SECNLP: A Survey of Embeddings in Clinical Natural Language Processing

4 March 2019

Papers citing "SECNLP: A Survey of Embeddings in Clinical Natural Language Processing"

50 / 59 papers shown

Title
TransfoRhythm: A Transformer Architecture Conductive to Blood Pressure Estimation via Solo PPG Signal Capturing Amir Arjomand Amin Boudesh Farnoush Bayatmakou Kenneth B. Kent Arash Mohammadi 111 0 0 15 Apr 2024
Measuring Patient Similarities via a Deep Architecture with Medical Concept Embedding Zihao Zhu Changchang Yin B. Qian Yu Cheng Jishang Wei Fei Wang 58 118 0 09 Feb 2019
Improving Medical Short Text Classification with Semantic Expansion Using Word-Cluster Embedding Ying Shen Qiang Zhang Jin Zhang Jiyue Huang Yuming Lu Kai Lei 31 19 0 05 Dec 2018
Sequence Learning with RNNs for Medical Concept Normalization in User-Generated Texts E. Tutubalina Z. Miftahutdinov Sergey I. Nikolenko Valentin Malykh MedIm 31 83 0 28 Nov 2018
Effective Feature Representation for Clinical Text Concept Extraction Yifeng Tao B. Godefroy Guillaume Genthial Christopher Potts 45 8 0 31 Oct 2018
Clinical Concept Extraction with Contextual Word Embedding Henghui Zhu I. Paschalidis A. Tahmasebi 120 76 0 24 Oct 2018
BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding Jacob Devlin Ming-Wei Chang Kenton Lee Kristina Toutanova VLM SSL SSeg 1.8K 94,891 0 11 Oct 2018
Clinical Text Classification with Rule-based Features and Knowledge-guided Convolutional Neural Networks Liang Yao Chengsheng Mao Yuan Luo 44 151 0 17 Jul 2018
Patient representation learning and interpretable evaluation using clinical notes Madhumita Sushil Simon Suster Kim Luyckx Walter Daelemans SSL 52 48 0 03 Jul 2018
Embedding Transfer for Low-Resource Medical Named Entity Recognition: A Case Study on Patient Mobility Denis R. Newman-Griffis Ayah Zirikly 40 33 0 07 Jun 2018
Medical Concept Embedding with Time-Aware Attention Xiangrui Cai Jinyang Gao K. Ngiam Beng Chin Ooi Ying Zhang Xiaojie Yuan 62 64 0 06 Jun 2018
Classifying medical relations in clinical text via convolutional neural networks Bin He Y. Guan Rui Dai 36 66 0 17 May 2018
Learning Patient Representations from Text Dmitriy Dligach Timothy A. Miller 57 17 0 05 May 2018
Exploiting Task-Oriented Resources to Learn Word Embeddings for Clinical Abbreviation Expansion Yue Liu Tao Ge K. Mathews Heng Ji D. McGuinness 38 56 0 11 Apr 2018
Explainable Prediction of Medical Codes from Clinical Text J. Mullenbach Sarah Wiegreffe J. Duke Jimeng Sun Jacob Eisenstein FAtt 86 572 0 15 Feb 2018
Deep contextualized word representations Matthew E. Peters Mark Neumann Mohit Iyyer Matt Gardner Christopher Clark Kenton Lee Luke Zettlemoyer NAI 214 11,556 0 15 Feb 2018
Classifying medical notes into standard disease codes using Machine Learning A. Karmakar DRL 34 11 0 01 Feb 2018
Multi-Label Learning from Medical Plain Text with Convolutional Residual Models Xinyuan Zhang Ricardo Henao Zhe Gan Yitong Li Lawrence Carin 83 33 0 15 Jan 2018
Convolutional Neural Networks for Medical Diagnosis from Admission Notes Yuan Li Dimitris Konomis Graham Neubig P. Xie C. Cheng Eric Xing 49 16 0 06 Dec 2017
AWE-CM Vectors: Augmenting Word Embeddings with a Clinical Metathesaurus Willie Boag Hassan Kané 36 11 0 05 Dec 2017
An Encoder-Decoder Model for ICD-10 Coding of Death Certificates E. Tutubalina Z. Miftahutdinov 20 6 0 04 Dec 2017
SPINE: SParse Interpretable Neural Embeddings Anant Subramanian Danish Pruthi Harsh Jhamtani Taylor Berg-Kirkpatrick Eduard H. Hovy 37 131 0 23 Nov 2017
Semantic Structure and Interpretability of Word Embeddings Lutfi Kerem Senel Ihsan Utlu Veysel Yücesoy Aykut Koç Tolga Çukur 55 105 0 01 Nov 2017
Multi-Label Classification of Patient Notes a Case Study on ICD Code Assignment Tal Baumel Jumana Nassour-Kassis Raphael Cohen Michael Elhadad Noémie Elhadad 117 200 0 27 Sep 2017
