On the surprising effectiveness of a simple matrix exponential
derivative approximation, with application to global SARS-CoV-2

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On the surprising effectiveness of a simple matrix exponential derivative approximation, with application to global SARS-CoV-2

28 June 2023

Andrew J Holbrook

Andrew F. Magee

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Papers citing "On the surprising effectiveness of a simple matrix exponential derivative approximation, with application to global SARS-CoV-2"

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Title
Random-effects substitution models for phylogenetics via scalable gradient approximations Andrew F. Magee Andrew J Holbrook J. Pekar Itzue W. Caviedes-Solis IV FredrickA.Matsen G. Baele J. Wertheim Xiang Ji P. Lemey M. Suchard 31 5 0 23 Mar 2023
$Gradients do grow on trees: a linear-time ${\cal O}\hspace{-0.2em}\left( N \right)$-dimensional gradient for statistical phylogenetics$ Gradients do grow on trees: a linear-time ${\cal O}\hspace{-0.2em}\left( N \right)$ -dimensional gradient for statistical phylogenetics X. Ji Zhenyu Zhang Andrew J Holbrook A. Nishimura G. Baele A. Rambaut P. Lemey M. Suchard 24 31 0 29 May 2019
Emulation of Higher-Order Tensors in Manifold Monte Carlo Methods for Bayesian Inverse Problems Shiwei Lan T. Bui-Thanh M. Christie Mark Girolami 82 58 0 22 Jul 2015
Precomputing Strategy for Hamiltonian Monte Carlo Method Based on Regularity in Parameter Space Cheng Zhang Babak Shahbaba Hongkai Zhao 46 15 0 06 Apr 2015