CHAMMI: A benchmark for channel-adaptive models in microscopy imaging

CHAMMI: A benchmark for channel-adaptive models in microscopy imaging

30 October 2023

Bryan A. Plummer

Juan C. Caicedo

Papers citing "CHAMMI: A benchmark for channel-adaptive models in microscopy imaging"

13 / 13 papers shown

Title
Causal integration of chemical structures improves representations of microscopy images for morphological profiling Yemin Yu Neil A. Tenenholtz Lester W. Mackey Ying Wei David Alvarez-Melis Ava P. Amini Alex X. Lu 31 0 0 13 Apr 2025
Noise-Aware Generalization: Robustness to In-Domain Noise and Out-of-Domain Generalization Siqi Wang Aoming Liu Bryan A. Plummer OOD 36 0 0 03 Apr 2025
ChA-MAEViT: Unifying Channel-Aware Masked Autoencoders and Multi-Channel Vision Transformers for Improved Cross-Channel Learning Chau Pham Juan C. Caicedo Bryan A. Plummer 47 0 0 25 Mar 2025
Isolated Channel Vision Transformers: From Single-Channel Pretraining to Multi-Channel Finetuning Wenyi Lian Joakim Lindblad Patrick Micke Natasa Sladoje 62 0 0 12 Mar 2025
Contrastive learning of cell state dynamics in response to perturbations Soorya Pradeep Alishba Imran Ziwen Liu Taylla Milena Theodoro Eduardo Hirata-Miyasaki ... Madhura Bhave Sudip Khadka Hunter Woosley Carolina Arias Shalin B. Mehta 26 0 0 15 Oct 2024
Enhancing Feature Diversity Boosts Channel-Adaptive Vision Transformers Chau Pham Bryan A. Plummer 37 3 0 26 May 2024
A Unified Framework for Connecting Noise Modeling to Boost Noise Detection Siqi Wang Chau Pham Bryan A. Plummer NoLa 36 0 0 30 Nov 2023
LNL+K: Enhancing Learning with Noisy Labels Through Noise Source Knowledge Integration Siqi Wang Bryan A. Plummer 18 2 0 20 Jun 2023
Hierarchical discriminative learning improves visual representations of biomedical microscopy Cheng Jiang X. Hou A. Kondepudi Asadur Chowdury C. Freudiger D. Orringer Honglak Lee Todd C. Hollon 24 12 0 02 Mar 2023
Emerging Properties in Self-Supervised Vision Transformers Mathilde Caron Hugo Touvron Ishan Misra Hervé Jégou Julien Mairal Piotr Bojanowski Armand Joulin 308 5,773 0 29 Apr 2021
SWAD: Domain Generalization by Seeking Flat Minima Junbum Cha Sanghyuk Chun Kyungjae Lee Han-Cheol Cho Seunghyun Park Yunsung Lee Sungrae Park MoMe 216 423 0 17 Feb 2021
MobileNets: Efficient Convolutional Neural Networks for Mobile Vision Applications Andrew G. Howard Menglong Zhu Bo Chen Dmitry Kalenichenko Weijun Wang Tobias Weyand M. Andreetto Hartwig Adam 3DH 950 20,561 0 17 Apr 2017
Aggregated Residual Transformations for Deep Neural Networks Saining Xie Ross B. Girshick Piotr Dollár Z. Tu Kaiming He 297 10,216 0 16 Nov 2016