LinkBERT: Pretraining Language Models with Document Links

29 March 2022

Papers citing "LinkBERT: Pretraining Language Models with Document Links"

50 / 164 papers shown

Title
Knowledge-augmented Pre-trained Language Models for Biomedical Relation Extraction Mario Sanger Ulf Leser 45 0 0 01 May 2025
Reduction of Supervision for Biomedical Knowledge Discovery Christos Theodoropoulos Andrei Catalin Coman James Henderson Marie-Francine Moens 25 0 0 13 Apr 2025
WHERE and WHICH: Iterative Debate for Biomedical Synthetic Data Augmentation Zhengyi Zhao Shubo Zhang Bin Liang Binyang Li Kam-Fai Wong SyDa 56 0 0 31 Mar 2025
Self-Evolving Multi-Agent Simulations for Realistic Clinical Interactions Mohammad Almansoori Kemal Kurniawan Hisham Cholakkal 141 0 0 28 Mar 2025
Unifying Text Semantics and Graph Structures for Temporal Text-attributed Graphs with Large Language Models Siwei Zhang Yun Xiong Yateng Tang Xi Chen Zian Jia Zehao Gu Jiarong Xu Jiawei Zhang AI4CE 75 1 0 18 Mar 2025
Can Frontier LLMs Replace Annotators in Biomedical Text Mining? Analyzing Challenges and Exploring Solutions Yichong Zhao Susumu Goto 62 0 0 05 Mar 2025
Pub-Guard-LLM: Detecting Fraudulent Biomedical Articles with Reliable Explanations Lihu Chen Shuojie Fu Gabriel Freedman Cemre Zor Guy Martin James Kinross Uddhav Vaghela Ovidiu Serban Francesca Toni DeLMO 68 0 0 21 Feb 2025
Hierarchical Graph Topic Modeling with Topic Tree-based Transformer Delvin Ce Zhang Menglin Yang Xiaobao Wu Jiasheng Zhang Hady W. Lauw 48 0 0 17 Feb 2025
What Are They Filtering Out? A Survey of Filtering Strategies for Harm Reduction in Pretraining Datasets Marco Antonio Stranisci Christian Hardmeier 55 0 0 17 Feb 2025
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics Kai He Rui Mao Qika Lin Yucheng Ruan Xiang Lan Mengling Feng Erik Cambria LM&MA AILaw 93 154 0 28 Jan 2025
HierPromptLM: A Pure PLM-based Framework for Representation Learning on Heterogeneous Text-rich Networks Qiuyu Zhu Liang Zhang Qianxiong Xu Cheng Long 171 2 0 22 Jan 2025
Neuro-Symbolic AI in 2024: A Systematic Review Brandon C. Colelough William Regli NAI 65 9 0 09 Jan 2025
Information Anxiety in Large Language Models Prasoon Bajpai Sarah Masud Tanmoy Chakraborty 37 0 0 16 Nov 2024
MDCure: A Scalable Pipeline for Multi-Document Instruction-Following Gabrielle Kaili-May Liu Bowen Shi Avi Caciularu Idan Szpektor Arman Cohan 72 4 0 30 Oct 2024
Privately Learning from Graphs with Applications in Fine-tuning Large Language Models Haoteng Yin Rongzhe Wei Eli Chien P. Li 28 0 0 10 Oct 2024
Instructional Segment Embedding: Improving LLM Safety with Instruction Hierarchy Tong Wu Shujian Zhang Kaiqiang Song Silei Xu Sanqiang Zhao Ravi Agrawal Sathish Indurthi Chong Xiang Prateek Mittal Wenxuan Zhou 42 8 0 09 Oct 2024
GADFA: Generator-Assisted Decision-Focused Approach for Opinion Expressing Timing Identification Chung-Chi Chen Hiroya Takamura Ichiro Kobayashi Yusuke Miyao 29 0 0 02 Oct 2024
