A Survey of Generative AI for de novo Drug Design: New Frontiers in
Molecule and Protein Generation

A Survey of Generative AI for de novo Drug Design: New Frontiers in Molecule and Protein Generation

13 February 2024

Elizabeth Knight

Mark B. Gerstein

Papers citing "A Survey of Generative AI for de novo Drug Design: New Frontiers in Molecule and Protein Generation"

13 / 13 papers shown

Title
MAMMAL -- Molecular Aligned Multi-Modal Architecture and Language Yoel Shoshan Moshiko Raboh Michal Ozery-Flato Vadim Ratner Alex Golts ... Sharon Kurant Joseph A. Morrone Parthasarathy Suryanarayanan Michal Rosen-Zvi Efrat Hexter 26 1 0 28 Oct 2024
PepGB: Facilitating peptide drug discovery via graph neural networks Yipin Lei Xu Wang Meng Fang Han Li Xiang Li Jianyang Zeng 13 1 0 26 Jan 2024
A Multi-Modal Contrastive Diffusion Model for Therapeutic Peptide Generation Yongkang Wang Xuan Liu Feng Huang Zhankun Xiong Wen Zhang 52 14 0 25 Dec 2023
Geometric Latent Diffusion Models for 3D Molecule Generation Minkai Xu Alexander Powers R. Dror Stefano Ermon J. Leskovec DiffM AI4CE 55 134 0 02 May 2023
Diffusion Models in Bioinformatics: A New Wave of Deep Learning Revolution in Action Zhiye Guo Jian Liu Yanli Wang Mengrui Chen Duolin Wang Dong Xu Jianlin Cheng MedIm AI4CE DiffM 46 22 0 13 Feb 2023
PiFold: Toward effective and efficient protein inverse folding Zhangyang Gao Cheng Tan Pablo Chacón Stan Z. Li AI4CE 67 104 0 22 Sep 2022
Diffusion Models: A Comprehensive Survey of Methods and Applications Ling Yang Zhilong Zhang Yingxia Shao Shenda Hong Runsheng Xu Yue Zhao Wentao Zhang Bin Cui Ming-Hsuan Yang DiffM MedIm 224 1,302 0 02 Sep 2022
Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabilistic Models N. Anand Tudor Achim DiffM 187 173 0 26 May 2022
A 3D Generative Model for Structure-Based Drug Design Shitong Luo Jiaqi Guan Jianzhu Ma Jian-wei Peng DiffM 67 178 0 20 Mar 2022
OntoProtein: Protein Pretraining With Gene Ontology Embedding Ningyu Zhang Zhen Bi Xiaozhuan Liang Shuyang Cheng Haosen Hong Shumin Deng J. Lian Qiang Zhang Huajun Chen 99 90 0 23 Jan 2022
Top-N: Equivariant set and graph generation without exchangeability Clément Vignac P. Frossard BDL 65 34 0 05 Oct 2021
The Power of Scale for Parameter-Efficient Prompt Tuning Brian Lester Rami Al-Rfou Noah Constant VPVLM 280 3,848 0 18 Apr 2021
Junction Tree Variational Autoencoder for Molecular Graph Generation Wengong Jin Regina Barzilay Tommi Jaakkola 224 1,338 0 12 Feb 2018