Biomedical Question Answering: A Survey of Approaches and Challenges

10 February 2021

Chuanqi Tan

Xiaozhong Liu

Papers citing "Biomedical Question Answering: A Survey of Approaches and Challenges"

42 / 42 papers shown

Title
Demystifying Large Language Models for Medicine: A Primer Qiao Jin Nicholas Wan Robert Leaman Shubo Tian Zhizheng Wang ... Chunhua Weng Ronald M. Summers Qingyu Chen Yifan Peng Zhiyong Lu LM&MA 45 4 0 24 Oct 2024
A Two-Stage Proactive Dialogue Generator for Efficient Clinical Information Collection Using Large Language Model Xueshen Li Xinlong Hou Nirupama Ravi Ziyi Huang Yu Gan LM&MA 34 0 0 02 Oct 2024
Improving Retrieval-Augmented Generation in Medicine with Iterative Follow-up Questions Guangzhi Xiong Qiao Jin Xiao Wang Minjia Zhang Zhiyong Lu Aidong Zhang RALM 60 24 0 01 Aug 2024
A Question Answering Based Pipeline for Comprehensive Chinese EHR Information Extraction Huaiyuan Ying Sheng Yu MedIm 27 0 0 17 Feb 2024
Progress and Opportunities of Foundation Models in Bioinformatics Qing Li Zhihang Hu Yixuan Wang Lei Li Yimin Fan Irwin King Le Song Yu Li AI4CE 43 9 0 06 Feb 2024
Question answering systems for health professionals at the point of care -- a systematic review Gregory Kell A. Roberts Serge Umansky Linglong Qian Davide Ferrari Frank Soboczenski Byron Wallace Nikhil Patel Iain J. Marshall AI4MH 21 7 0 24 Jan 2024
Large Language Models are In-context Teachers for Knowledge Reasoning Jiachen Zhao Zonghai Yao Zhichao Yang Hong-ye Yu ReLM LRM 32 1 0 12 Nov 2023
A Survey of Large Language Models in Medicine: Progress, Application, and Challenge Hongjian Zhou Fenglin Liu Boyang Gu Xinyu Zou Jinfa Huang ... Yefeng Zheng Lei A. Clifton Zheng Li Fenglin Liu David A. Clifton LM&MA 38 107 0 09 Nov 2023
BioInstruct: Instruction Tuning of Large Language Models for Biomedical Natural Language Processing Hieu Tran Zhichao Yang Zonghai Yao Hong-ye Yu ALM LM&MA 40 23 0 30 Oct 2023
Better to Ask in English: Cross-Lingual Evaluation of Large Language Models for Healthcare Queries Yiqiao Jin Mohit Chandra Gaurav Verma Yibo Hu Munmun De Choudhury Srijan Kumar LM&MA ELM 89 66 0 19 Oct 2023
DORIS-MAE: Scientific Document Retrieval using Multi-level Aspect-based Queries Jianyou Wang Kaicheng Wang Xiaoyue Wang Prudhviraj Naidu Leon Bergen R. Paturi 45 11 0 07 Oct 2023
Generating Explanations in Medical Question-Answering by Expectation Maximization Inference over Evidence Wei Sun Mingxiao Li Damien Sileo Jesse Davis Marie-Francine Moens MedIm 19 0 0 02 Oct 2023
Using Weak Supervision and Data Augmentation in Question Answering Chumki Basu Binyuan Hui Allen McIntosh Wei Wang J. Wullert OOD 52 0 0 28 Sep 2023
HealthFC: Verifying Health Claims with Evidence-Based Medical Fact-Checking Juraj Vladika Phillip Schneider Florian Matthes 24 11 0 15 Sep 2023
Augmenting Black-box LLMs with Medical Textbooks for Biomedical Question Answering Yubo Wang Xueguang Ma Wenhu Chen LM&MA AI4MH 47 9 0 05 Sep 2023
Matching Patients to Clinical Trials with Large Language Models Qiao Jin Zifeng Wang C. Floudas Fangyuan Chen Changlin Gong Dara Bracken-Clarke Elisabetta Xue Yifan Yang Jimeng Sun Zhiyong Lu LM&MA 31 91 0 27 Jul 2023
PubMed and Beyond: Biomedical Literature Search in the Age of Artificial Intelligence Qiao Jin Robert Leaman Zhiyong Lu LM&MA 35 41 0 18 Jul 2023
MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval Qiao Jin Won Kim Qingyu Chen Donald C. Comeau Lana Yeganova John Wilbur Zhiyong Lu LM&MA MedIm 15 100 0 02 Jul 2023
Opportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health Shubo Tian Qiao Jin Lana Yeganova Po-Ting Lai Qingqing Zhu ... Donald C. Comeau R. Islamaj Aadit Kapoor Xin Gao Zhiyong Lu LM&MA MedIm AI4MH 114 210 0 15 Jun 2023
