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The Medical Segmentation Decathlon

The Medical Segmentation Decathlon

10 June 2021
Michela Antonelli
Annika Reinke
Spyridon Bakas
Keyvan Farahani
AnnetteKopp-Schneider
Bennett A. Landman
G. Litjens
Bjoern H. Menze
Olaf Ronneberger
Ronald M.Summers
Bram van Ginneken
Michel Bilello
Patrick Bilic
P. Christ
Richard K G Do
M. Gollub
S. Heckers
Henkjan Huisman
William R. Jarnagin
M. McHugo
S. Napel
Jennifer S. Goli Pernicka
K. Rhode
C. Tobon-Gomez
Eugene Vorontsov
Henkjan Huisman
J. Meakin
Sebastien Ourselin
Manuel Wiesenfarth
Pablo Arbelaez
Byeonguk Bae
Sihong Chen
Laura Alexandra Daza
Jian-Jun Feng
Baochun He
Fabian Isensee
Yuanfeng Ji
F. Jia
Namkug Kim
Ildoo Kim
Dorit Merhof
A. Pai
Beomhee Park
Mathias Perslev
R. Rezaiifar
Oliver Rippel
Ignacio Sarasua
Wei Shen
Jaemin Son
Christian Wachinger
Liansheng Wang
Yan Wang
Yingda Xia
Daguang Xu
Zhanwei Xu
Yefeng Zheng
Amber L. Simpson
Lena Maier-Hein
M. Jorge Cardoso
    OOD
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Papers citing "The Medical Segmentation Decathlon"

50 / 395 papers shown
Title
Revisiting MAE pre-training for 3D medical image segmentation
Revisiting MAE pre-training for 3D medical image segmentation
Tassilo Wald
Constantin Ulrich
Stanislav Lukyanenko
Andrei Goncharov
Alberto Paderno
Leander Maerkisch
Paul F. Jäger
Paul F. Jäger
Klaus Maier-Hein
50
2
0
30 Oct 2024
Anatomical 3D Style Transfer Enabling Efficient Federated Learning with
  Extremely Low Communication Costs
Anatomical 3D Style Transfer Enabling Efficient Federated Learning with Extremely Low Communication Costs
Yuto Shibata
Yasunori Kudo
Yohei Sugawara
21
0
0
26 Oct 2024
Unleashing the Potential of Vision-Language Pre-Training for 3D Zero-Shot Lesion Segmentation via Mask-Attribute Alignment
Unleashing the Potential of Vision-Language Pre-Training for 3D Zero-Shot Lesion Segmentation via Mask-Attribute Alignment
Yankai Jiang
Wenhui Lei
Xiaofan Zhang
S. Zhang
MedIm
40
2
0
21 Oct 2024
Taming Mambas for Voxel Level 3D Medical Image Segmentation
Taming Mambas for Voxel Level 3D Medical Image Segmentation
Luca Lumetti
Vittorio Pipoli
Kevin Marchesini
Elisa Ficarra
C. Grana
Federico Bolelli
MedIm
Mamba
29
0
0
20 Oct 2024
MedDiff-FM: A Diffusion-based Foundation Model for Versatile Medical
  Image Applications
MedDiff-FM: A Diffusion-based Foundation Model for Versatile Medical Image Applications
Yongrui Yu
Yannian Gu
S. Zhang
Xiaofan Zhang
MedIm
41
2
0
20 Oct 2024
Improving 3D Medical Image Segmentation at Boundary Regions using Local
  Self-attention and Global Volume Mixing
Improving 3D Medical Image Segmentation at Boundary Regions using Local Self-attention and Global Volume Mixing
Daniya Najiha Abdul Kareem
M. Fiaz
Noa Novershtern
Jacob Hanna
Hisham Cholakkal
44
3
0
20 Oct 2024
Large-Scale 3D Medical Image Pre-training with Geometric Context Priors
Large-Scale 3D Medical Image Pre-training with Geometric Context Priors
Linshan Wu
Jiaxin Zhuang
Hao Chen
41
5
0
13 Oct 2024
ONCOPILOT: A Promptable CT Foundation Model For Solid Tumor Evaluation
ONCOPILOT: A Promptable CT Foundation Model For Solid Tumor Evaluation
Léo Machado
Hélène Philippe
Elodie Ferreres
Julien Khlaut
Julie Dupuis
...
