End-to-End Models for Chemical-Protein Interaction Extraction: Better Tokenization and Span-Based Pipeline Strategies

3 April 2023

Papers citing "End-to-End Models for Chemical-Protein Interaction Extraction: Better Tokenization and Span-Based Pipeline Strategies"

6 / 6 papers shown

Title
A Benchmark for End-to-End Zero-Shot Biomedical Relation Extraction with LLMs: Experiments with OpenAI Models Aviv Brokman Xuguang Ai Yuhang Jiang Shashank Gupta Ramakanth Kavuluru SyDa LM&MA 29 0 0 05 Apr 2025
Do LLMs Surpass Encoders for Biomedical NER? Motasem S Obeidat Md Sultan al Nahian R. Kavuluru 41 0 0 01 Apr 2025
Relation Extraction with Instance-Adapted Predicate Descriptions Yuhang Jiang Ramakanth Kavuluru 53 0 0 22 Mar 2025
Comparison of pipeline, sequence-to-sequence, and GPT models for end-to-end relation extraction: experiments with the rare disease use-case Shashank Gupta Xuguang Ai Ramakanth Kavuluru 16 3 0 22 Nov 2023
BigBIO: A Framework for Data-Centric Biomedical Natural Language Processing Jason Alan Fries Leon Weber Natasha Seelam Gabriel Altay Debajyoti Datta ... Minh Chien Vu Trishala Neeraj Jonas Golde Albert Villanova del Moral Benjamin Beilharz LM&MA 95 46 0 30 Jun 2022
Stanza: A Python Natural Language Processing Toolkit for Many Human Languages Peng Qi Yuhao Zhang Yuhui Zhang Jason Bolton Christopher D. Manning AI4TS 210 1,654 0 16 Mar 2020