GeneGPT: Augmenting Large Language Models with Domain Tools for Improved Access to Biomedical Information Qiao Jin Yifan Yang Qingyu Chen Zhiyong Lu LM&MA LLMAG 16 146 0 19 Apr 2023
Exploring Partial Knowledge Base Inference in Biomedical Entity Linking Hongyi Yuan Keming Lu Zheng Yuan 21 3 0 18 Mar 2023
RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training Zheng Yuan Qiao Jin Chuanqi Tan Zhengyun Zhao Hongyi Yuan Fei Huang Songfang Huang 52 27 0 01 Mar 2023
Product Question Answering in E-Commerce: A Survey Yang Deng Wenxuan Zhang Qian Yu W. Lam 39 17 0 16 Feb 2023
Large-Scale Knowledge Synthesis and Complex Information Retrieval from Biomedical Documents Shreya Saxena Raj Sangani Siva Prasad Shubham Kumar Mihir Athale Rohan Awhad Vishal Vaddina 11 5 0 14 Feb 2023
A Survey on Medical Document Summarization Raghav Jain Anubhav Jangra S. Saha Adam Jatowt 3DGS MedIm 42 19 0 03 Dec 2022
A Survey on Conversational Search and Applications in Biomedicine Naga Sai Krishna Adatrao Gowtham Reddy Gadireddy Jiho Noh MedIm 8 4 0 28 Nov 2022
SpaceQA: Answering Questions about the Design of Space Missions and Space Craft Concepts Andrés García-Silva Cristian Berrío José Manuél Gómez-Pérez J. Martínez-Heras A. Donati Ilaria Roma 27 6 0 07 Oct 2022
BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model Hongyi Yuan Zheng Yuan Ruyi Gan Jiaxing Zhang Yutao Xie Sheng Yu LM&MA 33 123 0 08 Apr 2022
BIOS: An Algorithmically Generated Biomedical Knowledge Graph Sheng Yu Zheng Yuan Jun Xia Shengxuan Luo Huaiyuan Ying ... Yucong Lin Keming Lu Jing Wang Yutao Xie H. Shum 26 16 0 18 Mar 2022
An Accurate Unsupervised Method for Joint Entity Alignment and Dangling Entity Detection Shengxuan Luo Shengkang Yu 13 17 0 10 Mar 2022
BioADAPT-MRC: Adversarial Learning-based Domain Adaptation Improves Biomedical Machine Reading Comprehension Task Maria Mahbub Sudarshan Srinivasan Edmon Begoli Gregory D. Peterson 21 11 0 26 Feb 2022
Development of an Extractive Clinical Question Answering Dataset with Multi-Answer and Multi-Focus Questions Sungrim Moon Huan He Hongfang Liu Jungwei Fan 13 2 0 07 Jan 2022
Recent Advances in Automated Question Answering In Biomedical Domain K. D. Baksi 28 0 0 10 Nov 2021
UNIQORN: Unified Question Answering over RDF Knowledge Graphs and Natural Language Text Soumajit Pramanik Jesujoba Oluwadara Alabi Rishiraj Saha Roy Gerhard Weikum RALM 40 34 0 19 Aug 2021
COUGH: A Challenge Dataset and Models for COVID-19 FAQ Retrieval Xinliang Frederick Zhang Heming Sun Xiang Yue Simon M. Lin Huan Sun RALM 78 17 0 24 Oct 2020
Knowledge Graph-based Question Answering with Electronic Health Records Junwoo Park Youngwoo Cho Haneol Lee Jaegul Choo Edward Choi 38 33 0 19 Oct 2020
Pretrained Transformers for Text Ranking: BERT and Beyond Jimmy J. Lin Rodrigo Nogueira Andrew Yates VLM 242 611 0 13 Oct 2020
A Survey on Complex Question Answering over Knowledge Base: Recent Advances and Challenges Bin Fu Yunqi Qiu Chengguang Tang Yang Li Haiyang Yu Jian Sun 161 95 0 26 Jul 2020
PubMedQA: A Dataset for Biomedical Research Question Answering Qiao Jin Bhuwan Dhingra Zhengping Liu William W. Cohen Xinghua Lu 243 815 0 13 Sep 2019
Model-Agnostic Meta-Learning for Fast Adaptation of Deep Networks Chelsea Finn Pieter Abbeel Sergey Levine OOD 380 11,700 0 09 Mar 2017
Multimodal Compact Bilinear Pooling for Visual Question Answering and Visual Grounding Akira Fukui Dong Huk Park Daylen Yang Anna Rohrbach Trevor Darrell Marcus Rohrbach 167 1,464 0 06 Jun 2016
Efficient Estimation of Word Representations in Vector Space Tomáš Mikolov Kai Chen G. Corrado J. Dean 3DV 293 31,267 0 16 Jan 2013