Corentin Dancette
Daniel Tordjman
Pierre Manceron
Paul Hérent
Paul Hérent
47
0
0
10 Oct 2024
MedImageInsight: An Open-Source Embedding Model for General Domain
  Medical Imaging
MedImageInsight: An Open-Source Embedding Model for General Domain Medical Imaging
Noel C. F. Codella
Ying Jin
Shrey Jain
Yu Gu
Ho Hin Lee
...
Jenq-Neng Hwang
Thomas Lin
Ivan Tarapov
M. Lungren
Mu-Hsin Wei
LM&MA
VLM
MedIm
45
8
0
09 Oct 2024
MedUniSeg: 2D and 3D Medical Image Segmentation via a Prompt-driven
  Universal Model
MedUniSeg: 2D and 3D Medical Image Segmentation via a Prompt-driven Universal Model
Yiwen Ye
Ziyang Chen
Jianpeng Zhang
Yutong Xie
Yong Xia
MedIm
39
3
0
08 Oct 2024
Metrics Revolutions: Groundbreaking Insights into the Implementation of
  Metrics for Biomedical Image Segmentation
Metrics Revolutions: Groundbreaking Insights into the Implementation of Metrics for Biomedical Image Segmentation
Gašper Podobnik
Tomaž Vrtovec
19
0
0
03 Oct 2024
SynCo: Synthetic Hard Negatives in Contrastive Learning for Better
  Unsupervised Visual Representations
SynCo: Synthetic Hard Negatives in Contrastive Learning for Better Unsupervised Visual Representations
Nikolaos Giakoumoglou
Tania Stathaki
SSL
46
2
0
03 Oct 2024
DMC-Net: Lightweight Dynamic Multi-Scale and Multi-Resolution
  Convolution Network for Pancreas Segmentation in CT Images
DMC-Net: Lightweight Dynamic Multi-Scale and Multi-Resolution Convolution Network for Pancreas Segmentation in CT Images
Jin Yang
Daniel S. Marcus
Aristeidis Sotiras
32
0
0
03 Oct 2024
Segment as You Wish -- Free-Form Language-Based Segmentation for Medical
  Images
Segment as You Wish -- Free-Form Language-Based Segmentation for Medical Images
Longchao Da
Rui Wang
Xiaojian Xu
Parminder Bhatia
Taha A. Kass-Hout
Hua Wei
Cao Xiao
VLM
MedIm
46
2
0
02 Oct 2024
Y-CA-Net: A Convolutional Attention Based Network for Volumetric Medical
  Image Segmentation
Y-CA-Net: A Convolutional Attention Based Network for Volumetric Medical Image Segmentation
Muhammad Hamza Sharif
Muzammal Naseer
Mohammad Yaqub
Min Xu
Mohsen Guizani
OOD
MedIm
ViT
36
0
0
01 Oct 2024
AI generated annotations for Breast, Brain, Liver, Lungs and Prostate
  cancer collections in National Cancer Institute Imaging Data Commons
AI generated annotations for Breast, Brain, Liver, Lungs and Prostate cancer collections in National Cancer Institute Imaging Data Commons
G. Murugesan
Diana McCrumb
Rahul Soni
J. Kumar
Leonard Nuernberg
...
Ulrike Wagner
Sutton Granger
Andrey Y. Fedorov
Stephen Moore
Jeff Van Oss
28
0
0
30 Sep 2024
Medical Image Segmentation with SAM-generated Annotations
Medical Image Segmentation with SAM-generated Annotations
Iira Häkkinen
Iaroslav Melekhov
Erik Englesson
Hossein Azizpour
Arno Solin
VLM
33
0
0
30 Sep 2024
LoRKD: Low-Rank Knowledge Decomposition for Medical Foundation Models
LoRKD: Low-Rank Knowledge Decomposition for Medical Foundation Models
Haolin Li
Yuhang Zhou
Ziheng Zhao
Siyuan Du
Jiangchao Yao
Weidi Xie
Ya Zhang
Yanfeng Wang
31
1
0
29 Sep 2024
Confidence intervals uncovered: Are we ready for real-world medical
  imaging AI?
