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A Survey on Deep Learning in Medical Image Analysis

19 February 2017

Bram van Ginneken

Papers citing "A Survey on Deep Learning in Medical Image Analysis"

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Title
Combo Loss: Handling Input and Output Imbalance in Multi-Organ Segmentation Saeid Asgari Taghanaki Yefeng Zheng S. Kevin Zhou Bogdan Georgescu Puneet Sharma Daguang Xu Dorin Comaniciu Ghassan Hamarneh 101 340 0 08 May 2018
Unsupervised learning for concept detection in medical images: a comparative analysis Eduardo Pinho C. Costa SSL 38 12 0 04 May 2018
Hybrid Forests for Left Ventricle Segmentation using only the first slice label Ismaël Koné L. Boulmane 32 2 0 30 Apr 2018
PANDA: Facilitating Usable AI Development Jinyang Gao Wei Wang Meihui Zhang Gang Chen H. V. Jagadish Guoliang Li Teck Khim Ng Beng Chin Ooi Sheng Wang Jingren Zhou 75 4 0 26 Apr 2018
Automated Mouse Organ Segmentation: A Deep Learning Based Solution N. Ashish M. Brusniak 67 2 0 24 Apr 2018
One-Shot Learning using Mixture of Variational Autoencoders: a Generalization Learning approach Decebal Constantin Mocanu Elena Mocanu BDL VLM DRL 62 18 0 18 Apr 2018
Not-so-supervised: a survey of semi-supervised, multi-instance, and transfer learning in medical image analysis Veronika Cheplygina Marleen de Bruijne J. Pluim 88 761 0 17 Apr 2018
Attention-Gated Networks for Improving Ultrasound Scan Plane Detection Jo Schlemper Ozan Oktay Liang Chen Jacqueline Matthew C. Knight Bernhard Kainz Ben Glocker Daniel Rueckert 89 93 0 15 Apr 2018
$All-Optical Machine Learning Using Diffractive Deep Neural Networks$ All-Optical Machine Learning Using Diffractive Deep Neural Networks Xing Lin Y. Rivenson N. Yardimci Muhammed Veli Mona Jarrahi Aydogan Ozcan 148 1,687 0 14 Apr 2018
Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver standard Masks Oeslle Lucena R. Souza Letícia Rittner Richard Frayne R. Lotufo 35 3 0 13 Apr 2018
Iterative fully convolutional neural networks for automatic vertebra segmentation and identification Nikolas Lessmann Bram van Ginneken P. A. Jong Ivana Išgum 65 217 0 12 Apr 2018
A Recurrent CNN for Automatic Detection and Classification of Coronary Artery Plaque and Stenosis in Coronary CT Angiography M. Zreik R. V. van Hamersvelt J. Wolterink T. Leiner M. Viergever Ivana Isgum 93 222 0 12 Apr 2018
Plaque Classification in Coronary Arteries from IVOCT Images Using Convolutional Neural Networks and Transfer Learning N. Gessert Markus Heyder S. Latus Matthias Lutz Alexander Schlaefer 29 13 0 11 Apr 2018
Impact of ultrasound image reconstruction method on breast lesion classification with neural transfer learning Michal Byra T. Sznajder Danijel Koržinek H. Piotrzkowska-Wróblewska K. Dobruch-Sobczak A. Nowicki K. Marasek 54 9 0 06 Apr 2018
Towards radiologist-level cancer risk assessment in CT lung screening using deep learning S. Trajanovski Dimitrios Mavroeidis C. Swisher B. Gebre Bastiaan S. Veeling ... C. Wald Brady J. McKee Sebastian Flacke H. MacMahon H. Pien 49 51 0 05 Apr 2018
Semi-Supervised Deep Metrics for Image Registration A. Sedghi Jie Luo Alireza Mehrtash S. Pieper C. Tempany Tina Kapur P. Mousavi W. Wells 61 20 0 04 Apr 2018