DiMB-RE: Mining the Scientific Literature for Diet-Microbiome Associations Gibong Hong Veronica Hindle Nadine M. Veasley Hannah D. Holscher Halil Kilicoglu AI4CE 48 0 0 29 Sep 2024
KALE-LM: Unleash The Power Of AI For Science Via Knowledge And Logic Enhanced Large Model Weichen Dai Yezeng Chen Zijie Dai Zhijie Huang Yong-Jin Liu ... Chengli Zhong Xinhe Li Zeyu Wang Zhuoying Feng Yi Zhou 35 0 0 27 Sep 2024
A Survey of Spatio-Temporal EEG data Analysis: from Models to Applications Pengfei Wang Huanran Zheng Silong Dai Yiqiao Wang Xiaotian Gu Yuanbin Wu Xiaoling Wang SyDa AI4TS 45 3 0 26 Sep 2024
AlpaPICO: Extraction of PICO Frames from Clinical Trial Documents Using LLMs Madhusudan Ghosh Shrimon Mukherjee Asmit Ganguly Partha Basuchowdhuri S. Naskar Debasis Ganguly 34 7 0 15 Sep 2024
A New Era in Computational Pathology: A Survey on Foundation and Vision-Language Models Dibaloke Chanda Milan Aryal Nasim Yahya Soltani Masoud Ganji AI4CE VLM 44 7 0 23 Aug 2024
Threshold Filtering Packing for Supervised Fine-Tuning: Training Related Samples within Packs Jiancheng Dong Lei Jiang Wei Jin Lu Cheng 41 1 0 18 Aug 2024
Medical Graph RAG: Towards Safe Medical Large Language Model via Graph Retrieval-Augmented Generation Junde Wu Jiayuan Zhu Yunli Qi 34 24 0 08 Aug 2024
Multi-modal Data Binding for Survival Analysis Modeling with Incomplete Data and Annotations Linhao Qu Dan Huang Shaoting Zhang Xiaosong Wang 34 2 0 25 Jul 2024
Pre-Training and Prompting for Few-Shot Node Classification on Text-Attributed Graphs Huan-jing Zhao Beining Yang Yukuo Cen Junyu Ren Chenhui Zhang Yuxiao Dong Evgeny Kharlamov Shu Zhao Jie Tang VLM 54 7 0 22 Jul 2024
Building an Ethical and Trustworthy Biomedical AI Ecosystem for the Translational and Clinical Integration of Foundational Models Simha Sankar Baradwaj Destiny Gilliland Jack Rincon Henning Hermjakob Yu Yan ... Dean Wang Karol Watson Alex Bui Wei Wang Peipei Ping 45 5 0 18 Jul 2024
Using LLMs to label medical papers according to the CIViC evidence model Markus Hisch Xing David Wang 47 0 0 05 Jul 2024
Boosting Biomedical Concept Extraction by Rule-Based Data Augmentation Qiwei Shao Fengran Mo Jian-Yun Nie MedIm 48 0 0 03 Jul 2024
Extracting and Encoding: Leveraging Large Language Models and Medical Knowledge to Enhance Radiological Text Representation Pablo Messina René Vidal Denis Parra Álvaro Soto Vladimir Araujo MedIm 58 2 0 02 Jul 2024
Enhancing Collaborative Semantics of Language Model-Driven Recommendations via Graph-Aware Learning Zhong Guan Likang Wu Hongke Zhao Ming He Jianpin Fan 48 3 0 19 Jun 2024
DTGB: A Comprehensive Benchmark for Dynamic Text-Attributed Graphs Jiasheng Zhang Jialin Chen Menglin Yang Aosong Feng Shuang Liang Jie Shao Rex Ying 37 10 0 17 Jun 2024
A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery Yu Zhang Xiusi Chen Bowen Jin Sheng Wang Shuiwang Ji Wei Wang Jiawei Han 44 27 0 16 Jun 2024