Confidence intervals uncovered: Are we ready for real-world medical imaging AI?
Evangelia Christodoulou
Annika Reinke
Rola Houhou
P. Kalinowski
Selen Erkan
...
Paul F. Jäger
Annette Kopp-Schneider
Gaël Varoquaux
O. Colliot
Lena Maier-Hein
OOD
26
3
0
26 Sep 2024
Lesion Segmentation in Whole-Body Multi-Tracer PET-CT Images; a
  Contribution to AutoPET 2024 Challenge
Lesion Segmentation in Whole-Body Multi-Tracer PET-CT Images; a Contribution to AutoPET 2024 Challenge
M. Astaraki
Simone Bendazzoli
MedIm
16
0
0
22 Sep 2024
Data Diet: Can Trimming PET/CT Datasets Enhance Lesion Segmentation?
Data Diet: Can Trimming PET/CT Datasets Enhance Lesion Segmentation?
A. Jaus
Simon Reiß
Jens Klesiek
Rainer Stiefelhagen
3DPC
23
0
0
20 Sep 2024
MCICSAM: Monte Carlo-guided Interpolation Consistency Segment Anything
  Model for Semi-Supervised Prostate Zone Segmentation
MCICSAM: Monte Carlo-guided Interpolation Consistency Segment Anything Model for Semi-Supervised Prostate Zone Segmentation
Guantian Huang
Beibei Li
Xiaobing Fan
Aritrick Chatterjee
Cheng Wei
Shouliang Qi
Wei Qian
Dianning He
21
0
0
20 Sep 2024
Privacy-Preserving SAM Quantization for Efficient Edge Intelligence in
  Healthcare
Privacy-Preserving SAM Quantization for Efficient Edge Intelligence in Healthcare
Zhikai Li
Jing Zhang
Qingyi Gu
MedIm
44
1
0
14 Sep 2024
MAISI: Medical AI for Synthetic Imaging
MAISI: Medical AI for Synthetic Imaging
Pengfei Guo
Can Zhao
Dong Yang
Ziyue Xu
Vishwesh Nath
...
Benjamin D. Simon
Mason J Belue
Stephanie Harmon
B. Turkbey
Daguang Xu
DiffM
MedIm
44
18
0
13 Sep 2024
D2-MLP: Dynamic Decomposed MLP Mixer for Medical Image Segmentation
D2-MLP: Dynamic Decomposed MLP Mixer for Medical Image Segmentation
Jin Yang
Xiaobing Yu
Peijie Qiu
MedIm
36
0
0
13 Sep 2024
Analyzing Tumors by Synthesis
Analyzing Tumors by Synthesis
Qi Chen
Yuxiang Lai
Xiaoxi Chen
Qixin Hu
Alan Yuille
Zongwei Zhou
33
3
0
09 Sep 2024
Improving Uncertainty-Error Correspondence in Deep Bayesian Medical
  Image Segmentation
Improving Uncertainty-Error Correspondence in Deep Bayesian Medical Image Segmentation
P. Mody
Nicolas F. Chaves-de-Plaza
Chinmay Rao
Eleftheria Astrenidou
M. de Ridder
N. Hoekstra
Klaus Hildebrandt
Marius Staring
UQCV
27
0
0
05 Sep 2024
Diffusion-Driven Data Replay: A Novel Approach to Combat Forgetting in
  Federated Class Continual Learning
Diffusion-Driven Data Replay: A Novel Approach to Combat Forgetting in Federated Class Continual Learning
Jinglin Liang
Jin Zhong
Hanlin Gu
Zhongqi Lu
Xingxing Tang
Gang Dai
Shuangping Huang
Lixin Fan
Qiang Yang
DiffM
44
7
0
02 Sep 2024
Generative AI Enables Medical Image Segmentation in Ultra Low-Data
  Regimes
Generative AI Enables Medical Image Segmentation in Ultra Low-Data Regimes
Li Zhang
Basu Jindal
Ahmed Alaa
Robert Weinreb
David Wilson
Eran Segal
James Zou
Pengtao Xie
MedIm
29
1
0
30 Aug 2024
PropSAM: A Propagation-Based Model for Segmenting Any 3D Objects in
  Multi-Modal Medical Images
PropSAM: A Propagation-Based Model for Segmenting Any 3D Objects in Multi-Modal Medical Images
Zifan Chen
Xinyu Nan
Jiazheng Li
Jie Zhao
Haifeng Li
...
