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Reads2Vec: Efficient Embedding of Raw High-Throughput Sequencing Reads Data

Reads2Vec: Efficient Embedding of Raw High-Throughput Sequencing Reads Data

Prakash Chourasia
Sarwan Ali
Simone Ciccolella
G. D. Vedova
Murray Patterson
ArXiv (abs)PDFHTML

Papers citing "Reads2Vec: Efficient Embedding of Raw High-Throughput Sequencing Reads Data"

9 / 9 papers shown
Title
Efficient Approximate Kernel Based Spike Sequence Classification
Efficient Approximate Kernel Based Spike Sequence Classification
Sarwan Ali
Bikram Sahoo
Muhammad Asad Khan
A. Zelikovsky
Imdadullah Khan
Murray Patterson
AI4TS
52
22
0
11 Sep 2022
PWM2Vec: An Efficient Embedding Approach for Viral Host Specification from Coronavirus Spike Sequences
PWM2Vec: An Efficient Embedding Approach for Viral Host Specification from Coronavirus Spike Sequences
Sarwan Ali
B. Bello
Prakash Chourasia
Ria Thazhe Punathil
Yijing Zhou
M. Patterson
62
43
0
06 Jan 2022
Robust Representation and Efficient Feature Selection Allows for Effective Clustering of SARS-CoV-2 Variants
Robust Representation and Efficient Feature Selection Allows for Effective Clustering of SARS-CoV-2 Variants
Z. Tayebi
Sarwan Ali
M. Patterson
64
20
0
18 Oct 2021
Efficient Analysis of COVID-19 Clinical Data using Machine Learning Models
Efficient Analysis of COVID-19 Clinical Data using Machine Learning Models
Sarwan Ali
Yijing Zhou
M. Patterson
OOD
94
32
0
18 Oct 2021
Effective and scalable clustering of SARS-CoV-2 sequences
Effective and scalable clustering of SARS-CoV-2 sequences
Sarwan Ali
Tamkanat E. Ali
Muhammad Asad Khan
Imdadullah Khan
M. Patterson
68
31
0
18 Aug 2021
A k-mer Based Approach for SARS-CoV-2 Variant Identification
A k-mer Based Approach for SARS-CoV-2 Variant Identification
Sarwan Ali
Bikram Sahoo
N. Ullah
Alexander Zelikovskiy
M. Patterson
Imdadullah Khan
133
39
0
07 Aug 2021
Predicting Attributes of Nodes Using Network Structure
Predicting Attributes of Nodes Using Network Structure
Sarwan Ali
M. Shakeel
Imdadullah Khan
S. Faizullah
Muhammad Asad Khan
GNN
49
31
0
27 Dec 2019
Detecting DDoS Attack on SDN Due to Vulnerabilities in OpenFlow
Detecting DDoS Attack on SDN Due to Vulnerabilities in OpenFlow
Sarwan Ali
Maria K. Alvi
S. Faizullah
Muhammad Asad Khan
Abdullah Alshanqiti
Imdadullah Khan
62
35
0
27 Dec 2019
SMOTE: Synthetic Minority Over-sampling Technique
SMOTE: Synthetic Minority Over-sampling Technique
Nitesh Chawla
Kevin W. Bowyer
Lawrence Hall
W. Kegelmeyer
AI4TS
374
25,678
0
09 Jun 2011

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