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The Importance of Skip Connections in Biomedical Image Segmentation

The Importance of Skip Connections in Biomedical Image Segmentation

14 August 2016
M. Drozdzal
Eugene Vorontsov
Gabriel Chartrand
Samuel Kadoury
C. Pal
    MedIm
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Papers citing "The Importance of Skip Connections in Biomedical Image Segmentation"

50 / 80 papers shown
Title
GaMNet: A Hybrid Network with Gabor Fusion and NMamba for Efficient 3D Glioma Segmentation
GaMNet: A Hybrid Network with Gabor Fusion and NMamba for Efficient 3D Glioma Segmentation
Chengwei Ye
Hongzhi Zhang
Yufei Lin
Kangsheng Wang
Linuo Xu
Shuyan Liu
MedIm
144
0
0
08 May 2025
MediSee: Reasoning-based Pixel-level Perception in Medical Images
MediSee: Reasoning-based Pixel-level Perception in Medical Images
Qinyue Tong
Ziqian Lu
Jun Liu
Yangming Zheng
Zheming Lu
LRM
23
0
0
15 Apr 2025
Leveraging Anatomical Priors for Automated Pancreas Segmentation on Abdominal CT
Leveraging Anatomical Priors for Automated Pancreas Segmentation on Abdominal CT
Anisa V. Prasad
T. Mathai
P. Mukherjee
Jianfei Liu
Ronald M. Summers
SSeg
49
1
0
09 Apr 2025
Longitudinal Assessment of Lung Lesion Burden in CT
Longitudinal Assessment of Lung Lesion Burden in CT
T. Mathai
Benjamin Hou
Ronald M. Summers
29
0
0
09 Apr 2025
U-Nets as Belief Propagation: Efficient Classification, Denoising, and
  Diffusion in Generative Hierarchical Models
U-Nets as Belief Propagation: Efficient Classification, Denoising, and Diffusion in Generative Hierarchical Models
Song Mei
3DV
AI4CE
DiffM
41
11
0
29 Apr 2024
Deep Learning for Vascular Segmentation and Applications in Phase
  Contrast Tomography Imaging
Deep Learning for Vascular Segmentation and Applications in Phase Contrast Tomography Imaging
Ekin Yagis
S. Aslani
Yashvardhan Jain
Yang Zhou
Shahrokh Rahmani
...
M. Ackermann
D. Jonigk
Paul Tafforeau
Peter D Lee
Claire L. Walsh
37
4
0
22 Nov 2023
Multi-level Asymmetric Contrastive Learning for Volumetric Medical Image Segmentation Pre-training
Multi-level Asymmetric Contrastive Learning for Volumetric Medical Image Segmentation Pre-training
Shuang Zeng
Lei Zhu
Xinliang Zhang
Qian Chen
Hangzhou He
...
Zhaoheng Xie
Yanye Lu
Qiushi Ren
Zhaoheng Xie
Yanye Lu
27
0
0
21 Sep 2023
Image-level supervision and self-training for transformer-based
  cross-modality tumor segmentation
Image-level supervision and self-training for transformer-based cross-modality tumor segmentation
Malo de Boisredon
Eugene Vorontsov
W. Le
Samuel Kadoury
MedIm
ViT
27
0
0
17 Sep 2023
DLSIA: Deep Learning for Scientific Image Analysis
DLSIA: Deep Learning for Scientific Image Analysis
Eric J. Roberts
Tanny Chavez
Alexander Hexemer
Petrus H. Zwart
AI4CE
14
3
0
02 Aug 2023
Source-Free Domain Adaptive Fundus Image Segmentation with
  Class-Balanced Mean Teacher
Source-Free Domain Adaptive Fundus Image Segmentation with Class-Balanced Mean Teacher
Longxiang Tang
Kai Li
Chunming He
Yulun Zhang
Xiu Li
32
23
0
14 Jul 2023
Effect of Intensity Standardization on Deep Learning for WML
  Segmentation in Multi-Centre FLAIR MRI
Effect of Intensity Standardization on Deep Learning for WML Segmentation in Multi-Centre FLAIR MRI
A. Ghazvanchahi
P. Maralani
A. Moody
A. Khademi
23
1
0
07 Jul 2023
A Deep Active Contour Model for Delineating Glacier Calving Fronts
A Deep Active Contour Model for Delineating Glacier Calving Fronts
Konrad Heidler
Lichao Mou
Erik Loebel
M. Scheinert
Sébastien Lefèvre
Xiao Xiang Zhu
37
7
0
07 Jul 2023
Deep image prior inpainting of ancient frescoes in the Mediterranean
  Alpine arc
Deep image prior inpainting of ancient frescoes in the Mediterranean Alpine arc
Fabio Merizzi
Perrine Saillard
Oceane Acquier
E. Morotti
E. L. Piccolomini
L. Calatroni
Rosa Maria Dessì
AI4CE
21
7
0
25 Jun 2023
Noisy Image Segmentation With Soft-Dice
Noisy Image Segmentation With Soft-Dice
M. Nordström
Henrik Hult
A. Maki
F. Löfman
34
2
0
03 Apr 2023
Futuristic Variations and Analysis in Fundus Images Corresponding to
  Biological Traits
Futuristic Variations and Analysis in Fundus Images Corresponding to Biological Traits
M. Hassan
Hao Zhang
Ahmed Fateh Ameen
Home Wu Zeng
Shuyue Ma
...