Heyun Chen
Yiting Liu
Bin Dong
Li Lyna Zhang
L. Tang
MedIm
48
1
0
25 Aug 2024
Unleashing the Potential of SAM2 for Biomedical Images and Videos: A
  Survey
Unleashing the Potential of SAM2 for Biomedical Images and Videos: A Survey
Yichi Zhang
Zhenrong Shen
VLM
30
12
0
23 Aug 2024
MultiMed: Massively Multimodal and Multitask Medical Understanding
MultiMed: Massively Multimodal and Multitask Medical Understanding
Shentong Mo
Paul Pu Liang
LM&MA
30
0
0
22 Aug 2024
Automatic Organ and Pan-cancer Segmentation in Abdomen CT: the FLARE
  2023 Challenge
Automatic Organ and Pan-cancer Segmentation in Abdomen CT: the FLARE 2023 Challenge
Jun Ma
Yao Zhang
Song Gu
Cheng Ge
Ershuai Wang
Qin Zhou
Ziyan Huang
Pengju Lyu
Jian He
Bo Wang
42
7
0
22 Aug 2024
A Short Review and Evaluation of SAM2's Performance in 3D CT Image
  Segmentation
A Short Review and Evaluation of SAM2's Performance in 3D CT Image Segmentation
Yufan He
Pengfei Guo
Yucheng Tang
Andriy Myronenko
Vishwesh Nath
Ziyue Xu
Dong Yang
Can Zhao
Daguang Xu
Wenqi Li
23
4
0
20 Aug 2024
ISLES'24: Improving final infarct prediction in ischemic stroke using
  multimodal imaging and clinical data
ISLES'24: Improving final infarct prediction in ischemic stroke using multimodal imaging and clinical data
Ezequiel de la Rosa
Ruisheng Su
Mauricio Reyes
Roland Wiest
E. O. Riedel
...
D. Robben
Susanne Wegener
Jan S. Kirschke
Benedikt Wiestler
Bjoern H. Menze
OOD
17
1
0
20 Aug 2024
LNQ 2023 challenge: Benchmark of weakly-supervised techniques for mediastinal lymph node quantification
LNQ 2023 challenge: Benchmark of weakly-supervised techniques for mediastinal lymph node quantification
R. Dorent
Roya Khajavi
Tagwa Idris
Erik Ziegler
B. Somarouthu
...
Minghui Zhang
Steve Pieper
Gordon Harris
Ron Kikinis
Tina Kapur
44
5
0
19 Aug 2024
Enhancing 3D Transformer Segmentation Model for Medical Image with
  Token-level Representation Learning
Enhancing 3D Transformer Segmentation Model for Medical Image with Token-level Representation Learning
Xinrong Hu
Dewen Zeng
Yawen Wu
Xueyang Li
Yiyu Shi
ViT
MedIm
39
0
0
12 Aug 2024
HySparK: Hybrid Sparse Masking for Large Scale Medical Image
  Pre-Training
HySparK: Hybrid Sparse Masking for Large Scale Medical Image Pre-Training
Fenghe Tang
Ronghao Xu
Qingsong Yao
Xueming Fu
Quan Quan
Heqin Zhu
Zaiyi Liu
S. Kevin Zhou
SSL
MedIm
40
3
0
11 Aug 2024
A Novel Momentum-Based Deep Learning Techniques for Medical Image
  Classification and Segmentation
A Novel Momentum-Based Deep Learning Techniques for Medical Image Classification and Segmentation
Koushik Biswas
Ridal Pal
Shaswat Patel
Debesh Jha
Meghana Karri
...
