axel Levy Frédéric Poitevin Julien N. P. Martel Y. Nashed A. Peck Nina Miolane Daniel Ratner Mike Dunne Gordon Wetzstein 37 43 0 15 Mar 2022
Deep Generative Modeling for Volume Reconstruction in Cryo-Electron Microscopy Claire Donnat Axel Levy Frédéric Poitevin Ellen D. Zhong Nina Miolane 42 37 0 08 Jan 2022
Fourier Features Let Networks Learn High Frequency Functions in Low Dimensional Domains Matthew Tancik Pratul P. Srinivasan B. Mildenhall Sara Fridovich-Keil N. Raghavan Utkarsh Singhal R. Ramamoorthi Jonathan T. Barron Ren Ng 124 2,418 0 18 Jun 2020
Decision-Making with Auto-Encoding Variational Bayes Romain Lopez Pierre Boyeau Nir Yosef Michael I. Jordan Jeffrey Regier BDL 393 10,591 0 17 Feb 2020
Estimation of Orientation and Camera Parameters from Cryo-Electron Microscopy Images with Variational Autoencoders and Generative Adversarial Networks Nina Miolane Frédéric Poitevin Yee-Ting Li S. Holmes 3DV 75 24 0 19 Nov 2019
Explicitly disentangling image content from translation and rotation with spatial-VAE Tristan Bepler Ellen D. Zhong Kotaro Kelley E. Brignole Bonnie Berger CoGe DRL 46 74 0 25 Sep 2019
Reconstructing continuous distributions of 3D protein structure from cryo-EM images Ellen D. Zhong Tristan Bepler Joseph H. Davis Bonnie Berger 3DV 54 110 0 11 Sep 2019
Hyper-Molecules: on the Representation and Recovery of Dynamical Structures, with Application to Flexible Macro-Molecular Structures in Cryo-EM Roy R. Lederman Joakim Andén A. Singer 56 31 0 02 Jul 2019
An Introduction to Variational Autoencoders Diederik P. Kingma Max Welling BDL SSL DRL 80 2,354 0 06 Jun 2019
On the Continuity of Rotation Representations in Neural Networks Yi Zhou Connelly Barnes Jingwan Lu Jimei Yang Hao Li 3DH 70 1,289 0 17 Dec 2018
Adam: A Method for Stochastic Optimization Diederik P. Kingma Jimmy Ba ODL 1.8K 150,115 0 22 Dec 2014
Very Deep Convolutional Networks for Large-Scale Image Recognition Karen Simonyan Andrew Zisserman FAtt MDE 1.6K 100,386 0 04 Sep 2014

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