Dongmei Wu
Can Zhang
You Zhou
Awiwu Ain
Peiwu Qin
MedIm
21
0
0
08 Feb 2023
Building Height Prediction with Instance Segmentation
Building Height Prediction with Instance Segmentation
F. Bagci
A. Kındıroglu
Metehan Yalçin
Ufuk Uyan
Mahiye Uluyagmur Öztürk
19
2
0
19 Dec 2022
M-GenSeg: Domain Adaptation For Target Modality Tumor Segmentation With
  Annotation-Efficient Supervision
M-GenSeg: Domain Adaptation For Target Modality Tumor Segmentation With Annotation-Efficient Supervision
Malo Alefsen de Boisredon dÁssier
Eugene Vorontsov
Samuel Kadoury
MedIm
30
2
0
14 Dec 2022
Visual-tactile Fusion for Transparent Object Grasping in Complex
  Backgrounds
Visual-tactile Fusion for Transparent Object Grasping in Complex Backgrounds
Shoujie Li
Haixin Yu
Wenbo Ding
Houde Liu
Linqi Ye
Chongkun Xia
Xueqian Wang
Xiao-Ping Zhang
21
26
0
30 Nov 2022
Semantic Segmentation for Fully Automated Macrofouling Analysis on
  Coatings after Field Exposure
Semantic Segmentation for Fully Automated Macrofouling Analysis on Coatings after Field Exposure
Lutz M. K. Krause
Emily Manderfeld
Patricia Gnutt
Louisa Vogler
Ann Wassick
...
Marco Rudolph
K. Hunsucker
G. Swain
Bodo Rosenhahn
A. Rosenhahn
13
5
0
21 Nov 2022
Theoretical analysis and experimental validation of volume bias of soft
  Dice optimized segmentation maps in the context of inherent uncertainty
Theoretical analysis and experimental validation of volume bias of soft Dice optimized segmentation maps in the context of inherent uncertainty
J. Bertels
D. Robben
Dirk Vandermeulen
P. Suetens
24
19
0
08 Nov 2022
PointNeuron: 3D Neuron Reconstruction via Geometry and Topology Learning
  of Point Clouds
PointNeuron: 3D Neuron Reconstruction via Geometry and Topology Learning of Point Clouds
Runkai Zhao
Heng Wang
Chaoyi Zhang
Weidong (Tom) Cai
3DV
18
6
0
15 Oct 2022
A Pathologist-Informed Workflow for Classification of Prostate Glands in
  Histopathology
A Pathologist-Informed Workflow for Classification of Prostate Glands in Histopathology
Alessandro Ferrero
Beatrice S. Knudsen
Deepika Sirohi
Ross T. Whitaker
19
0
0
27 Sep 2022
The Dice loss in the context of missing or empty labels: Introducing
  $Φ$ and $ε$
The Dice loss in the context of missing or empty labels: Introducing ΦΦΦ and εεε
Sofie Tilborghs
J. Bertels
D. Robben
Dirk Vandermeulen
F. Maes
27
5
0
19 Jul 2022
R2U++: A Multiscale Recurrent Residual U-Net with Dense Skip Connections
  for Medical Image Segmentation
R2U++: A Multiscale Recurrent Residual U-Net with Dense Skip Connections for Medical Image Segmentation
Mehreen Mubashar
Hazrat Ali
C. Grönlund
Shoaib Azmat
SSeg
21
66
0
03 Jun 2022
UNet#: A UNet-like Redesigning Skip Connections for Medical Image
  Segmentation
UNet#: A UNet-like Redesigning Skip Connections for Medical Image Segmentation
Ledan Qian
Xiao Zhou
Yi Li
Zhongyi Hu
36
5
0
24 May 2022
k-strip: A novel segmentation algorithm in k-space for the application
  of skull stripping
