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MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed
  Search Logs for Zero-shot Biomedical Information Retrieval

MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval

2 July 2023
Qiao Jin
Won Kim
Qingyu Chen
Donald C. Comeau
Lana Yeganova
John Wilbur
Zhiyong Lu
    LM&MA
    MedIm
ArXivPDFHTML

Papers citing "MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval"

21 / 21 papers shown
Title
The Evolving Landscape of Generative Large Language Models and Traditional Natural Language Processing in Medicine
The Evolving Landscape of Generative Large Language Models and Traditional Natural Language Processing in Medicine
Rui Yang
Yiming Li
Matthew Yu Heng Wong
Y. Ke
Xin Li
...
Irene Li
Douglas Teodoro
Chuan Hong
Daniel Ting
Nan Liu
LM&MA
MedIm
24
0
0
15 May 2025
Zero-shot Domain Generalization of Foundational Models for 3D Medical Image Segmentation: An Experimental Study
Zero-shot Domain Generalization of Foundational Models for 3D Medical Image Segmentation: An Experimental Study
Soumitri Chattopadhyay
Basar Demir
Marc Niethammer
VLM
72
0
0
28 Mar 2025
Enabling Inclusive Systematic Reviews: Incorporating Preprint Articles with Large Language Model-Driven Evaluations
Enabling Inclusive Systematic Reviews: Incorporating Preprint Articles with Large Language Model-Driven Evaluations
Rui Yang
Jiayi Tong
Haoyuan Wang
Hui Huang
Ziyang Hu
...
Nan Liu
Christopher J. Lindsell
Michael J. Pencina
Yong Chen
Chuan Hong
AI4CE
50
0
0
18 Mar 2025
MedAgentsBench: Benchmarking Thinking Models and Agent Frameworks for Complex Medical Reasoning
MedAgentsBench: Benchmarking Thinking Models and Agent Frameworks for Complex Medical Reasoning
Xiangru Tang
Daniel Shao
Jiwoong Sohn
Jiapeng Chen
Jiayi Zhang
...
Yilun Zhao
Chenglin Wu
Wenqi Shi
Arman Cohan
Mark B. Gerstein
AI4MH
LRM
ELM
LM&MA
72
4
0
10 Mar 2025
Assessing the Impact of the Quality of Textual Data on Feature Representation and Machine Learning Models
Assessing the Impact of the Quality of Textual Data on Feature Representation and Machine Learning Models
Tabinda Sarwar
Antonio Jose Jimeno Yepes
Lawrence Cavedon
71
0
0
12 Feb 2025
Mix-of-Granularity: Optimize the Chunking Granularity for Retrieval-Augmented Generation
Mix-of-Granularity: Optimize the Chunking Granularity for Retrieval-Augmented Generation
Zijie Zhong
Hanwen Liu
Xiaoya Cui
Xiaofan Zhang
Zengchang Qin
92
7
0
28 Jan 2025
Can Medical Vision-Language Pre-training Succeed with Purely Synthetic Data?
Can Medical Vision-Language Pre-training Succeed with Purely Synthetic Data?
Che Liu
Zhongwei Wan
Haozhe Wang
Yinda Chen
T. Qaiser
Chen Jin
Fariba Yousefi
Nikolay Burlutskiy
Rossella Arcucci
VLM
SyDa
LM&MA
MedIm
69
2
0
17 Oct 2024
ColaCare: Enhancing Electronic Health Record Modeling through Large Language Model-Driven Multi-Agent Collaboration
ColaCare: Enhancing Electronic Health Record Modeling through Large Language Model-Driven Multi-Agent Collaboration
Zixiang Wang
Yinghao Zhu
Huiya Zhao
Xiaochen Zheng
Tianlong Wang
...
Yasha Wang
Ewen M. Harrison
Junyi Gao
Liantao Ma
Liantao Ma
55
1
0
03 Oct 2024
EEG-Language Modeling for Pathology Detection
EEG-Language Modeling for Pathology Detection
Sam Gijsen
Kerstin Ritter
52
0
0
02 Sep 2024
MedTrinity-25M: A Large-scale Multimodal Dataset with Multigranular Annotations for Medicine
