DeepNAT: Deep Convolutional Neural Network for Segmenting Neuroanatomy

27 February 2017

Papers citing "DeepNAT: Deep Convolutional Neural Network for Segmenting Neuroanatomy"

50 / 78 papers shown

Title
Explaining the Success of Nearest Neighbor Methods in Prediction George H. Chen Devavrat Shah OOD 53 145 0 21 Feb 2025
AI for the prediction of early stages of Alzheimer's disease from neuroimaging biomarkers -- A narrative review of a growing field Thorsten Rudroff O. Rainio R. Klén 36 8 0 25 Jun 2024
Label merge-and-split: A graph-colouring approach for memory-efficient brain parcellation A. Kujawa R. Dorent Sebastien Ourselin Tom Kamiel Magda Vercauteren VLM 23 0 0 16 Apr 2024
Neural deformation fields for template-based reconstruction of cortical surfaces from MRI Fabian Bongratz Anne-Marie Rickmann Christian Wachinger 27 11 0 23 Jan 2024
DeepThalamus: A novel deep learning method for automatic segmentation of brain thalamic nuclei from multimodal ultra-high resolution MRI Marina Ruiz-Perez Sergio Morell-Ortega Marien Gadea Roberto Vivó Hernando Gregorio Rubio F. Aparici-Robles M. Iglesia-Vayá T. Tourdias Pierrick Coupé J. V. Manjón 14 0 0 15 Jan 2024
VINNA for Neonates -- Orientation Independence through Latent Augmentations Leonie Henschel David Kügler Lilla Zöllei Martin Reuter 37 2 0 29 Nov 2023
Enhancing Hierarchical Transformers for Whole Brain Segmentation with Intracranial Measurements Integration Xin Yu Yucheng Tang Qi Yang Ho Hin Lee Shunxing Bao Yuankai Huo Bennett A. Landman 14 1 0 08 Sep 2023
Domain-agnostic segmentation of thalamic nuclei from joint structural and diffusion MRI Henry F. J. Tregidgo Sonja Soskic Mark Olchanyi Juri Althonayan Benjamin Billot ... A. Yendiki Daniel C. Alexander Martina Bocchetta J. Rohrer Juan Eugenio Iglesias MedIm 14 4 0 05 May 2023
Neuralizer: General Neuroimage Analysis without Re-Training Steffen Czolbe H. Dickinson OOD 38 12 0 04 May 2023
Automated computed tomography and magnetic resonance imaging segmentation using deep learning: a beginner's guide Diedre Carmo G. Pinheiro Lívia Rodrigues Thays Abreu R. Lotufo Letícia Rittner OOD 40 4 0 12 Apr 2023
Fighting the scanner effect in brain MRI segmentation with a progressive level-of-detail network trained on multi-site data M. Svanera Mattia Savardi A. Signoroni Sergio Benini L. Muckli 19 3 0 04 Nov 2022
FAST-AID Brain: Fast and Accurate Segmentation Tool using Artificial Intelligence Developed for Brain Mostafa Mehdipour-Ghazi Mads Nielsen OOD 22 11 0 30 Aug 2022
Suggestive Annotation of Brain MR Images with Gradient-guided Sampling Chengliang Dai Shuo Wang Yuanhan Mo Elsa D. Angelini Yike Guo Wenjia Bai DiffM MedIm 17 10 0 02 Jun 2022
FastSurferVINN: Building Resolution-Independence into Deep Learning Segmentation Methods -- A Solution for HighRes Brain MRI Leonie Henschel David Kügler M. Reuter 30 41 0 17 Dec 2021
Why Calibration Error is Wrong Given Model Uncertainty: Using Posterior Predictive Checks with Deep Learning Achintya Gopal UQCV 28 1 0 02 Dec 2021
Factorisation-based Image Labelling Yu-ji Yan Yael Balbastre Mikael Brudfors John Ashburner MedIm DiffM 6 6 0 19 Nov 2021
