DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species
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DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome

26 June 2023

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Papers citing "DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome"

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Title
Large Language Models in Plant Biology H. Lam Xing Er Ong Marek Mutwil 41 23 0 05 Jan 2024
Predicting Anti-microbial Resistance using Large Language Models Hyunwoo Yoo B. Sokhansanj James R. Brown G. Rosen LM&MA 29 3 0 01 Jan 2024
Beyond PID Controllers: PPO with Neuralized PID Policy for Proton Beam Intensity Control in Mu2e Chenwei Xu Jerry Yao-Chieh Hu A. Narayanan M. Thieme V. Nagaslaev ... Rui Shi S. Memik A. Shuping Kyle Hazelwood Han Liu 43 2 0 28 Dec 2023
BEND: Benchmarking DNA Language Models on biologically meaningful tasks Frederikke Isa Marin Felix Teufel Marc Horlacher Dennis Madsen Dennis Pultz Ole Winther Wouter Boomsma 83 38 0 21 Nov 2023
To Transformers and Beyond: Large Language Models for the Genome Micaela Elisa Consens Cameron Dufault Michael Wainberg Duncan Forster Mehran Karimzadeh Hani Goodarzi Fabian J. Theis Alan Moses Bo Wang LM&MA MedIm 68 33 0 13 Nov 2023
BarcodeBERT: Transformers for Biodiversity Analysis Pablo Millán Arias Niousha Sadjadi Monireh Safari ZeMing Gong Austin T. Wang ... Dirk Steinke Lila Kari Lila Kari Angel X. Chang Graham W. Taylor 128 7 0 04 Nov 2023
Splicing Up Your Predictions with RNA Contrastive Learning Phil Fradkin Ruian Shi Bo Wang Brendan Frey Leo J. Lee SSL 69 0 0 12 Oct 2023
Embed-Search-Align: DNA Sequence Alignment using Transformer Models Pavan Holur Kenneth Enevoldsen Shreyas Rajesh L. Mboning Thalia Georgiou Louis-S. Bouchard Matteo Pellegrini V. Roychowdhury 82 0 0 20 Sep 2023
Open-Ended Multi-Modal Relational Reasoning for Video Question Answering Haozheng Luo Ruiyang Qin Chenwei Xu Guo Ye Zening Luo 106 4 0 01 Dec 2020
Question Classification with Deep Contextualized Transformer Haozheng Luo Ningwei Liu Charles Feng 88 2 0 17 Oct 2019