Pathomic Fusion: An Integrated Framework for Fusing Histopathology and Genomic Features for Cancer Diagnosis and Prognosis

18 December 2019

Richard J. Chen

Ming Y. Lu

Jingwen Wang

Drew F. K. Williamson

Papers citing "Pathomic Fusion: An Integrated Framework for Fusing Histopathology and Genomic Features for Cancer Diagnosis and Prognosis"

37 / 37 papers shown

Title
Any-to-Any Learning in Computational Pathology via Triplet Multimodal Pretraining Qichen Sun Zhengrui Guo Rui Peng Hao Chen Jinzhuo Wang MedIm 11 0 0 19 May 2025
Hadamard product in deep learning: Introduction, Advances and Challenges Grigorios G. Chrysos Yongtao Wu Razvan Pascanu Philip Torr V. Cevher AAML 98 1 0 17 Apr 2025
Weakly Semi-supervised Whole Slide Image Classification by Two-level Cross Consistency Supervision Linhao Qu Shiman Li Xiaoyuan Luo Shaolei Liu Qinhao Guo Manning Wang Zhijian Song 43 0 0 16 Apr 2025
Vision Transformers with Autoencoders and Explainable AI for Cancer Patient Risk Stratification Using Whole Slide Imaging Ahmad Hussein Mukesh Prasad Ali Anaissi Ali Braytee MedIm 30 0 0 07 Apr 2025
Robust Multimodal Survival Prediction with the Latent Differentiation Conditional Variational AutoEncoder Junjie Zhou Jiao Tang Yingli Zuo Peng Wan Daoqiang Zhang Wei Shao 60 1 0 12 Mar 2025
MIRROR: Multi-Modal Pathological Self-Supervised Representation Learning via Modality Alignment and Retention Tianyi Wang Jianan Fan Dingxin Zhang Dongnan Liu Yong-quan Xia Heng Huang Weidong Cai 39 0 0 01 Mar 2025
FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classification Zhengrui Guo Conghao Xiong Jiabo Ma Qichen Sun Lishuang Feng Jinzhuo Wang Hao Chen 238 0 0 22 Nov 2024
CoxKAN: Kolmogorov-Arnold Networks for Interpretable, High-Performance Survival Analysis William Knottenbelt Zeyu Gao Rebecca Wray Woody Zhidong Zhang Jiashuai Liu Mireia Crispin-Ortuzar 42 10 0 06 Sep 2024
IHC Matters: Incorporating IHC analysis to H&E Whole Slide Image Analysis for Improved Cancer Grading via Two-stage Multimodal Bilinear Pooling Fusion Jun Wang Yu Mao Yufei Cui Nan Guan Chun Jason Xue 24 1 0 13 May 2024
FORESEE: Multimodal and Multi-view Representation Learning for Robust Prediction of Cancer Survival Liangrui Pan Yijun Peng Yan Li Yiyi Liang Liwen Xu Qingchun Liang Shaoliang Peng 36 0 0 13 May 2024
Dynamic Graph Representation with Knowledge-aware Attention for Histopathology Whole Slide Image Analysis Jiawen Li Yuxuan Chen Hongbo Chu Qiehe Sun Tian Guan Anjia Han Yonghong He 40 27 0 12 Mar 2024
MOAB: Multi-Modal Outer Arithmetic Block For Fusion Of Histopathological Images And Genetic Data For Brain Tumor Grading Omnia Alwazzan Abbas Khan Ioannis Patras Greg Slabaugh 24 7 0 11 Mar 2024
Artificial Intelligence for Digital and Computational Pathology Andrew H. Song Guillaume Jaume Drew F. K. Williamson Ming Y. Lu Anurag J. Vaidya Tiffany R. Miller Faisal Mahmood AI4CE 30 130 0 13 Dec 2023
Domain Generalization in Computational Pathology: Survey and Guidelines Mostafa Jahanifar M. Raza Kesi Xu T. Vuong R. Jewsbury ... Neda Zamanitajeddin Jin Tae Kwak S. Raza F. Minhas Nasir M. Rajpoot OOD 28 17 0 30 Oct 2023
Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction Kexin Ding Mu Zhou Dimitris N. Metaxas Shaoting Zhang 27 28 0 22 Jul 2023
Rethinking Multiple Instance Learning for Whole Slide Image Classification: A Good Instance Classifier is All You Need Linhao Qu Yingfan Ma Xiao-Zhuo Luo Manning Wang Zhijian Song VLM 34 19 0 05 Jul 2023
Improved Multimodal Fusion for Small Datasets with Auxiliary Supervision G. Holste D. V. D. Wal H. Pinckaers R. Yamashita A. Mitani A. Esteva 26 7 0 01 Apr 2023
Multimodal Data Integration for Oncology in the Era of Deep Neural Networks: A Review Asim Waqas Aakash Tripathi Ravichandran Ramachandran Paul Stewart Ghulam Rasool AI4CE 37 31 0 11 Mar 2023