Whole Brain Segmentation with Full Volume Neural Network Yeshu Li Jianwei Cui Yilun Sheng Xiao Liang Jingdong Wang E. Chang Yan Xu 29 11 0 29 Oct 2021
Challenges for machine learning in clinical translation of big data imaging studies Nicola K. Dinsdale Emma Bluemke V. Sundaresan M. Jenkinson Stephen Smith Ana I. L. Namburete AI4CE 32 41 0 07 Jul 2021
Longitudinal Quantitative Assessment of COVID-19 Infection Progression from Chest CTs S. T. Kim Leili Goli Magdalini Paschali Ashkan Khakzar Matthias Keicher Tobias Czempiel E. Burian R. Braren Nassir Navab T. Wendler 11 7 0 12 Mar 2021
A survey on shape-constraint deep learning for medical image segmentation Simon Bohlender Ilkay Oksuz Anirban Mukhopadhyay 3DV 21 34 0 19 Jan 2021
End-to-end Prostate Cancer Detection in bpMRI via 3D CNNs: Effects of Attention Mechanisms, Clinical Priori and Decoupled False Positive Reduction A. Saha M. Hosseinzadeh Henkjan Huisman MedIm 40 129 0 08 Jan 2021
Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast Juan Eugenio Iglesias Benjamin Billot Yael Balbastre A. Tabari J. Conklin Daniel C. Alexander Polina Golland B. Edlow Bruce Fischl 42 100 0 24 Dec 2020
Encoding Clinical Priori in 3D Convolutional Neural Networks for Prostate Cancer Detection in bpMRI A. Saha M. Hosseinzadeh Henkjan Huisman MedIm 11 8 0 31 Oct 2020
Does anatomical contextual information improve 3D U-Net based brain tumor segmentation? Iulian Emil Tampu Neda Haj-Hosseini Anders Eklund 38 9 0 26 Oct 2020
Influence of segmentation accuracy in structural MR head scans on electric field computation for TMS and tES E. Rashed J. Gómez-Tames A. Hirata 13 10 0 25 Sep 2020
Multi-modal segmentation of 3D brain scans using neural networks Jonathan Zopes Moritz Platscher S. Paganucci C. Federau 13 11 0 11 Aug 2020
Automated Claustrum Segmentation in Human Brain MRI Using Deep Learning Hongwei Bran Li A. Menegaux B. Schmitz-Koep Antonia Neubauer Felix J. B. Bäuerlein Suprosanna Shit C. Sorg Bjoern H. Menze D. Hedderich 19 20 0 08 Aug 2020
A review of deep learning in medical imaging: Imaging traits, technology trends, case studies with progress highlights, and future promises S. Kevin Zhou H. Greenspan Christos Davatzikos James S. Duncan Bram van Ginneken A. Madabhushi Jerry L. Prince Daniel Rueckert Ronald M. Summers 43 624 0 02 Aug 2020
Post-DAE: Anatomically Plausible Segmentation via Post-Processing with Denoising Autoencoders Agostina J. Larrazabal Cesar E. Martínez Ben Glocker Enzo Ferrante 24 65 0 24 Jun 2020
Bayesian convolutional neural network based MRI brain extraction on nonhuman primates Gengyan Zhao Fang Liu J. Oler M. Meyerand N. Kalin R. Birn 20 63 0 18 May 2020
Spatio-temporal Learning from Longitudinal Data for Multiple Sclerosis Lesion Segmentation Stefan Denner Ashkan Khakzar Moiz Sajid Mahdi Saleh Žiga Špiclin S. T. Kim Nassir Navab 13 20 0 07 Apr 2020
Crossover-Net: Leveraging the Vertical-Horizontal Crossover Relation for Robust Segmentation Qian Yu Yinghuan Shi Yefeng Zheng Yang Gao Jianbing Zhu Yakang Dai MedIm 11 0 0 03 Apr 2020
