Align-gram : Rethinking the Skip-gram Model for Protein Sequence
Analysis

Align-gram : Rethinking the Skip-gram Model for Protein Sequence Analysis

6 December 2020

Md. Shamsuzzoha Bayzid

Papers citing "Align-gram : Rethinking the Skip-gram Model for Protein Sequence Analysis"

14 / 14 papers shown

Title
An Investigation in Optimal Encoding of Protein Primary Sequence for Structure Prediction by Artificial Neural Networks Aaron Hein C. Cole H. Valafar AI4CE 16 3 0 02 Aug 2020
ProtTrans: Towards Cracking the Language of Life's Code Through Self-Supervised Deep Learning and High Performance Computing Ahmed Elnaggar M. Heinzinger Christian Dallago Ghalia Rehawi Yu Wang ... Tamas B. Fehér Christoph Angerer Martin Steinegger D. Bhowmik B. Rost DRL 37 927 0 13 Jul 2020
Evaluating Protein Transfer Learning with TAPE Roshan Rao Nicholas Bhattacharya Neil Thomas Yan Duan Xi Chen John F. Canny Pieter Abbeel Yun S. Song SSL 77 786 0 19 Jun 2019
BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding Jacob Devlin Ming-Wei Chang Kenton Lee Kristina Toutanova VLM SSL SSeg 862 93,936 0 11 Oct 2018
Deep contextualized word representations Matthew E. Peters Mark Neumann Mohit Iyyer Matt Gardner Christopher Clark Kenton Lee Luke Zettlemoyer NAI 93 11,520 0 15 Feb 2018
dna2vec: Consistent vector representations of variable-length k-mers Patrick Ng 42 173 0 23 Jan 2017
Distributed Representations for Biological Sequence Analysis Dhananjay Kimothi Akshay Soni Pravesh Biyani J. Hogan DRL 19 67 0 21 Aug 2016
An Empirical Evaluation of doc2vec with Practical Insights into Document Embedding Generation Jey Han Lau Timothy Baldwin 64 651 0 19 Jul 2016
TensorFlow: A system for large-scale machine learning Martín Abadi P. Barham Jianmin Chen Zhiwen Chen Andy Davis ... Vijay Vasudevan Pete Warden Martin Wicke Yuan Yu Xiaoqiang Zhang GNN AI4CE 317 18,300 0 27 May 2016
Deep Learning in Bioinformatics Seonwoo Min Byunghan Lee Sungroh Yoon AI4CE 3DV 55 1,358 0 21 Mar 2016
ProtVec: A Continuous Distributed Representation of Biological Sequences Ehsaneddin Asgari M. R. Mofrad 35 357 0 17 Mar 2015
word2vec Explained: deriving Mikolov et al.'s negative-sampling word-embedding method Yoav Goldberg Omer Levy SSL 46 1,609 0 15 Feb 2014
Distributed Representations of Words and Phrases and their Compositionality Tomas Mikolov Ilya Sutskever Kai Chen G. Corrado J. Dean NAI OCL 273 33,445 0 16 Oct 2013
Efficient Estimation of Word Representations in Vector Space Tomas Mikolov Kai Chen G. Corrado J. Dean 3DV 524 31,406 0 16 Jan 2013