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Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives

2 June 2022

Bennett A. Landman

Papers citing "Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives"

50 / 161 papers shown

Title
Instance-based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image Zeyu Gao Bangyang Hong Xianli Zhang Yang Li Chang Jia Jialun Wu Chunbao Wang Deyu Meng Chen Li MedIm 68 58 0 23 Jun 2021
More than Encoder: Introducing Transformer Decoder to Upsample Yijiang Li Wentian Cai Ying Gao Chengming Li Xiping Hu ViT MedIm 55 55 0 20 Jun 2021
BEiT: BERT Pre-Training of Image Transformers Hangbo Bao Li Dong Songhao Piao Furu Wei ViT 292 2,845 0 15 Jun 2021
S $^2$ -MLP: Spatial-Shift MLP Architecture for Vision Tan Yu Xu Li Yunfeng Cai Mingming Sun Ping Li 85 188 0 14 Jun 2021
DS-TransUNet:Dual Swin Transformer U-Net for Medical Image Segmentation Ai-Jun Lin Bingzhi Chen Jiayu Xu Zheng Zhang Guangming Lu ViT MedIm 74 634 0 12 Jun 2021
The Medical Segmentation Decathlon Michela Antonelli Annika Reinke Spyridon Bakas Keyvan Farahani AnnetteKopp-Schneider ... Zhanwei Xu Yefeng Zheng Amber L. Simpson Lena Maier-Hein M. Jorge Cardoso OOD 114 990 0 10 Jun 2021
CoAtNet: Marrying Convolution and Attention for All Data Sizes Zihang Dai Hanxiao Liu Quoc V. Le Mingxing Tan ViT 141 1,212 0 09 Jun 2021
On the Connection between Local Attention and Dynamic Depth-wise Convolution Qi Han Zejia Fan Qi Dai Lei-huan Sun Ming-Ming Cheng Jiaying Liu Jingdong Wang ViT 83 109 0 08 Jun 2021
Efficient Training of Visual Transformers with Small Datasets Yahui Liu E. Sangineto Wei Bi N. Sebe Bruno Lepri Marco De Nadai ViT 68 173 0 07 Jun 2021
ViTAE: Vision Transformer Advanced by Exploring Intrinsic Inductive Bias Yufei Xu Qiming Zhang Jing Zhang Dacheng Tao ViT 162 338 0 07 Jun 2021
You Only Look at One Sequence: Rethinking Transformer in Vision through Object Detection Yuxin Fang Bencheng Liao Xinggang Wang Jiemin Fang Jiyang Qi Rui Wu Jianwei Niu Wenyu Liu ViT 66 324 0 01 Jun 2021
SegFormer: Simple and Efficient Design for Semantic Segmentation with Transformers Enze Xie Wenhai Wang Zhiding Yu Anima Anandkumar J. Álvarez Ping Luo ViT 319 5,072 0 31 May 2021
Medical Image Segmentation Using Squeeze-and-Expansion Transformers Shaohua Li Xiuchao Sui Xiangde Luo Xinxing Xu Yong Liu Rick Siow Mong Goh ViT MedIm 64 168 0 20 May 2021
COVID-Net CXR-2: An Enhanced Deep Convolutional Neural Network Design for Detection of COVID-19 Cases from Chest X-ray Images Maya Pavlova Naomi Terhljan A. Chung Andy Zhao Siddharth Surana Hossein Aboutalebi Hayden Gunraj A. Sabri Amer Alaref Alexander Wong 46 47 0 14 May 2021
Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation Hu Cao Yueyue Wang Jieneng Chen Dongsheng Jiang Xiaopeng Zhang Qi Tian Manning Wang ViT MedIm 141 2,922 0 12 May 2021
Conformer: Local Features Coupling Global Representations for Visual Recognition Zhiliang Peng Wei Huang Shanzhi Gu Lingxi Xie Yaowei Wang Jianbin Jiao QiXiang Ye ViT 63 544 0 09 May 2021