A Survey of Deep Learning for Scientific Discovery M. Raghu Erica Schmidt OOD AI4CE 38 120 0 26 Mar 2020
Recalibrating 3D ConvNets with Project & Excite Anne-Marie Rickmann Abhijit Guha Roy Ignacio Sarasua Christian Wachinger 3DPC 21 17 0 25 Feb 2020
Development of accurate human head models for personalized electromagnetic dosimetry using deep learning E. Rashed J. Gómez-Tames A. Hirata MedIm 4 26 0 21 Feb 2020
ACEnet: Anatomical Context-Encoding Network for Neuroanatomy Segmentation Yuemeng Li Hongming Li Yong-Xian Fan 3DPC 27 27 0 13 Feb 2020
End-to-end semantic segmentation of personalized deep brain structures for non-invasive brain stimulation E. Rashed J. Gómez-Tames A. Hirata 11 26 0 13 Feb 2020
Hippocampus Segmentation on Epilepsy and Alzheimer's Disease Studies with Multiple Convolutional Neural Networks Diedre Carmo Bruna Silva C. Yasuda Letícia Rittner R. Lotufo 17 45 0 14 Jan 2020
Learnable Pooling in Graph Convolution Networks for Brain Surface Analysis Karthik Gopinath Christian Desrosiers H. Lombaert 17 25 0 22 Nov 2019
AssemblyNet: A large ensemble of CNNs for 3D Whole Brain MRI Segmentation Pierrick Coupé Boris Mansencal Michael Clement Rémi Giraud B. D. D. Senneville T. Thong Vincent Lepetit J. V. Manjón 22 109 0 20 Nov 2019
DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation Aakash Kaku Chaitra V. Hegde Jeffrey R. Huang Sohae Chung X. Wang Matthew Young A. Radmanesh Yvonne W. Lui N. Razavian 8 20 0 13 Nov 2019
ErrorNet: Learning error representations from limited data to improve vascular segmentation Nima Tajbakhsh B. Lai Shilpa P. Ananth Xiaowei Ding MedIm 26 16 0 10 Oct 2019
FastSurfer -- A fast and accurate deep learning based neuroimaging pipeline Leonie Henschel Sailesh Conjeti Santiago Estrada K. Diers Bruce Fischl M. Reuter MedIm 28 384 0 09 Oct 2019
An Investigation of Quantum Deep Clustering Framework with Quantum Deep SVM & Convolutional Neural Network Feature Extractor Arit Kumar Bishwas Ashish Mani Vasile Palade 19 1 0 21 Sep 2019
CEREBRUM: a fast and fully-volumetric Convolutional Encoder-decodeR for weakly-supervised sEgmentation of BRain strUctures from out-of-the-scanner MRI Dennis Bontempi Sergio Benini A. Signoroni M. Svanera L. Muckli 3DV 11 27 0 11 Sep 2019
Embracing Imperfect Datasets: A Review of Deep Learning Solutions for Medical Image Segmentation Nima Tajbakhsh Laura Jeyaseelan Q. Li J. Chiang Zhihao Wu Xiaowei Ding 16 750 0 27 Aug 2019
Bayesian Generative Models for Knowledge Transfer in MRI Semantic Segmentation Problems Anna Kuzina Evgenii Egorov Evgeny Burnaev MedIm 23 19 0 15 Aug 2019
FD-FCN: 3D Fully Dense and Fully Convolutional Network for Semantic Segmentation of Brain Anatomy Binbin Yang Weiwei Zhang MedIm 3DV 11 8 0 22 Jul 2019
AssemblyNet: A Novel Deep Decision-Making Process for Whole Brain MRI Segmentation Pierrick Coupé Boris Mansencal Michael Clement Rémi Giraud B. D. D. Senneville T. Thong Vincent Lepetit J. V. Manjón 17 17 0 05 Jun 2019
Segmentation of MRI head anatomy using deep volumetric networks and multiple spatial priors Lukas Hirsch Yu Huang Lucas C. Parra MedIm 17 7 0 24 May 2019