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BolT: Fused Window Transformers for fMRI Time Series Analysis

23 May 2022

Papers citing "BolT: Fused Window Transformers for fMRI Time Series Analysis"

38 / 38 papers shown

Title
Reconstructing physiological signals from fMRI across the adult lifespan Shiyu Wang Ziyuan Xu Laurent M. Lochard Yamin Li Jiawen Fan Jianfei Chen Yuankai Huo Mara Mather Roza G. Bayrak Catie Chang 97 0 0 26 Aug 2024
A Transformer-based Neural Language Model that Synthesizes Brain Activation Maps from Free-Form Text Queries G. Ngo Minh Le Nguyen Nancy F. Chen M. Sabuncu MedIm 42 7 0 24 Jul 2022
Unsupervised Medical Image Translation with Adversarial Diffusion Models Muzaffer Özbey Onat Dalmaz S. Dar H. Bedel cSaban Ozturk Alper Gungor Tolga cCukur DiffM MedIm 90 289 0 17 Jul 2022
One Model to Unite Them All: Personalized Federated Learning of Multi-Contrast MRI Synthesis Onat Dalmaz Muhammad Usama Mirza Gokberk Elmas Muzaffer Özbey S. Dar Emir Ceyani Salman Avestimehr Tolga cCukur MedIm 126 42 0 13 Jul 2022
Adaptive Diffusion Priors for Accelerated MRI Reconstruction Alper Gungor S. Dar cSaban Ozturk Yilmaz Korkmaz Gokberk Elmas Muzaffer Özbey Tolga cCukur DiffM MedIm 85 192 0 12 Jul 2022
Disentangling Spatial-Temporal Functional Brain Networks via Twin-Transformers Xiao-Wen Yu Lu Zhang Lin Zhao Yanjun Lyu Tianming Liu Dajiang Zhu 47 10 0 20 Apr 2022
Federated Learning of Generative Image Priors for MRI Reconstruction Gokberk Elmas S. Dar Yilmaz Korkmaz Emir Ceyani Burak Susam Muzaffer Özbey Salman Avestimehr Tolga cCukur FedML MedIm AI4CE 98 90 0 08 Feb 2022
Masked Autoencoders Are Scalable Vision Learners Kaiming He Xinlei Chen Saining Xie Yanghao Li Piotr Dollár Ross B. Girshick ViT TPM 480 7,837 0 11 Nov 2021
Focal Self-attention for Local-Global Interactions in Vision Transformers Jianwei Yang Chunyuan Li Pengchuan Zhang Xiyang Dai Bin Xiao Lu Yuan Jianfeng Gao ViT 82 436 0 01 Jul 2021
ResViT: Residual vision transformers for multi-modal medical image synthesis Onat Dalmaz Mahmut Yurt Tolga Çukur ViT MedIm 98 351 0 30 Jun 2021
Learning Dynamic Graph Representation of Brain Connectome with Spatio-Temporal Attention Byung-Hoon Kim Jong Chul Ye Jae-Jin Kim 115 131 0 27 May 2021
Unsupervised MRI Reconstruction via Zero-Shot Learned Adversarial Transformers Yilmaz Korkmaz S. Dar Mahmut Yurt Muzaffer Özbey Tolga Çukur ViT MedIm 106 193 0 15 May 2021
Generic Attention-model Explainability for Interpreting Bi-Modal and Encoder-Decoder Transformers Hila Chefer Shir Gur Lior Wolf ViT 75 325 0 29 Mar 2021
Swin Transformer: Hierarchical Vision Transformer using Shifted Windows Ze Liu Yutong Lin Yue Cao Han Hu Yixuan Wei Zheng Zhang Stephen Lin B. Guo ViT 470 21,603 0 25 Mar 2021
An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale Alexey Dosovitskiy Lucas Beyer Alexander Kolesnikov Dirk Weissenborn Xiaohua Zhai ... Matthias Minderer G. Heigold Sylvain Gelly Jakob Uszkoreit N. Houlsby ViT 684 41,563 0 22 Oct 2020
Array Programming with NumPy Charles R. Harris K. Millman S. Walt R. Gommers Pauli Virtanen ... Tyler Reddy Warren Weckesser Hameer Abbasi C. Gohlke T. Oliphant 158 15,066 0 18 Jun 2020
On the Bottleneck of Graph Neural Networks and its Practical Implications Uri Alon Eran Yahav GNN 108 695 0 09 Jun 2020
Language Models are Few-Shot Learners Tom B. Brown Benjamin Mann Nick Ryder Melanie Subbiah Jared Kaplan ... Christopher Berner Sam McCandlish Alec Radford Ilya Sutskever Dario Amodei BDL 904 42,463 0 28 May 2020