Text-space Graph Foundation Models: Comprehensive Benchmarks and New Insights Zhikai Chen Haitao Mao Jingzhe Liu Yu Song Bingheng Li ... Bahare Fatemi Anton Tsitsulin Bryan Perozzi Hui Liu Jiliang Tang 33 9 0 15 Jun 2024
LT4SG@SMM4H24: Tweets Classification for Digital Epidemiology of Childhood Health Outcomes Using Pre-Trained Language Models Dasun Athukoralage Thushari Atapattu M. Thilakaratne Katrina Falkner LM&MA 20 0 0 11 Jun 2024
Pointer-Guided Pre-Training: Infusing Large Language Models with Paragraph-Level Contextual Awareness L. Hillebrand Prabhupad Pradhan Christian Bauckhage R. Sifa 21 0 0 06 Jun 2024
FinGen: A Dataset for Argument Generation in Finance Chung-Chi Chen Hiroya Takamura Ichiro Kobayashi Yusuke Miyao 34 0 0 31 May 2024
Entangled Relations: Leveraging NLI and Meta-analysis to Enhance Biomedical Relation Extraction William Hogan Jingbo Shang 18 0 0 31 May 2024
Towards Ontology-Enhanced Representation Learning for Large Language Models Francesco Ronzano Jay Nanavati 28 4 0 30 May 2024
Edinburgh Clinical NLP at MEDIQA-CORR 2024: Guiding Large Language Models with Hints Aryo Pradipta Gema Chaeeun Lee Pasquale Minervini Luke Daines T. I. Simpson Beatrice Alex 34 1 0 28 May 2024
ECG Semantic Integrator (ESI): A Foundation ECG Model Pretrained with LLM-Enhanced Cardiological Text Han Yu Peikun Guo Akane Sano 34 16 0 26 May 2024
RAG-RLRC-LaySum at BioLaySumm: Integrating Retrieval-Augmented Generation and Readability Control for Layman Summarization of Biomedical Texts Yuelyu Ji Zhuochun Li Rui Meng Sonish Sivarajkumar Yanshan Wang Zeshui Yu Hui Ji Yushui Han Hanyu Zeng Daqing He 25 17 0 21 May 2024
Towards Knowledge-Infused Automated Disease Diagnosis Assistant Mohit Tomar Abhisek Tiwari Sriparna Saha MedIm 26 3 0 18 May 2024
DMON: A Simple yet Effective Approach for Argument Structure Learning Wei Sun Mingxiao Li Jingyuan Sun Jesse Davis Marie-Francine Moens 41 0 0 02 May 2024
VANER: Leveraging Large Language Model for Versatile and Adaptive Biomedical Named Entity Recognition Junyi Bian W. Zhai Xiaodi Huang Jiaxuan Zheng Shanfeng Zhu 37 2 0 27 Apr 2024
PRISM: Patient Records Interpretation for Semantic Clinical Trial Matching using Large Language Models Shashi Kant Gupta Aditya Basu Mauro Nievas Jerrin Thomas Nathan Wolfrath ... Regina Schwind Therica M. Miller Sorena Nadaf-Rahrov Yanshan Wang Hrituraj Singh LM&MA 44 8 0 23 Apr 2024
Retrieval-Augmented Embodied Agents Yichen Zhu Zhicai Ou Xiaofeng Mou Jian Tang 51 17 0 17 Apr 2024
Unveiling LLM Evaluation Focused on Metrics: Challenges and Solutions Taojun Hu Xiao-Hua Zhou ELM 41 12 0 14 Apr 2024
Medical mT5: An Open-Source Multilingual Text-to-Text LLM for The Medical Domain Iker García-Ferrero Rodrigo Agerri Aitziber Atutxa Salazar Elena Cabrio Iker de la Iglesia ... Johana Ramirez-Romero German Rigau J. M. Villa-Gonzalez S. Villata Andrea Zaninello 86 19 0 11 Apr 2024
IITK at SemEval-2024 Task 2: Exploring the Capabilities of LLMs for Safe Biomedical Natural Language Inference for Clinical Trials Shreyasi Mandal Ashutosh Modi LRM ELM 36 3 0 06 Apr 2024