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ChronoFormer: Time-Aware Transformer Architectures for Structured Clinical Event Modeling

ChronoFormer: Time-Aware Transformer Architectures for Structured Clinical Event Modeling

10 April 2025
Yuanyun Zhang
Shi Li
ArXiv (abs)PDFHTML

Papers citing "ChronoFormer: Time-Aware Transformer Architectures for Structured Clinical Event Modeling"

20 / 20 papers shown
Title
Clinical ModernBERT: An efficient and long context encoder for biomedical text
Clinical ModernBERT: An efficient and long context encoder for biomedical text
Simon A. Lee
Anthony Wu
Jeffrey N. Chiang
MedIm
84
5
0
04 Apr 2025
When Raw Data Prevails: Are Large Language Model Embeddings Effective in
  Numerical Data Representation for Medical Machine Learning Applications?
When Raw Data Prevails: Are Large Language Model Embeddings Effective in Numerical Data Representation for Medical Machine Learning Applications?
Yanjun Gao
Skatje Myers
Shan Chen
Dmitriy Dligach
Timothy A Miller
Danielle S. Bitterman
M. Churpek
Majid Afshar
69
8
0
15 Aug 2024
Text Serialization and Their Relationship with the Conventional
  Paradigms of Tabular Machine Learning
Text Serialization and Their Relationship with the Conventional Paradigms of Tabular Machine Learning
Kyoka Ono
Simon A. Lee
LMTD
41
7
0
19 Jun 2024
Predictive Modeling with Temporal Graphical Representation on Electronic
  Health Records
Predictive Modeling with Temporal Graphical Representation on Electronic Health Records
Jiayuan Chen
Changchang Yin
Yuanlong Wang
Ping Zhang
75
5
0
07 May 2024
Can Large Language Models abstract Medical Coded Language?
Can Large Language Models abstract Medical Coded Language?
Simon A. Lee
Timothy Lindsey
ELMLM&MA
74
11
0
16 Mar 2024
Emergency Department Decision Support using Clinical Pseudo-notes
Emergency Department Decision Support using Clinical Pseudo-notes
Simon A. Lee
Sujay Jain
Alex Chen
Kyoka Ono
Jennifer Fang
Á. Rudas
Jeffrey N. Chiang
68
12
0
31 Jan 2024
TabLLM: Few-shot Classification of Tabular Data with Large Language
  Models
TabLLM: Few-shot Classification of Tabular Data with Large Language Models
S. Hegselmann
Alejandro Buendia
Hunter Lang
Monica Agrawal
Xiaoyi Jiang
David Sontag
LMTD
115
231
0
19 Oct 2022
Should You Mask 15% in Masked Language Modeling?
Should You Mask 15% in Masked Language Modeling?
Alexander Wettig
Tianyu Gao
Zexuan Zhong
Danqi Chen
CVBM
67
166
0
16 Feb 2022
GatorTron: A Large Clinical Language Model to Unlock Patient Information
  from Unstructured Electronic Health Records
GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Records
Xi Yang
Aokun Chen
Nima M. Pournejatian
Hoo-Chang Shin
Kaleb E. Smith
...
Duane A. Mitchell
W. Hogan
E. Shenkman
Jiang Bian
Yonghui Wu
AI4MHLM&MA
75
536
0
02 Feb 2022
CEHR-BERT: Incorporating temporal information from structured EHR data
  to improve prediction tasks
CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
Chao Pang
Xinzhuo Jiang
Krishna S. Kalluri
M. Spotnitz
Ruijun Chen
A. Perotte
Karthik Natarajan
OOD
40
62
0
10 Nov 2021
Hi-BEHRT: Hierarchical Transformer-based model for accurate prediction
  of clinical events using multimodal longitudinal electronic health records
Hi-BEHRT: Hierarchical Transformer-based model for accurate prediction of clinical events using multimodal longitudinal electronic health records
Yikuan Li
M. Mamouei
G. Salimi-Khorshidi
Shishir Rao
A. Hassaine
D. Canoy
Thomas Lukasiewicz
K. Rahimi
76
80
0
21 Jun 2021
Med-BERT: pre-trained contextualized embeddings on large-scale
  structured electronic health records for disease prediction
Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease prediction
L. Rasmy
Yang Xiang
Z. Xie
Cui Tao
Degui Zhi
AI4MHLM&MA
99
691
0
22 May 2020
Language Models Are An Effective Patient Representation Learning
  Technique For Electronic Health Record Data
Language Models Are An Effective Patient Representation Learning Technique For Electronic Health Record Data
E. Steinberg
Kenneth Jung
Jason Alan Fries
Conor K. Corbin
Stephen Pfohl
N. Shah
79
109
0
06 Jan 2020
TAPER: Time-Aware Patient EHR Representation
TAPER: Time-Aware Patient EHR Representation
Sajad Darabi
Mohammad Kachuee
Shayan Fazeli
Majid Sarrafzadeh
36
57
0
11 Aug 2019
BEHRT: Transformer for Electronic Health Records
BEHRT: Transformer for Electronic Health Records
Yikuan Li
Shishir Rao
J. R. A. Solares
A. Hassaine
D. Canoy
Yajie Zhu
K. Rahimi
G. Salimi-Khorshidi
OOD
107
461
0
22 Jul 2019
Publicly Available Clinical BERT Embeddings
Publicly Available Clinical BERT Embeddings
Emily Alsentzer
John R. Murphy
Willie Boag
W. Weng
Di Jin
Tristan Naumann
Matthew B. A. McDermott
AI4MH
156
1,979
0
06 Apr 2019
BioBERT: a pre-trained biomedical language representation model for
  biomedical text mining
BioBERT: a pre-trained biomedical language representation model for biomedical text mining
Jinhyuk Lee
Wonjin Yoon
Sungdong Kim
Donghyeon Kim
Sunkyu Kim
Chan Ho So
Jaewoo Kang
OOD
156
5,659
0
25 Jan 2019
Deep EHR: A Survey of Recent Advances in Deep Learning Techniques for
  Electronic Health Record (EHR) Analysis
Deep EHR: A Survey of Recent Advances in Deep Learning Techniques for Electronic Health Record (EHR) Analysis
B. Shickel
P. Tighe
A. Bihorac
Parisa Rashidi
BDL
91
1,117
0
12 Jun 2017
Gate-Variants of Gated Recurrent Unit (GRU) Neural Networks
Gate-Variants of Gated Recurrent Unit (GRU) Neural Networks
Rahul Dey
F. Salem
125
1,401
0
20 Jan 2017
RETAIN: An Interpretable Predictive Model for Healthcare using Reverse
  Time Attention Mechanism
RETAIN: An Interpretable Predictive Model for Healthcare using Reverse Time Attention Mechanism
Edward Choi
M. T. Bahadori
Joshua A. Kulas
A. Schuetz
Walter F. Stewart
Jimeng Sun
AI4TS
121
1,247
0
19 Aug 2016
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