Retrofitting Concept Vector Representations of Medical Concepts to Improve Estimates of Semantic Similarity and Relatedness Zhiguo Yu Byron C. Wallace T. Johnson T. Cohen 51 23 0 21 Sep 2017
Learned in Translation: Contextualized Word Vectors Bryan McCann James Bradbury Caiming Xiong R. Socher 121 909 0 01 Aug 2017
Rotations and Interpretability of Word Embeddings: the Case of the Russian Language Alexey Zobnin 35 11 0 14 Jul 2017
Recurrent neural networks with specialized word embeddings for health-domain named-entity recognition Inigo Jauregi Unanue E. Z. Borzeshi Massimo Piccardi 59 118 0 29 Jun 2017
Deep EHR: A Survey of Recent Advances in Deep Learning Techniques for Electronic Health Record (EHR) Analysis B. Shickel P. Tighe A. Bihorac Parisa Rashidi BDL 91 1,117 0 12 Jun 2017
Effective Representations of Clinical Notes Sébastien Dubois Nathanael Romano David C. Kale N. Shah Kenneth Jung 47 23 0 19 May 2017
NeuroNER: an easy-to-use program for named-entity recognition based on neural networks Franck Dernoncourt Ji Young Lee Peter Szolovits 59 190 0 16 May 2017
Semi-supervised sequence tagging with bidirectional language models Matthew E. Peters Bridger Waleed Ammar Chandra Bhagavatula Russell Power 84 635 0 29 Apr 2017
Medical Text Classification using Convolutional Neural Networks Mark Hughes Irene Li S. Kotoulas Toyotaro Suzumura MedIm 52 201 0 22 Apr 2017
Exploiting Convolutional Neural Network for Risk Prediction with Medical Feature Embedding Zhengping Che Yu Cheng Zhaonan Sun Yan Liu 53 58 0 25 Jan 2017
GRAM: Graph-based Attention Model for Healthcare Representation Learning Edward Choi M. T. Bahadori Le Song Walter F. Stewart Jimeng Sun GNN 97 677 0 21 Nov 2016
Feature-Augmented Neural Networks for Patient Note De-identification Ji Young Lee Franck Dernoncourt Özlem Uzuner Peter Szolovits OOD 31 26 0 30 Oct 2016
Bidirectional LSTM-CRF for Clinical Concept Extraction Raghavendra Chalapathy E. Z. Borzeshi Massimo Piccardi 59 93 0 19 Oct 2016
An Investigation of Recurrent Neural Architectures for Drug Name Recognition Raghavendra Chalapathy E. Z. Borzeshi Massimo Piccardi 76 39 0 24 Sep 2016
Structured prediction models for RNN based sequence labeling in clinical text Abhyuday N. Jagannatha Hong-ye Yu 72 199 0 01 Aug 2016
Deepr: A Convolutional Net for Medical Records Phuoc Nguyen T. Tran N. Wickramasinghe Svetha Venkatesh MedIm 58 373 0 26 Jul 2016
Man is to Computer Programmer as Woman is to Homemaker? Debiasing Word Embeddings Tolga Bolukbasi Kai-Wei Chang James Zou Venkatesh Saligrama Adam Kalai CVBM FaML 110 3,139 0 21 Jul 2016
Enriching Word Vectors with Subword Information Piotr Bojanowski Edouard Grave Armand Joulin Tomas Mikolov NAI SSL VLM 229 9,972 0 15 Jul 2016
Bag of Tricks for Efficient Text Classification Armand Joulin Edouard Grave Piotr Bojanowski Tomas Mikolov VLM 175 4,622 0 06 Jul 2016
Bidirectional Recurrent Neural Networks for Medical Event Detection in Electronic Health Records Abhyuday N. Jagannatha Hong-ye Yu BDL 36 279 0 25 Jun 2016
De-identification of Patient Notes with Recurrent Neural Networks Franck Dernoncourt Ji Young Lee Özlem Uzuner Peter Szolovits OOD 59 377 0 10 Jun 2016
Problems With Evaluation of Word Embeddings Using Word Similarity Tasks Manaal Faruqui Yulia Tsvetkov Pushpendre Rastogi Chris Dyer 64 280 0 08 May 2016
End-to-end Sequence Labeling via Bi-directional LSTM-CNNs-CRF Xuezhe Ma Eduard H. Hovy 92 2,654 0 04 Mar 2016
Multi-layer Representation Learning for Medical Concepts Edward Choi M. T. Bahadori Elizabeth Searles Catherine Coffey Jimeng Sun SSL AI4TS 51 506 0 17 Feb 2016
Medical Concept Representation Learning from Electronic Health Records and its Application on Heart Failure Prediction Edward Choi A. Schuetz Walter F. Stewart Jimeng Sun 61 138 0 11 Feb 2016
Linear Algebraic Structure of Word Senses, with Applications to Polysemy Sanjeev Arora Yuanzhi Li Yingyu Liang Tengyu Ma Andrej Risteski 80 282 0 14 Jan 2016