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A persistent homology-based topological loss for CNN-based multi-class segmentation of CMR

27 July 2021

Papers citing "A persistent homology-based topological loss for CNN-based multi-class segmentation of CMR"

23 / 23 papers shown

Title
TopoDiffusionNet: A Topology-aware Diffusion Model Saumya Gupta Dimitris Samaras Chong Chen DiffM 120 4 0 22 Oct 2024
ImageCHD: A 3D Computed Tomography Image Dataset for Classification of Congenital Heart Disease Xiaowei Xu Tianchen Wang Zhuang Jian Haiyun Yuan Meiping Huang J. Cen Qianjun Jia Yuhao Dong Yiyu Shi 3DH 36 29 0 26 Jan 2021
TDA-Net: Fusion of Persistent Homology and Deep Learning Features for COVID-19 Detection in Chest X-Ray Images Mustafa Hajij Ghada Zamzmi F. Batayneh 57 24 0 21 Jan 2021
A persistent homology-based topological loss function for multi-class CNN segmentation of cardiac MRI Nicholas Byrne J. Clough Giovanni Montana A. King 28 27 0 21 Aug 2020
Deep Small Bowel Segmentation with Cylindrical Topological Constraints Seung Yeon Shin Sungwon Lee Daniel C. Elton J. Gulley Ronald M. Summers 48 24 0 16 Jul 2020
MvMM-RegNet: A new image registration framework based on multivariate mixture model and neural network estimation Xinzhe Luo Xiahai Zhuang 62 17 0 28 Jun 2020
Cardiac Segmentation with Strong Anatomical Guarantees Nathan Painchaud Youssef Skandarani Thierry Judge Olivier Bernard A. Lalande Pierre-Marc Jodoin 58 101 0 15 Jun 2020
Cubical Ripser: Software for computing persistent homology of image and volume data S. Kaji Takeki Sudo K. Ahara 37 38 0 23 May 2020
Duality in Persistent Homology of Images A. Garin T. Heiss K. Maggs B. Bleile V. Robins 28 15 0 10 May 2020
Deep learning for cardiac image segmentation: A review Chen Chen C. Qin Huaqi Qiu G. Tarroni Jinming Duan Wenjia Bai Daniel Rueckert SSeg 3DV 110 684 0 09 Nov 2019
A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology J. Clough Nicholas Byrne Ilkay Oksuz Zhenzhong Lan Julia A. Schnabel A. King 63 221 0 04 Oct 2019
Cardiac MRI Segmentation with Strong Anatomical Guarantees Nathan Painchaud Youssef Skandarani Thierry Judge Olivier Bernard A. Lalande Pierre-Marc Jodoin 35 63 0 05 Jul 2019
Connectivity-Optimized Representation Learning via Persistent Homology Christoph Hofer Roland Kwitt Mandar Dixit Marc Niethammer 60 77 0 21 Jun 2019
Topology-Preserving Deep Image Segmentation Xiaoling Hu Fuxin Li Dimitris Samaras Chao Chen 45 279 0 12 Jun 2019
A Topology Layer for Machine Learning Rickard Brüel-Gabrielsson Bradley J. Nelson Anjan Dwaraknath Primoz Skraba Leonidas Guibas Gunnar Carlsson AI4CE 69 133 0 29 May 2019
Evaluation of Algorithms for Multi-Modality Whole Heart Segmentation: An Open-Access Grand Challenge Xiahai Zhuang Lei Li Christian Payer Darko Štern M. Urschler ... Sebastien Ourselin R. Mohiaddin J. Keegan D. Firmin Guang Yang 79 272 0 21 Feb 2019
Explicit topological priors for deep-learning based image segmentation using persistent homology J. Clough Ilkay Oksuz Nicholas Byrne Julia A. Schnabel A. King 58 67 0 29 Jan 2019
nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation Fabian Isensee Jens Petersen André Klein David Zimmerer Paul F. Jaeger ... Jakob Wasserthal Gregor Koehler T. Norajitra Sebastian J. Wirkert Klaus H. Maier-Hein SSeg 93 789 0 27 Sep 2018
Uncertainty Quantification in CNN-Based Surface Prediction Using Shape Priors Katarína Tóthová Sarah Parisot M. J. Lee Esther Puyol-Antón Lisa M. Koch A. King E. Konukoglu Marc Pollefeys UQCV 48 21 0 30 Jul 2018
Deep Learning with Topological Signatures Christoph Hofer Roland Kwitt Marc Niethammer A. Uhl 3DPC 62 244 0 13 Jul 2017
Anatomically Constrained Neural Networks (ACNN): Application to Cardiac Image Enhancement and Segmentation Ozan Oktay Enzo Ferrante Konstantinos Kamnitsas M. Heinrich Wenjia Bai ... T. Dawes D. O’Regan Bernhard Kainz Ben Glocker Daniel Rueckert 62 658 0 22 May 2017
3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation Özgün Çiçek Ahmed Abdulkadir S. Lienkamp Thomas Brox Olaf Ronneberger 3DV 3DPC SSeg 3DH 155 6,551 0 21 Jun 2016
U-Net: Convolutional Networks for Biomedical Image Segmentation Olaf Ronneberger Philipp Fischer Thomas Brox SSeg 3DV 1.9K 77,378 0 18 May 2015