PoET: A generative model of protein families as sequences-of-sequences

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PoET: A generative model of protein families as sequences-of-sequences

9 June 2023

Timothy F. Truong

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Papers citing "PoET: A generative model of protein families as sequences-of-sequences"

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Title
Protriever: End-to-End Differentiable Protein Homology Search for Fitness Prediction Ruben Weitzman Peter Mørch Groth Lood Van Niekerk Aoi Otani Y. Gal D. Marks Pascal Notin 30 0 0 10 Jun 2025
Bio-xLSTM: Generative modeling, representation and in-context learning of biological and chemical sequences Niklas Schmidinger Lisa Schneckenreiter Philipp Seidl Johannes Schimunek Pieter-Jan Hoedt Johannes Brandstetter Andreas Mayr Sohvi Luukkonen Sepp Hochreiter Günter Klambauer MedIm 158 5 0 06 Nov 2024
MutaPLM: Protein Language Modeling for Mutation Explanation and Engineering Yizhen Luo Zikun Nie Massimo Hong Suyuan Zhao Hao Zhou Zaiqing Nie 149 1 0 30 Oct 2024
Metalic: Meta-Learning In-Context with Protein Language Models Jacob Beck Shikha Surana Manus McAuliffe Oliver Bent Thomas D. Barrett Juan Jose Garau Luis Paul Duckworth AI4CE 83 1 0 10 Oct 2024
Uncertainty-aware Human Mobility Modeling and Anomaly Detection Haomin Wen Shurui Cao Z. Rasheed Khurram Hassan-Shafique Leman Akoglu 148 0 0 02 Oct 2024
Towards Effective and Efficient Continual Pre-training of Large Language Models Jie Chen Zhipeng Chen Jiapeng Wang Kun Zhou Yutao Zhu ... Rui Yan Zhewei Wei Di Hu Wenbing Huang Ji-Rong Wen KELM ALM CLL ELM LRM 337 6 0 26 Jul 2024
Genomic Language Models: Opportunities and Challenges Gonzalo Benegas Chengzhong Ye C. Albors Jianan Canal Li Yun S. Song AI4CE LM&MA ELM 129 25 0 16 Jul 2024
Secondary Structure-Guided Novel Protein Sequence Generation with Latent Graph Diffusion Yutong Hu Y. Tan Andi Han Lirong Zheng Liang Hong Bingxin Zhou DiffM 83 2 0 10 Jul 2024
MSAGPT: Neural Prompting Protein Structure Prediction via MSA Generative Pre-Training Bo Chen Zhilei Bei Xingyi Cheng Pan Li Jie Tang Le Song 147 4 0 08 Jun 2024
Retrieval-Augmented Generation for AI-Generated Content: A Survey Penghao Zhao Hailin Zhang Qinhan Yu Zhengren Wang Yunteng Geng Fangcheng Fu Ling Yang Wentao Zhang Jie Jiang Tengjiao Wang 3DV 290 286 0 29 Feb 2024
Retrieved Sequence Augmentation for Protein Representation Learning Chang Ma Haiteng Zhao Lin Zheng Jiayi Xin Qintong Li Lijun Wu Zhihong Deng Yang Lu Qi Liu Lingpeng Kong AI4TS 72 10 0 24 Feb 2023