GraphFormers: GNN-nested Transformers for Representation Learning on Textual Graph

6 May 2021

Zheng Liu

Defu Lian

Xing Xie

Papers citing "GraphFormers: GNN-nested Transformers for Representation Learning on Textual Graph"

33 / 33 papers shown

Title
Attention Mechanisms Perspective: Exploring LLM Processing of Graph-Structured Data Zhong Guan Likang Wu Hongke Zhao Ming He Jianpin Fan GNN 42 0 0 04 May 2025
Graph Synthetic Out-of-Distribution Exposure with Large Language Models Haoyan Xu Zhengtao Yao Ziyi Wang Zhan Cheng Xiyang Hu Mengyuan Li Yue Zhao OODD 55 1 0 29 Apr 2025
Integrating Structural and Semantic Signals in Text-Attributed Graphs with BiGTex Azadeh Beiranvand Seyed Mehdi Vahidipour 36 0 0 16 Apr 2025
Unifying Text Semantics and Graph Structures for Temporal Text-attributed Graphs with Large Language Models Siwei Zhang Yun Xiong Yateng Tang Xi Chen Zian Jia Zehao Gu Jiarong Xu Jiawei Zhang AI4CE 77 1 0 18 Mar 2025
A Survey of Graph Transformers: Architectures, Theories and Applications Chaohao Yuan Kangfei Zhao Ercan Engin Kuruoglu Liang Wang Tingyang Xu Wenbing Huang Deli Zhao Hong Cheng Yu Rong 57 4 0 23 Feb 2025
The Graph's Apprentice: Teaching an LLM Low Level Knowledge for Circuit Quality Estimation Reza Moravej Saurabh Bodhe Zhanguang Zhang Didier Chetelat Dimitrios Tsaras Yingxue Zhang Hui-Ling Zhen Jianye Hao M. Yuan 60 1 0 17 Feb 2025
Trustworthy GNNs with LLMs: A Systematic Review and Taxonomy Ruizhan Xue Huimin Deng Fang He Maojun Wang Zeyu Zhang 75 1 0 12 Feb 2025
HierPromptLM: A Pure PLM-based Framework for Representation Learning on Heterogeneous Text-rich Networks Qiuyu Zhu Liang Zhang Qianxiong Xu Cheng Long 237 2 0 22 Jan 2025
Disentangling the Complex Multiplexed DIA Spectra in De Novo Peptide Sequencing Zheng Ma Zeping Mao Ruixue Zhang Jiazhen Chen L. Xin Paul Shan A. Ghodsi Ming Li 75 0 0 24 Nov 2024
MEG: Medical Knowledge-Augmented Large Language Models for Question Answering Laura Cabello Carmen Martin-Turrero Uchenna Akujuobi Anders Søgaard Carlos Bobed AI4MH 178 1 0 06 Nov 2024
GraphCLIP: Enhancing Transferability in Graph Foundation Models for Text-Attributed Graphs Yun Zhu Haizhou Shi Xiaotang Wang Yongchao Liu Yaoke Wang Boci Peng Chuntao Hong Siliang Tang VLM 63 8 0 14 Oct 2024
Cell-ontology guided transcriptome foundation model Xinyu Yuan Zhihao Zhan Zuobai Zhang Manqi Zhou Jianan Zhao Boyu Han Yue Li Jian Tang 47 1 0 22 Aug 2024
GOFA: A Generative One-For-All Model for Joint Graph Language Modeling Lecheng Kong Jiarui Feng Hao Liu Chengsong Huang Jiaxin Huang Yixin Chen Muhan Zhang AI4CE 77 8 0 12 Jul 2024
STAGE: Simplified Text-Attributed Graph Embeddings Using Pre-trained LLMs Aaron Zolnai-Lucas Jack Boylan Chris Hokamp Parsa Ghaffari 42 2 0 10 Jul 2024
SE(3)-Hyena Operator for Scalable Equivariant Learning Artem Moskalev Mangal Prakash Rui Liao Tommaso Mansi 54 2 0 01 Jul 2024
Unleashing the Potential of Text-attributed Graphs: Automatic Relation Decomposition via Large Language Models Hyunjin Seo Taewon Kim J. Yang Eunho Yang 47 0 0 28 May 2024