M. Antalek
Yury Velichko
Daniela Ladner
Amir Borhani
Ulas Bagci
34
0
0
11 Aug 2024
Quantifying the Impact of Population Shift Across Age and Sex for
  Abdominal Organ Segmentation
Quantifying the Impact of Population Shift Across Age and Sex for Abdominal Organ Segmentation
Kate Čevora
Ben Glocker
Wenjia Bai
OOD
28
0
0
08 Aug 2024
Distillation Learning Guided by Image Reconstruction for One-Shot Medical Image Segmentation
Distillation Learning Guided by Image Reconstruction for One-Shot Medical Image Segmentation
Feng Zhou
Yanjie Zhou
Longjie Wang
Yun Peng
David E. Carlson
Liyun Tu
45
1
0
07 Aug 2024
Interactive 3D Medical Image Segmentation with SAM 2
Interactive 3D Medical Image Segmentation with SAM 2
Chuyun Shen
Wenhao Li
Yuhang Shi
Xiangfeng Wang
VLM
MedIm
28
13
0
05 Aug 2024
MSA$^2$Net: Multi-scale Adaptive Attention-guided Network for Medical
  Image Segmentation
MSA2^22Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation
Sina Ghorbani Kolahi
S. K. Chaharsooghi
Toktam Khatibi
Afshin Bozorgpour
Reza Azad
Moein Heidari
I. Hacihaliloglu
Dorit Merhof
32
0
0
31 Jul 2024
Expanding the Medical Decathlon dataset: segmentation of colon and
  colorectal cancer from computed tomography images
Expanding the Medical Decathlon dataset: segmentation of colon and colorectal cancer from computed tomography images
Miao Cao
Y. A. Drach
S. R. Mustakimova
Huan Wang
Xin Yuan
S. K. Efetov
M. V. Feldsherov
30
0
0
31 Jul 2024
MIST: A Simple and Scalable End-To-End 3D Medical Imaging Segmentation
  Framework
MIST: A Simple and Scalable End-To-End 3D Medical Imaging Segmentation Framework
Jingyao Wu
Evan Lim
T. Dang
Brayden Mi
Alex Balsells
V. Sethu
Caroline Chung
Beatrice Riviere
David T. Fuentes
VLM
41
2
0
31 Jul 2024
Distribution-Aware Replay for Continual MRI Segmentation
Distribution-Aware Replay for Continual MRI Segmentation
Nick Lemke
Camila González
Anirban Mukhopadhyay
Martin Mundt
OOD
33
0
0
30 Jul 2024
Optimizing Synthetic Data for Enhanced Pancreatic Tumor Segmentation
Optimizing Synthetic Data for Enhanced Pancreatic Tumor Segmentation
Linkai Peng
Zheyuan Zhang
Gorkem Durak
Frank H. Miller
A. Medetalibeyoğlu
Michael B. Wallace
Ulas Bagci
MedIm
34
2
0
27 Jul 2024
Aggregated Attributions for Explanatory Analysis of 3D Segmentation
  Models
Aggregated Attributions for Explanatory Analysis of 3D Segmentation Models
Maciej Chrabaszcz
Hubert Baniecki
Piotr Komorowski
Szymon Płotka
Przemysław Biecek
31
1
0
23 Jul 2024
MedSAGa: Few-shot Memory Efficient Medical Image Segmentation using
  Gradient Low-Rank Projection in SAM
MedSAGa: Few-shot Memory Efficient Medical Image Segmentation using Gradient Low-Rank Projection in SAM
Navyansh Mahla
Annie D'souza
Shubh Gupta
B. Kanekar
Kshitij S. Jadhav
VLM
MedIm
29
2
0
21 Jul 2024
CBCTLiTS: A Synthetic, Paired CBCT/CT Dataset For Segmentation And Style
  Transfer
CBCTLiTS: A Synthetic, Paired CBCT/CT Dataset For Segmentation And Style Transfer
M. Tschuchnig
Philipp Steininger
M. Gadermayr
18
0
0
20 Jul 2024
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