k-strip: A novel segmentation algorithm in k-space for the application of skull stripping
Moritz Rempe
F. Mentzel
Kelsey L. Pomykala
Johannes Haubold
F. Nensa
K. Kröninger
Jan Egger
Jens Kleesiek
35
8
0
19 May 2022
Ischemic Stroke Lesion Segmentation Using Adversarial Learning
Ischemic Stroke Lesion Segmentation Using Adversarial Learning
Mobarakol Islam
N. R. Vaidyanathan
Jeya Maria Jose Valanarasu
Hongliang Ren
GAN
MedIm
21
15
0
11 Apr 2022
View-Consistent Metal Segmentation in the Projection Domain for Metal
  Artifact Reduction in CBCT -- An Investigation of Potential Improvement
View-Consistent Metal Segmentation in the Projection Domain for Metal Artifact Reduction in CBCT -- An Investigation of Potential Improvement
Tristan M. Gottschalk
Andreas Maier
Florian Kordon
Björn Kreher
24
7
0
03 Dec 2021
SUPER-Net: Trustworthy Medical Image Segmentation with Uncertainty
  Propagation in Encoder-Decoder Networks
SUPER-Net: Trustworthy Medical Image Segmentation with Uncertainty Propagation in Encoder-Decoder Networks
Giuseppina Carannante
Dimah Dera
Nidhal C.Bouaynaya
Hassan M. Fathallah-Shaykh
Ghulam Rasool
UQCV
AAML
OOD
27
6
0
10 Nov 2021
Calibrating the Dice loss to handle neural network overconfidence for
  biomedical image segmentation
Calibrating the Dice loss to handle neural network overconfidence for biomedical image segmentation
Michael Yeung
L. Rundo
Yang Nan
Evis Sala
Carola-Bibiane Schönlieb
Guang Yang
UQCV
25
30
0
31 Oct 2021
UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise
  Perspective with Transformer
UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspective with Transformer
Haonan Wang
Peng Cao
Jiaqi Wang
Osmar R. Zaiane
MedIm
ViT
126
708
0
09 Sep 2021
Dilated Inception U-Net (DIU-Net) for Brain Tumor Segmentation
Dilated Inception U-Net (DIU-Net) for Brain Tumor Segmentation
D. Cahall
Ghulam Rasool
N. Bouaynaya
Hassan M. Fathallah-Shaykh
32
6
0
15 Aug 2021
Sharp U-Net: Depthwise Convolutional Network for Biomedical Image
  Segmentation
Sharp U-Net: Depthwise Convolutional Network for Biomedical Image Segmentation
H. Zunair
A. Ben Hamza
SSeg
MDE
15
224
0
26 Jul 2021
Fully automated quantification of in vivo viscoelasticity of prostate
  zones using magnetic resonance elastography with Dense U-net segmentation
Fully automated quantification of in vivo viscoelasticity of prostate zones using magnetic resonance elastography with Dense U-net segmentation
Nader Aldoj
F. Biavati
M. Dewey
A. Hennemuth
P. Asbach
I. Sack
14
4
0
21 Jun 2021
Recent advances and clinical applications of deep learning in medical
  image analysis
Recent advances and clinical applications of deep learning in medical image analysis
Xuxin Chen
Ximing Wang
Kecheng Zhang
K. Fung
T. Thai
K. Moore
Robert S. Mannel
Hong Liu
B. Zheng
Y. Qiu
OOD
18
570
0
27 May 2021
The Federated Tumor Segmentation (FeTS) Challenge
The Federated Tumor Segmentation (FeTS) Challenge
Sarthak Pati
Ujjwal Baid
M. Zenk
Brandon Edwards
Micah J. Sheller
...