Structure Embedded Nucleus Classification for Histopathology Images Wei Lou Xiang Wan Guanbin Li X. Lou Chenghang Li Feng Gao Haofeng Li 18 9 0 22 Feb 2023
Case-Base Neural Networks: survival analysis with time-varying, higher-order interactions Jesse Islam M. Turgeon R. Sladek S. Bhatnagar CML 23 0 0 16 Jan 2023
Deep Biological Pathway Informed Pathology-Genomic Multimodal Survival Prediction Lin Qiu Aminollah Khormali Kai Liu 21 9 0 06 Jan 2023
Towards Label-efficient Automatic Diagnosis and Analysis: A Comprehensive Survey of Advanced Deep Learning-based Weakly-supervised, Semi-supervised and Self-supervised Techniques in Histopathological Image Analysis Linhao Qu Siyu Liu Xiaoyu Liu Manning Wang Zhijian Song 28 57 0 18 Aug 2022
Multi stain graph fusion for multimodal integration in pathology Chaitanya Dwivedi Shima Nofallah Maryam Pouryahya Janani Iyer K. Leidal ... T. Watkins A. Billin R. Myers J. Abel A. Behrooz 28 18 0 26 Apr 2022
Contrastive learning-based computational histopathology predict differential expression of cancer driver genes Haojue Huang G. Zhou Xuejun Liu L. Deng Chengju Wu Dachuan Zhang Hui Liu MedIm 41 14 0 25 Apr 2022
Deep Multimodal Guidance for Medical Image Classification Mayur Mallya Ghassan Hamarneh 32 14 0 10 Mar 2022
Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology Richard J. Chen Rahul G. Krishnan MedIm ViT 30 84 0 01 Mar 2022
Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups Lucy Godson Navid Alemi Koohbanani J. Nsengimana G. Cook Emily L. Clarke Darren Treanor D. Bishop J. Newton-Bishop A. Gooya 24 1 0 23 Feb 2022
Graph Convolutional Networks for Multi-modality Medical Imaging: Methods, Architectures, and Clinical Applications Kexin Ding Mu Zhou Zichen Wang Qiao Liu C. Arnold Shaoting Zhang Dimitris N. Metaxas GNN MedIm AI4CE 33 12 0 17 Feb 2022
A Multi-modal Fusion Framework Based on Multi-task Correlation Learning for Cancer Prognosis Prediction Kaiwen Tan Weixian Huang Xiaofeng Liu Jinlong Hu Shoubin Dong 21 42 0 22 Jan 2022
Cooperative learning for multiview analysis D. Ding Shuangning Li B. Narasimhan Robert Tibshirani 6 48 0 23 Dec 2021
Whole Slide Images are 2D Point Clouds: Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks Richard J. Chen Ming Y. Lu Muhammad Shaban Chengkuan Chen Tiffany Y. Chen Drew F. K. Williamson Faisal Mahmood 3DPC MedIm 51 153 0 27 Jul 2021
HistoCartography: A Toolkit for Graph Analytics in Digital Pathology Guillaume Jaume Pushpak Pati Valentin Anklin A. Foncubierta M. Gabrani 35 45 0 21 Jul 2021
A Survey on Graph-Based Deep Learning for Computational Histopathology David Ahmedt-Aristizabal M. Armin Simon Denman Clinton Fookes L. Petersson GNN AI4CE 19 108 0 01 Jul 2021
Quantifying Explainers of Graph Neural Networks in Computational Pathology Guillaume Jaume Pushpak Pati Behzad Bozorgtabar Antonio Foncubierta-Rodríguez Florinda Feroce A. Anniciello T. Rau Jean-Philippe Thiran M. Gabrani O. Goksel FAtt 26 76 0 25 Nov 2020
Federated Learning for Computational Pathology on Gigapixel Whole Slide Images Ming Y. Lu Dehan Kong Jana Lipkova Richard J. Chen Rajendra Singh Drew F. K. Williamson Tiffany Y. Chen Faisal Mahmood FedML MedIm 31 167 0 21 Sep 2020
HACT-Net: A Hierarchical Cell-to-Tissue Graph Neural Network for Histopathological Image Classification Pushpak Pati Guillaume Jaume Lauren Alisha Fernandes A. Foncubierta Florinda Feroce ... G. Botti O. Goksel Jean-Philippe Thiran Maria Frucci M. Gabrani 23 69 0 01 Jul 2020
CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images Yanning Zhou S. Graham Navid Alemi Koohbanani Muhammad Shaban Pheng-Ann Heng Nasir M. Rajpoot MedIm 32 173 0 03 Sep 2019