Graph Regularized Encoder Training for Extreme Classification Anshul Mittal Shikhar Mohan Deepak Saini Suchith C. Prabhu Jain jiao ... Manik Varma Sumeet Agarwal Soumen Chakrabarti Purushottam Kar Manik Varma GNN 46 0 0 28 Feb 2024
Feature Re-Embedding: Towards Foundation Model-Level Performance in Computational Pathology Wenhao Tang Fengtao Zhou Shengyue Huang Xiang Zhu Yi Zhang Bo Liu 47 21 0 27 Feb 2024
Can GNN be Good Adapter for LLMs? Xuanwen Huang Kaiqiao Han Yang Yang Dezheng Bao Quanjin Tao Ziwei Chai Qi Zhu AI4CE 28 39 0 20 Feb 2024
Topology-Informed Graph Transformer Yuncheol Choi Sun Woo Park Minho Lee Youngho Woo 36 3 0 03 Feb 2024
Large Language Models as Topological Structure Enhancers for Text-Attributed Graphs Shengyin Sun Yuxiang Ren Chen Ma Xuecang Zhang 118 20 0 24 Nov 2023
A Survey of Graph Meets Large Language Model: Progress and Future Directions Yuhan Li Zhixun Li Peisong Wang Jia Li Xiangguo Sun Hongtao Cheng Jeffrey Xu Yu 48 56 0 21 Nov 2023
GRENADE: Graph-Centric Language Model for Self-Supervised Representation Learning on Text-Attributed Graphs Yichuan Li Kaize Ding Kyumin Lee SSL 30 25 0 23 Oct 2023
Label Deconvolution for Node Representation Learning on Large-scale Attributed Graphs against Learning Bias Zhihao Shi Jie Wang Fanghua Lu Hanzhu Chen Defu Lian Zheng Wang Jieping Ye Feng Wu AI4CE 32 6 0 26 Sep 2023
Harnessing Explanations: LLM-to-LM Interpreter for Enhanced Text-Attributed Graph Representation Learning Xiaoxin He Xavier Bresson T. Laurent Adam Perold Yann LeCun Bryan Hooi 33 73 0 31 May 2023
Patton: Language Model Pretraining on Text-Rich Networks Bowen Jin Wentao Zhang Yu Zhang Yu Meng Xinyang Zhang Qi Zhu Jiawei Han VLM 48 45 0 20 May 2023
IGB: Addressing The Gaps In Labeling, Features, Heterogeneity, and Size of Public Graph Datasets for Deep Learning Research Arpandeep Khatua Vikram Sharma Mailthody Bhagyashree Taleka Tengfei Ma Xiang Song Wen-mei W. Hwu AI4CE 50 38 0 27 Feb 2023
Learning on Large-scale Text-attributed Graphs via Variational Inference Jianan Zhao Meng Qu Chaozhuo Li Hao Yan Qian Liu Rui Li Xing Xie Jian Tang VLM 37 134 0 26 Oct 2022
MPClan: Protocol Suite for Privacy-Conscious Computations Nishat Koti S. Patil A. Patra Ajith Suresh 27 18 0 24 Jun 2022
Attention Mechanism in Neural Networks: Where it Comes and Where it Goes Derya Soydaner 3DV 44 150 0 27 Apr 2022
Surface Vision Transformers: Attention-Based Modelling applied to Cortical Analysis Simon Dahan Abdulah Fawaz Logan Z. J. Williams Chunhui Yang Timothy S. Coalson M. Glasser A. Edwards Daniel Rueckert E. C. Robinson MedIm ViT 40 20 0 30 Mar 2022
TextGNN: Improving Text Encoder via Graph Neural Network in Sponsored Search Jason Zhu Yanling Cui Yuming Liu Hao Sun Xue Li Markus Pelger Tianqi Yan Liangjie Zhang Ruofei Zhang Huasha Zhao AI4CE 72 75 0 15 Jan 2021
Google's Neural Machine Translation System: Bridging the Gap between Human and Machine Translation Yonghui Wu M. Schuster Zhehuai Chen Quoc V. Le Mohammad Norouzi ... Alex Rudnick Oriol Vinyals G. Corrado Macduff Hughes J. Dean AIMat 718 6,750 0 26 Sep 2016