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Immunogenicity Prediction with Dual Attention Enables Vaccine Target Selection
v1v2 (latest)

Immunogenicity Prediction with Dual Attention Enables Vaccine Target Selection

3 October 2024
Song Li
Yang Tan
Song Ke
Liang Hong
Bingxin Zhou
ArXiv (abs)PDFHTML

Papers citing "Immunogenicity Prediction with Dual Attention Enables Vaccine Target Selection"

9 / 9 papers shown
Title
Sequence-Only Prediction of Binding Affinity Changes: A Robust and Interpretable Model for Antibody Engineering
Sequence-Only Prediction of Binding Affinity Changes: A Robust and Interpretable Model for Antibody Engineering
Chen Liu
Mingchen Li
Yang Tan
Wenrui Gou
Guisheng Fan
Bingxin Zhou
47
0
0
14 May 2025
VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning
VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning
Y. Tan
Chen Liu
Jingyuan Gao
Banghao Wu
Mingchen Li
...
Lingrong Zhang
Huiqun Yu
Guisheng Fan
Liang Hong
Bingxin Zhou
86
3
0
19 Mar 2025
Retrieval-Enhanced Mutation Mastery: Augmenting Zero-Shot Prediction of
  Protein Language Model
Retrieval-Enhanced Mutation Mastery: Augmenting Zero-Shot Prediction of Protein Language Model
Y. Tan
Ruilin Wang
Banghao Wu
Liang Hong
Bingxin Zhou
77
13
0
28 Oct 2024
Secondary Structure-Guided Novel Protein Sequence Generation with Latent
  Graph Diffusion
Secondary Structure-Guided Novel Protein Sequence Generation with Latent Graph Diffusion
Yutong Hu
Y. Tan
Andi Han
Lirong Zheng
Liang Hong
Bingxin Zhou
DiffM
83
2
0
10 Jul 2024
Simple, Efficient and Scalable Structure-aware Adapter Boosts Protein
  Language Models
Simple, Efficient and Scalable Structure-aware Adapter Boosts Protein Language Models
Yang Tan
Mingchen Li
Bingxin Zhou
Bozitao Zhong
Lirong Zheng
P. Tan
Ziyi Zhou
Huiqun Yu
Guisheng Fan
Liang Hong
77
12
0
23 Apr 2024
Ankh: Optimized Protein Language Model Unlocks General-Purpose Modelling
Ankh: Optimized Protein Language Model Unlocks General-Purpose Modelling
Ahmed Elnaggar
Hazem Essam
Wafaa Salah-Eldin
Walid Moustafa
Mohamed Elkerdawy
Charlotte Rochereau
B. Rost
238
103
0
16 Jan 2023
SESNet: sequence-structure feature-integrated deep learning method for
  data-efficient protein engineering
SESNet: sequence-structure feature-integrated deep learning method for data-efficient protein engineering
Mingchen Li
Liqi Kang
Y. Xiong
Yu Wang
Guisheng Fan
P. Tan
Liang Hong
46
24
0
29 Dec 2022
RoFormer: Enhanced Transformer with Rotary Position Embedding
RoFormer: Enhanced Transformer with Rotary Position Embedding
Jianlin Su
Yu Lu
Shengfeng Pan
Ahmed Murtadha
Bo Wen
Yunfeng Liu
394
2,555
0
20 Apr 2021
Decoupled Weight Decay Regularization
Decoupled Weight Decay Regularization
I. Loshchilov
Frank Hutter
OffRL
175
2,166
0
14 Nov 2017
1