Towards whole-body CT Bone Segmentation André Klein J. Warszawski J. Hillengass Klaus H. Maier-Hein 37 9 0 03 Apr 2018
Multi-modal Disease Classification in Incomplete Datasets Using Geometric Matrix Completion G. Vivar A. Zwergal Nassir Navab Seyed-Ahmad Ahmadi 65 23 0 30 Mar 2018
Classification of crystallization outcomes using deep convolutional neural networks Andrew E. Bruno P. Charbonneau J. Newman E. Snell David R. So Vincent Vanhoucke Christopher J. Watkins Shawn Williams Julie Wilson 62 68 0 27 Mar 2018
Multiple Sclerosis Lesion Segmentation from Brain MRI via Fully Convolutional Neural Networks Snehashis Roy J. Butman Daniel Reich P. Calabresi Dzung L. Pham MedIm 50 86 0 24 Mar 2018
Real-time Deep Pose Estimation with Geodesic Loss for Image-to-Template Rigid Registration Seyed Sadegh Mohseni Salehi Shadab Khan Deniz Erdogmus Ali Gholipour 3DH MedIm 69 107 0 15 Mar 2018
Computer-aided diagnosis of lung carcinoma using deep learning - a pilot study Zhang Li Zheyu Hu Jiaolong Xu T. Tan Hui Chen ... G. Cai Q. Ouyang Yuling Tang G. Litjens Qiang Li 51 31 0 14 Mar 2018
Development and Validation of Deep Learning Algorithms for Detection of Critical Findings in Head CT Scans Sasank Chilamkurthy Rohit Ghosh Swetha Tanamala Mustafa Biviji N. Campeau V. Venugopal V. Mahajan Pooja Rao Prashant Warier 55 108 0 13 Mar 2018
Replication study: Development and validation of deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs M. Voets Kajsa Møllersen L. A. Bongo 77 177 0 12 Mar 2018
A Deep Learning Approach for Pose Estimation from Volumetric OCT Data N. Gessert M. Schlüter Alexander Schlaefer 50 30 0 10 Mar 2018
Efficient and Accurate MRI Super-Resolution using a Generative Adversarial Network and 3D Multi-Level Densely Connected Network Yuhua Chen Feng Shi A. Christodoulou Zhengwei Zhou Yibin Xie Debiao Li MedIm 85 309 0 04 Mar 2018
GAN-based Synthetic Medical Image Augmentation for increased CNN Performance in Liver Lesion Classification Maayan Frid-Adar I. Diamant Eyal Klang Michal Amitai Jacob Goldberger H. Greenspan GAN MedIm 92 1,574 0 03 Mar 2018
The History Began from AlexNet: A Comprehensive Survey on Deep Learning Approaches Md. Zahangir Alom T. Taha C. Yakopcic Stefan Westberg P. Sidike Mst Shamima Nasrin B. Van Essen A. Awwal V. Asari VLM 133 883 0 03 Mar 2018
Bioinformatics and Medicine in the Era of Deep Learning D. Bacciu P. Lisboa José D. Martín R. Stoean A. Vellido AI4CE BDL 64 17 0 27 Feb 2018
i3PosNet: Instrument Pose Estimation from X-Ray in temporal bone surgery David Kügler Jannik Sehring A. Stefanov I. Stenin J. Kristin T. Klenzner J. Schipper Anirban Mukhopadhyay 78 35 0 26 Feb 2018
Recurrent Residual Convolutional Neural Network based on U-Net (R2U-Net) for Medical Image Segmentation Md. Zahangir Alom Mahmudul Hasan C. Yakopcic T. Taha V. Asari SSeg 135 1,022 0 20 Feb 2018
Bridging Cognitive Programs and Machine Learning Amir Rosenfeld John K. Tsotsos HAI 61 1 0 16 Feb 2018
Attention-based Deep Multiple Instance Learning Maximilian Ilse Jakub M. Tomczak Max Welling 215 1,845 0 13 Feb 2018
Tubule segmentation of fluorescence microscopy images based on convolutional neural networks with inhomogeneity correction Soonam Lee Chichen Fu P. Salama K. Dunn Edward J. Delp 31 13 0 10 Feb 2018