ResMLP: Feedforward networks for image classification with data-efficient training Hugo Touvron Piotr Bojanowski Mathilde Caron Matthieu Cord Alaaeldin El-Nouby ... Gautier Izacard Armand Joulin Gabriel Synnaeve Jakob Verbeek Hervé Jégou VLM 77 667 0 07 May 2021
MLP-Mixer: An all-MLP Architecture for Vision Ilya O. Tolstikhin N. Houlsby Alexander Kolesnikov Lucas Beyer Xiaohua Zhai ... Andreas Steiner Daniel Keysers Jakob Uszkoreit Mario Lucic Alexey Dosovitskiy 441 2,689 0 04 May 2021
Emerging Properties in Self-Supervised Vision Transformers Mathilde Caron Hugo Touvron Ishan Misra Hervé Jégou Julien Mairal Piotr Bojanowski Armand Joulin 724 6,135 0 29 Apr 2021
Twins: Revisiting the Design of Spatial Attention in Vision Transformers Xiangxiang Chu Zhi Tian Yuqing Wang Bo Zhang Haibing Ren Xiaolin K. Wei Huaxia Xia Chunhua Shen ViT 84 1,027 0 28 Apr 2021
Multiscale Vision Transformers Haoqi Fan Bo Xiong K. Mangalam Yanghao Li Zhicheng Yan Jitendra Malik Christoph Feichtenhofer ViT 135 1,265 0 22 Apr 2021
ViT-V-Net: Vision Transformer for Unsupervised Volumetric Medical Image Registration Junyu Chen Yufan He Eric C. Frey Ye Li Yong Du ViT MedIm 74 186 0 13 Apr 2021
An Empirical Study of Training Self-Supervised Vision Transformers Xinlei Chen Saining Xie Kaiming He ViT 159 1,871 0 05 Apr 2021
DiNTS: Differentiable Neural Network Topology Search for 3D Medical Image Segmentation Yufan He Dong Yang H. Roth Can Zhao Daguang Xu MedIm 66 64 0 29 Mar 2021
CvT: Introducing Convolutions to Vision Transformers Haiping Wu Bin Xiao Noel Codella Mengchen Liu Xiyang Dai Lu Yuan Lei Zhang ViT 154 1,917 0 29 Mar 2021
Understanding Robustness of Transformers for Image Classification Srinadh Bhojanapalli Ayan Chakrabarti Daniel Glasner Daliang Li Thomas Unterthiner Andreas Veit ViT 93 386 0 26 Mar 2021
Scaling Local Self-Attention for Parameter Efficient Visual Backbones Ashish Vaswani Prajit Ramachandran A. Srinivas Niki Parmar Blake A. Hechtman Jonathon Shlens 94 403 0 23 Mar 2021
Incorporating Convolution Designs into Visual Transformers Kun Yuan Shaopeng Guo Ziwei Liu Aojun Zhou F. Yu Wei Wu ViT 113 480 0 22 Mar 2021
ConViT: Improving Vision Transformers with Soft Convolutional Inductive Biases Stéphane dÁscoli Hugo Touvron Matthew L. Leavitt Ari S. Morcos Giulio Biroli Levent Sagun ViT 136 834 0 19 Mar 2021
UNETR: Transformers for 3D Medical Image Segmentation Ali Hatamizadeh Yucheng Tang Vishwesh Nath Dong Yang Andriy Myronenko Bennett Landman H. Roth Daguang Xu ViT MedIm 184 1,614 0 18 Mar 2021
Vision Transformer for COVID-19 CXR Diagnosis using Chest X-ray Feature Corpus Sangjoon Park Gwanghyun Kim Y. Oh J. Seo Sang Min Lee Jin Hwan Kim Sungjun Moon Jae-Kwang Lim J. C. Ye ViT MedIm 71 33 0 12 Mar 2021
U-Net Transformer: Self and Cross Attention for Medical Image Segmentation Olivier Petit Nicolas Thome Clément Rambour L. Soler ViT MedIm 83 248 0 10 Mar 2021
