Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation

5 September 2016

Papers citing "Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation"

31 / 31 papers shown

Title
Geometric Framework for 3D Cell Segmentation Correction Peter Chen Bryan Chang Olivia Annette Creasey Julie Beth Sneddon Yining Liu 36 0 0 03 Feb 2025
The state-of-the-art 3D anisotropic intracranial hemorrhage segmentation on non-contrast head CT: The INSTANCE challenge Xiangyu Li Gongning Luo Kuanquan Wang Hongyu Wang Jun Liu ... Moona Mazher Abdul Qayyum Valeriia Abramova Xavier Llado Shuo Li 47 26 0 09 Jan 2023
Self-Supervised Guided Segmentation Framework for Unsupervised Anomaly Detection Peng-Fei Xing Yanpeng Sun Zechao Li 25 12 0 26 Sep 2022
YOLO2U-Net: Detection-Guided 3D Instance Segmentation for Microscopy A. Ziabari Derek C. Rose A. Shirinifard D. Solecki 15 2 0 13 Jul 2022
A Topology-Attention ConvLSTM Network and Its Application to EM Images Jiaqi Yang Xiaoling Hu Chao Chen Chialing Tsai 3DPC MedIm 17 3 0 07 Feb 2022
Medical Image Segmentation with 3D Convolutional Neural Networks: A Survey S. Niyas S. Pawan Anand Kumar Jeny Rajan MedIm 38 83 0 19 Aug 2021
UNETR: Transformers for 3D Medical Image Segmentation Ali Hatamizadeh Yucheng Tang Vishwesh Nath Dong Yang Andriy Myronenko Bennett Landman H. Roth Daguang Xu ViT MedIm 57 1,533 0 18 Mar 2021
Capturing implicit hierarchical structure in 3D biomedical images with self-supervised hyperbolic representations Joy Hsu Jeffrey Gu Gong-Her Wu Wah Chiu Serena Yeung SSL 28 27 0 03 Dec 2020
DeU-Net: Deformable U-Net for 3D Cardiac MRI Video Segmentation Shunjie Dong Jinlong Zhao Maojun Zhang Zhengxue Shi Jianing Deng Yiyu Shi Mei Tian Cheng Zhuo 20 20 0 13 Jul 2020
A Two-step-training Deep Learning Framework for Real-time Computational Imaging without Physics Priors Ruibo Shang Kevin Hoffer-Hawlik Geoffrey P. Luke 9 14 0 10 Jan 2020
A Model-Driven Stack-Based Fully Convolutional Network for Pancreas Segmentation Hao Li Jun Yu Li Xiaozhu Lin Xiaohua Qian 27 10 0 03 Mar 2019
A New Ensemble Learning Framework for 3D Biomedical Image Segmentation Hao Zheng Yizhe Zhang Lin Yang Peixian Liang Zhuo Zhao Chaoli Wang D. Z. Chen 3DV 28 75 0 10 Dec 2018
Joint Vertebrae Identification and Localization in Spinal CT Images by Combining Short- and Long-Range Contextual Information Haofu Liao A. Mesfin Jiebo Luo 28 85 0 09 Dec 2018
Elastic Boundary Projection for 3D Medical Image Segmentation Tianwei Ni Lingxi Xie Huangjie Zheng Elliot K. Fishman Alan Yuille 16 34 0 03 Dec 2018
Robust neural circuit reconstruction from serial electron microscopy with convolutional recurrent networks Drew Linsley Junkyung Kim D. Berson Thomas Serre 3DV 14 17 0 28 Nov 2018
Multi Modal Convolutional Neural Networks for Brain Tumor Segmentation Mehmet Aygün Y. Sahin Gözde B. Ünal MedIm 13 21 0 17 Sep 2018
Recurrent neural networks for aortic image sequence segmentation with sparse annotations Wenjia Bai Hideaki Suzuki C. Qin G. Tarroni Ozan Oktay Paul M. Matthews Daniel Rueckert MedIm 18 112 0 01 Aug 2018
BoxNet: Deep Learning Based Biomedical Image Segmentation Using Boxes Only Annotation L. Yang Yizhe Zhang Zhuo Zhao Hao Zheng Peixian Liang M. Ying A. Ahuja D. Z. Chen 21 31 0 02 Jun 2018
Microscopy Cell Segmentation via Convolutional LSTM Networks Assaf Arbelle Tammy Riklin-Raviv 42 73 0 29 May 2018
A Segmentation-aware Deep Fusion Network for Compressed Sensing MRI Zhiwen Fan Liyan Sun Xinghao Ding Yue Huang C. Cai John Paisley MedIm 27 27 0 04 Apr 2018
Fully Convolutional Network Ensembles for White Matter Hyperintensities Segmentation in MR Images Hongwei Bran Li Gongfa Jiang Jianguo Zhang Ruixuan Wang Zhaolei Wang Weishi Zheng Bjoern H. Menze 14 193 0 14 Feb 2018
A New Registration Approach for Dynamic Analysis of Calcium Signals in Organs Peixian Liang Jianxu Chen Pavel A. Brodskiy Qinfeng Wu Yejia Zhang Yizhe Zhang L. Yang J. Zartman D. Z. Chen 78 6 0 01 Feb 2018
Learning to Segment Moving Objects P. Tokmakov Cordelia Schmid Alahari Karteek VOS 36 97 0 01 Dec 2017
PSIque: Next Sequence Prediction of Satellite Images using a Convolutional Sequence-to-Sequence Network Seungkyun Hong Seongchan Kim M. Joh Sa-kwang Song 27 24 0 29 Nov 2017
Improving Deep Pancreas Segmentation in CT and MRI Images via Recurrent Neural Contextual Learning and Direct Loss Function Jinzheng Cai Le Lu Yuanpu Xie Fuyong Xing L. Yang MedIm SSeg 35 132 0 16 Jul 2017
Extracting 3D Vascular Structures from Microscopy Images using Convolutional Recurrent Networks Russell Bates B. Irving B. Markelc Jakob Kaeppler R. Muschel Vicente Grau J. Schnabel MedIm 14 20 0 26 May 2017
Multi-stage Multi-recursive-input Fully Convolutional Networks for Neuronal Boundary Detection Wei Shen Bin Wang Yuan Jiang Yan Wang Alan Yuille 6 62 0 24 Mar 2017
A Survey on Deep Learning in Medical Image Analysis G. Litjens Thijs Kooi B. Bejnordi A. Setio F. Ciompi Mohsen Ghafoorian Jeroen van der Laak Bram van Ginneken C. I. Sánchez OOD 286 10,613 0 19 Feb 2017
A Fixed-Point Model for Pancreas Segmentation in Abdominal CT Scans Yuyin Zhou Lingxi Xie Wei Shen Yan Wang Elliot K. Fishman Alan Yuille MedIm 30 36 0 25 Dec 2016
Automatic Lymphocyte Detection in H&E Images with Deep Neural Networks Jianxu Chen C. Srinivas 34 31 0 09 Dec 2016
Convolutional LSTM Network: A Machine Learning Approach for Precipitation Nowcasting Xingjian Shi Zhourong Chen Hao Wang Dit-Yan Yeung W. Wong W. Woo 230 7,903 0 13 Jun 2015