Deep learning in radiology: an overview of the concepts and a survey of the state of the art Maciej A. Mazurowski Mateusz Buda Ashirbani Saha Mustafa R. Bashir MedIm AI4CE 62 443 0 10 Feb 2018
Multiparametric Deep Learning Tissue Signatures for a Radiological Biomarker of Breast Cancer: Preliminary Results V. Parekh K. Macura S. Harvey I. Kamel R. Khouli D. Bluemke M. Jacobs MedIm 50 35 0 10 Feb 2018
Effective Quantization Approaches for Recurrent Neural Networks Md. Zahangir Alom A. Moody N. Maruyama B. Van Essen T. Taha MQ 55 36 0 07 Feb 2018
Active, Continual Fine Tuning of Convolutional Neural Networks for Reducing Annotation Efforts Zongwei Zhou Jae Y. Shin S. Gurudu Michael B. Gotway Jianming Liang MedIm 109 10 0 03 Feb 2018
Classification and Disease Localization in Histopathology Using Only Global Labels: A Weakly-Supervised Approach P. Courtiol Eric W. Tramel Marc Sanselme G. Wainrib 99 118 0 01 Feb 2018
Diagnose like a Radiologist: Attention Guided Convolutional Neural Network for Thorax Disease Classification Q. Guan Yaping Huang Zhun Zhong Zhedong Zheng Liang Zheng Yi Yang 75 260 0 30 Jan 2018
Deep Learning in Pharmacogenomics: From Gene Regulation to Patient Stratification Alexandr A Kalinin Gerald A. Higgins Narathip Reamaroon S. M. Reza Soroushmehr Ari Allyn-Feuer I. Dinov Kayvan Najarian B. Athey OOD 133 127 0 25 Jan 2018
Automatic construction of Chinese herbal prescription from tongue image via CNNs and auxiliary latent therapy topics Yang Hu Guihua Wen Huiqiang Liao Changjun Wang Dan Dai Zhiwen Yu LM&MA MedIm 67 43 0 23 Jan 2018
Three Dimensional Fluorescence Microscopy Image Synthesis and Segmentation Chichen Fu Soonam Lee D. J. Ho Shuo Han P. Salama K. Dunn Edward J. Delp 3DV MedIm 63 64 0 22 Jan 2018
Quantitative analysis of patch-based fully convolutional neural networks for tissue segmentation on brain magnetic resonance imaging J. Bernal Kaisar Kushibar Mariano Cabezas Sergi Valverde A. Oliver Xavier Llado 3DV 48 38 0 19 Jan 2018
Student Beats the Teacher: Deep Neural Networks for Lateral Ventricles Segmentation in Brain MR Mohsen Ghafoorian Jonas Teuwen R. Manniesing F.‐E. Leeuw Bram van Ginneken N. Karssemeijer B. Platel 81 17 0 15 Jan 2018
Deep convolutional neural networks for segmenting 3D in vivo multiphoton images of vasculature in Alzheimer disease mouse models Mohammad Haft-Javaherian Linjing Fang V. Muse C. Schaffer N. Nishimura M. Sabuncu 109 74 0 03 Jan 2018
Dense Pooling layers in Fully Convolutional Network for Skin Lesion Segmentation E. Nasr-Esfahani Shima Rafiee Mohammad Jafari N. Karimi J. Wrobel S. M. Reza Soroushmehr S. Samavi Kayvan Najarian MedIm SSeg 51 16 0 29 Dec 2017
First Draft on the xInf Model for Universal Physical Computation and Reverse Engineering of Natural Intelligence Hongbo Jia AI4CE AILaw 35 0 0 26 Dec 2017
Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network E. Bonmati Yipeng Hu Nikhil Sindhwani H. Dietz Jan D'hooge D. Barratt Jan Deprest Tom Vercauteren 43 31 0 18 Dec 2017
Deep CNN ensembles and suggestive annotations for infant brain MRI segmentation Jose Dolz Christian Desrosiers Li Wang Jing Yuan Dinggang Shen Ismail Ben Ayed 3DV 93 113 0 14 Dec 2017