TransBTS: Multimodal Brain Tumor Segmentation Using Transformer Wenxuan Wang Chen Chen Meng Ding Jiangyun Li Hong Yu Sen Zha ViT MedIm 94 729 0 07 Mar 2021
Deep reinforcement learning in medical imaging: A literature review S. Kevin Zhou Hoang Ngan Le Khoa Luu Hien V Nguyen N. Ayache LM&MA OffRL MedIm 59 148 0 05 Mar 2021
SpecTr: Spectral Transformer for Hyperspectral Pathology Image Segmentation Boxiang Yun Yan Wang Jieneng Chen Huiyu Wang Wei Shen Qingli Li ViT MedIm 81 50 0 05 Mar 2021
CoTr: Efficiently Bridging CNN and Transformer for 3D Medical Image Segmentation Yutong Xie Jianpeng Zhang Chunhua Shen Yong-quan Xia ViT MedIm 86 502 0 04 Mar 2021
Pyramid Vision Transformer: A Versatile Backbone for Dense Prediction without Convolutions Wenhai Wang Enze Xie Xiang Li Deng-Ping Fan Kaitao Song Ding Liang Tong Lu Ping Luo Ling Shao ViT 535 3,740 0 24 Feb 2021
Medical Transformer: Gated Axial-Attention for Medical Image Segmentation Jeya Maria Jose Valanarasu Poojan Oza Ilker Hacihaliloglu Vishal M. Patel ViT MedIm 108 993 0 21 Feb 2021
Domain Adaptation for Medical Image Analysis: A Survey Hao Guan Mingxia Liu OOD 134 560 0 18 Feb 2021
TransFuse: Fusing Transformers and CNNs for Medical Image Segmentation Yundong Zhang Huiye Liu Qiang Hu ViT MedIm 260 926 0 16 Feb 2021
TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation Jieneng Chen Yongyi Lu Qihang Yu Xiangde Luo Ehsan Adeli Yan Wang Le Lu Alan Yuille Yuyin Zhou ViT MedIm 98 3,499 0 08 Feb 2021
A Petri Dish for Histopathology Image Analysis Jerry W. Wei A. Suriawinata Bing Ren Xiaoying Liu Mikhail Lisovsky ... Michael Baker Naofumi Tomita Lorenzo Torresani Jason W. Wei Saeed Hassanpour 108 73 0 29 Jan 2021
Bottleneck Transformers for Visual Recognition A. Srinivas Nayeon Lee Niki Parmar Jonathon Shlens Pieter Abbeel Ashish Vaswani SLR 360 994 0 27 Jan 2021
COVID-Net CT-2: Enhanced Deep Neural Networks for Detection of COVID-19 from Chest CT Images Through Bigger, More Diverse Learning Hayden Gunraj A. Sabri D. Koff A. Wong 104 98 0 19 Jan 2021
COVID-19 Prognosis via Self-Supervised Representation Learning and Multi-Image Prediction Anuroop Sriram Matthew Muckley Koustuv Sinha Farah E. Shamout Joelle Pineau Krzysztof J. Geras Lea Azour Y. Aphinyanaphongs N. Yakubova W. Moore MedIm 185 65 0 13 Jan 2021
Toward Transformer-Based Object Detection Josh Beal Eric Kim Eric Tzeng Dong Huk Park Andrew Zhai Dmitry Kislyuk ViT 91 215 0 17 Dec 2020
Transformer Interpretability Beyond Attention Visualization Hila Chefer Shir Gur Lior Wolf 137 673 0 17 Dec 2020
Positional Encoding as Spatial Inductive Bias in GANs Rui Xu Xintao Wang Kai-xiang Chen Bolei Zhou Chen Change Loy GAN 93 90 0 09 Dec 2020
Pre-Trained Image Processing Transformer Hanting Chen Yunhe Wang Tianyu Guo Chang Xu Yiping Deng Zhenhua Liu Siwei Ma Chunjing Xu Chao Xu Wen Gao VLM ViT 145 1,678 0 01 Dec 2020
End-to-End Object Detection with Adaptive Clustering Transformer Minghang Zheng Peng Gao Renrui Zhang Kunchang Li Xiaogang Wang Hongsheng Li Hao Dong ViT 158 199 0 18 Nov 2020