Attend and Decode: 4D fMRI Task State Decoding Using Attention Models Sam Nguyen Brenda Ng Alan Kaplan Priyadip Ray 55 25 0 10 Apr 2020
Longformer: The Long-Document Transformer Iz Beltagy Matthew E. Peters Arman Cohan RALM VLM 187 4,105 0 10 Apr 2020
Spatio-Temporal Graph Convolution for Resting-State fMRI Analysis Soham Gadgil Qingyu Zhao A. Pfefferbaum E. Sullivan Ehsan Adeli K. Pohl 153 154 0 24 Mar 2020
Understanding Graph Isomorphism Network for rs-fMRI Functional Connectivity Analysis Byung-Hoon Kim J. C. Ye AI4CE GNN 81 131 0 10 Jan 2020
Input-Cell Attention Reduces Vanishing Saliency of Recurrent Neural Networks Aya Abdelsalam Ismail Mohamed K. Gunady L. Pessoa H. C. Bravo Soheil Feizi AI4TS 91 50 0 27 Oct 2019
Measuring and Relieving the Over-smoothing Problem for Graph Neural Networks from the Topological View Deli Chen Yankai Lin Wei Li Peng Li Jie Zhou Xu Sun 94 1,113 0 07 Sep 2019
Graph Neural Network for Interpreting Task-fMRI Biomarkers Xiaoxiao Li Nicha Dvornek Yuan Zhou Juntang Zhuang P. Ventola James S. Duncan 85 104 0 02 Jul 2019
Deep Learning with Mixed Supervision for Brain Tumor Segmentation Pawel Mlynarski H. Delingette A. Criminisi N. Ayache 65 123 0 10 Dec 2018
BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding Jacob Devlin Ming-Wei Chang Kenton Lee Kristina Toutanova VLM SSL SSeg 1.8K 95,324 0 11 Oct 2018
Reconstructing Faces from fMRI Patterns using Deep Generative Neural Networks R. V. Rullen Leila Reddy CVBM 67 142 0 09 Oct 2018
Graph Saliency Maps through Spectral Convolutional Networks: Application to Sex Classification with Brain Connectivity Salim Arslan S. Ktena Ben Glocker Daniel Rueckert GNN 56 53 0 05 Jun 2018
Disease Prediction using Graph Convolutional Networks: Application to Autism Spectrum Disorder and Alzheimer's Disease Sarah Parisot S. Ktena Enzo Ferrante M. J. Lee Ricardo Guerrero Ben Glocker Daniel Rueckert MedIm 80 536 0 05 Jun 2018
Brain Age Prediction Based on Resting-State Functional Connectivity Patterns Using Convolutional Neural Networks Hongming Li T. Satterthwaite Yong-Xian Fan 53 78 0 11 Jan 2018
Learning Neural Representations of Human Cognition across Many fMRI Studies G. Flandin D. Handwerker Michael Hanke D. Keator Thomas E. Nichols AI4CE 51 45 0 31 Oct 2017
Resting state fMRI functional connectivity-based classification using a convolutional neural network architecture R. Meszlényi Krisztián Búza Zoltán Vidnyánszky 20 111 0 20 Jul 2017
Attention Is All You Need Ashish Vaswani Noam M. Shazeer Niki Parmar Jakob Uszkoreit Llion Jones Aidan Gomez Lukasz Kaiser Illia Polosukhin 3DV 808 132,725 0 12 Jun 2017
Spectral Graph Convolutions for Population-based Disease Prediction Sarah Parisot S. Ktena Enzo Ferrante M. J. Lee Ricardo Guerrero Ben Glocker Daniel Rueckert MedIm 83 212 0 08 Mar 2017
Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example Alexandre Abraham M. Milham A. di Martino Cameron R. Craddock Dimitris Samaras Bertrand Thirion Gaël Varoquaux 68 575 0 18 Nov 2016
Classification of Alzheimer's Disease using fMRI Data and Deep Learning Convolutional Neural Networks S. Sarraf Ghassem Tofighi OOD 42 220 0 29 Mar 2016
Deep learning of fMRI big data: a novel approach to subject-transfer decoding Sotetsu Koyamada Yumi Shikauchi Ken Nakae Masanori Koyama S. Ishii 78 69 0 31 Jan 2015