Lena Maier-Hein
Jens Kleesiek
Bjoern H. Menze
Klaus Maier-Hein
Spyridon Bakas
FedML
OOD
41
72
0
12 May 2021
A lightweight deep learning based cloud detection method for Sentinel-2A
  imagery fusing multi-scale spectral and spatial features
A lightweight deep learning based cloud detection method for Sentinel-2A imagery fusing multi-scale spectral and spatial features
Jun Li
Zhaocong Wu
Zhongwen Hu
Canliang Jian
Shaojie Luo
Lichao Mou
Xiaoxiang Zhu
M. Molinier
20
52
0
29 Apr 2021
Focusing on Shadows for Predicting Heightmaps from Single Remotely
  Sensed RGB Images with Deep Learning
Focusing on Shadows for Predicting Heightmaps from Single Remotely Sensed RGB Images with Deep Learning
S. Karatsiolis
A. Kamilaris
30
1
0
22 Apr 2021
MPASNET: Motion Prior-Aware Siamese Network for Unsupervised Deep Crowd
  Segmentation in Video Scenes
MPASNET: Motion Prior-Aware Siamese Network for Unsupervised Deep Crowd Segmentation in Video Scenes
Jinhai Yang
Hua Yang
3DPC
21
0
0
21 Jan 2021
Cutting-edge 3D Medical Image Segmentation Methods in 2020: Are Happy
  Families All Alike?
Cutting-edge 3D Medical Image Segmentation Methods in 2020: Are Happy Families All Alike?
Jun Ma
64
25
0
01 Jan 2021
Robust Segmentation of Optic Disc and Cup from Fundus Images Using Deep
  Neural Networks
Robust Segmentation of Optic Disc and Cup from Fundus Images Using Deep Neural Networks
A. Manjunath
S. Jois
C. Seelamantula
21
3
0
13 Dec 2020
CHS-Net: A Deep learning approach for hierarchical segmentation of
  COVID-19 infected CT images
CHS-Net: A Deep learning approach for hierarchical segmentation of COVID-19 infected CT images
Narinder Singh Punn
Sonali Agarwal
29
31
0
13 Dec 2020
nnU-Net for Brain Tumor Segmentation
nnU-Net for Brain Tumor Segmentation
Fabian Isensee
Paul F. Jaeger
Peter M. Full
Philipp Vollmuth
Klaus H. Maier-Hein
20
292
0
02 Nov 2020
Comprehensive Comparison of Deep Learning Models for Lung and COVID-19
  Lesion Segmentation in CT scans
Comprehensive Comparison of Deep Learning Models for Lung and COVID-19 Lesion Segmentation in CT scans
Paschalis A. Bizopoulos
N. Vretos
P. Daras
30
17
0
10 Sep 2020
Inner Cell Mass and Trophectoderm Segmentation in Human Blastocyst
  Images using Deep Neural Network
Inner Cell Mass and Trophectoderm Segmentation in Human Blastocyst Images using Deep Neural Network
Md Yousuf Harun
Thomas T F Huang
A. Ohta
19
6
0
19 Aug 2020
MS-NAS: Multi-Scale Neural Architecture Search for Medical Image
  Segmentation
MS-NAS: Multi-Scale Neural Architecture Search for Medical Image Segmentation
Xingang Yan
Weiwen Jiang
Yiyu Shi
Cheng Zhuo
15
47
0
13 Jul 2020
CascadePSP: Toward Class-Agnostic and Very High-Resolution Segmentation
  via Global and Local Refinement
CascadePSP: Toward Class-Agnostic and Very High-Resolution Segmentation via Global and Local Refinement
Ho Kei Cheng
Jihoon Chung
Yu-Wing Tai
Chi-Keung Tang
SSeg
8
206
0
06 May 2020
Multi-level Context Gating of Embedded Collective Knowledge for Medical
  Image Segmentation
Multi-level Context Gating of Embedded Collective Knowledge for Medical Image Segmentation
Maryam Asadi-Aghbolaghi
Reza Azad
M. Fathy
Sergio Escalera
SSeg
15
60
0
10 Mar 2020
Towards Label-Free 3D Segmentation of Optical Coherence Tomography
  Images of the Optic Nerve Head Using Deep Learning
Towards Label-Free 3D Segmentation of Optical Coherence Tomography Images of the Optic Nerve Head Using Deep Learning
S. Devalla
T. Pham
S. Panda
Zhang Liang
Giridhar Subramanian
...
L. Schmetterer
S. Perera
Tin Aung
Alexandre Hoang Thiery
M. Girard
33
29
0
22 Feb 2020
How well do U-Net-based segmentation trained on adult cardiac magnetic
  resonance imaging data generalise to rare congenital heart diseases for
  surgical planning?
How well do U-Net-based segmentation trained on adult cardiac magnetic resonance imaging data generalise to rare congenital heart diseases for surgical planning?
Sven Koehler
A. Tandon
T. Hussain
H. Latus
T. Pickardt
S. Sarikouch
P. Beerbaum
G. Greil
Sandy Engelhardt
I. Wolf
18
6
0
10 Feb 2020
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