MedTrinity-25M: A Large-scale Multimodal Dataset with Multigranular Annotations for Medicine
Yunfei Xie
Ce Zhou
Lang Gao
Juncheng Wu
Xianhang Li
...
Sheng Liu
Lei Xing
James Zou
Cihang Xie
Yuyin Zhou
LM&MA
MedIm
74
25
0
06 Aug 2024
Retrieval-Augmented Generation for Natural Language Processing: A Survey
Retrieval-Augmented Generation for Natural Language Processing: A Survey
Shangyu Wu
Ying Xiong
Yufei Cui
Haolun Wu
Can Chen
...
Lianming Huang
Xue Liu
Tei-Wei Kuo
Nan Guan
Chun Jason Xue
3DV
RALM
40
27
0
18 Jul 2024
CancerLLM: A Large Language Model in Cancer Domain
CancerLLM: A Large Language Model in Cancer Domain
Mingchen Li
Jiatan Huang
Jeremy Yeung
A. Blaes
Steven Johnson
Hongfang Liu
Hua Xu
Rui Zhang
ELM
LM&MA
34
5
0
15 Jun 2024
BMRetriever: Tuning Large Language Models as Better Biomedical Text
  Retrievers
BMRetriever: Tuning Large Language Models as Better Biomedical Text Retrievers
Ran Xu
Wenqi Shi
Yue Yu
Yuchen Zhuang
Yanqiao Zhu
M. D. Wang
Joyce C. Ho
Chao Zhang
Carl Yang
LM&MA
40
19
0
29 Apr 2024
MedExpQA: Multilingual Benchmarking of Large Language Models for Medical
  Question Answering
MedExpQA: Multilingual Benchmarking of Large Language Models for Medical Question Answering
Inigo Alonso
Maite Oronoz
Rodrigo Agerri
AI4MH
LM&MA
ELM
57
16
1
08 Apr 2024
Improving Medical Reasoning through Retrieval and Self-Reflection with
  Retrieval-Augmented Large Language Models
Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models
Minbyul Jeong
Jiwoong Sohn
Mujeen Sung
Jaewoo Kang
23
29
0
27 Jan 2024
Large-scale Long-tailed Disease Diagnosis on Radiology Images
Large-scale Long-tailed Disease Diagnosis on Radiology Images
Qiaoyu Zheng
Weike Zhao
Chaoyi Wu
Xiaoman Zhang
Lisong Dai
Hengyu Guan
Yuehua Li
Ya Zhang
Yanfeng Wang
Weidi Xie
LM&MA
MedIm
40
5
0
26 Dec 2023
CoRTEx: Contrastive Learning for Representing Terms via Explanations
  with Applications on Constructing Biomedical Knowledge Graphs
CoRTEx: Contrastive Learning for Representing Terms via Explanations with Applications on Constructing Biomedical Knowledge Graphs
Huaiyuan Ying
Zhengyun Zhao
Yang Zhao
Sihang Zeng
Sheng Yu
33
3
0
13 Dec 2023
Opportunities and Challenges for ChatGPT and Large Language Models in
  Biomedicine and Health
Opportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health
Shubo Tian
Qiao Jin
Lana Yeganova
Po-Ting Lai
Qingqing Zhu
...
Donald C. Comeau
R. Islamaj
Aadit Kapoor
Xin Gao
Zhiyong Lu
LM&MA
MedIm
AI4MH
117
211
0
15 Jun 2023
Text and Code Embeddings by Contrastive Pre-Training
Text and Code Embeddings by Contrastive Pre-Training
Arvind Neelakantan
Tao Xu
Raul Puri
Alec Radford
Jesse Michael Han
...
Tabarak Khan
Toki Sherbakov
Joanne Jang
Peter Welinder
Lilian Weng
SSL
AI4TS
232
425
0
24 Jan 2022
BEIR: A Heterogenous Benchmark for Zero-shot Evaluation of Information
  Retrieval Models
BEIR: A Heterogenous Benchmark for Zero-shot Evaluation of Information Retrieval Models
Nandan Thakur
Nils Reimers
Andreas Rucklé
Abhishek Srivastava
Iryna Gurevych
VLM
270
975
0
17 Apr 2021
Pretrained Transformers for Text Ranking: BERT and Beyond
Pretrained Transformers for Text Ranking: BERT and Beyond
Jimmy J. Lin
Rodrigo Nogueira
Andrew Yates
VLM
244
612
0
13 Oct 2020
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