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3D UX-Net: A Large Kernel Volumetric ConvNet Modernizing Hierarchical Transformer for Medical Image Segmentation

29 September 2022

Ho Hin Lee

Shunxing Bao

Yuankai Huo

Bennett A. Landman

OOD

MedIm

ArXiv (abs)PDF HTML Github (268★)

Papers citing "3D UX-Net: A Large Kernel Volumetric ConvNet Modernizing Hierarchical Transformer for Medical Image Segmentation"

50 / 58 papers shown

Title
DM-SegNet: Dual-Mamba Architecture for 3D Medical Image Segmentation with Global Context Modeling Hangyu Ji Mamba 147 0 0 05 Jun 2025
Rep3D: Re-parameterize Large 3D Kernels with Low-Rank Receptive Modeling for Medical Imaging Ho Hin Lee Quan Liu Shunxing Bao Yuankai Huo Bennett A. Landman MedIm 40 0 0 26 May 2025
TAGS: 3D Tumor-Adaptive Guidance for SAM Sirui Li Linkai Peng Zheyuan Zhang Gorkem Durak Ulas Bagci MedIm VLM 208 0 0 21 May 2025
VIViT: Variable-Input Vision Transformer Framework for 3D MR Image Segmentation Badhan Kumar Das Ajay Singh Gengyan Zhao Han Liu Thomas J. Re Dorin Comaniciu Eli Gibson Andreas Maier ViT MedIm 73 0 0 13 May 2025
Mamba Based Feature Extraction And Adaptive Multilevel Feature Fusion For 3D Tumor Segmentation From Multi-modal Medical Image Zexin Ji Beiji Zou Xiaoyan Kui Hua Li P. Vera S. Ruan Mamba 90 0 0 30 Apr 2025
TextDiffSeg: Text-guided Latent Diffusion Model for 3d Medical Images Segmentation Kangbo Ma MedIm 72 0 0 16 Apr 2025
UKBOB: One Billion MRI Labeled Masks for Generalizable 3D Medical Image Segmentation Emmanuelle Bourigault A. Jamaludin Abdullah Hamdi 86 1 0 09 Apr 2025
DBF-UNet: A Two-Stage Framework for Carotid Artery Segmentation with Pseudo-Label Generation Haoxuan Li Wei song Aofan Liu Peiwu Qin 68 0 0 01 Apr 2025
WaveFormer: A 3D Transformer with Wavelet-Driven Feature Representation for Efficient Medical Image Segmentation Md. Mahfuz Al Hasan Mahdi Zaman Abdul Jawad Alberto Santamaria-Pang Ho Hin Lee ... Md Shah Imran Antika Roy Y. P. Fallah Navid Asadizanjani Reza Forghani MedIm 71 0 0 31 Mar 2025
MM-UNet: Meta Mamba UNet for Medical Image Segmentation Bin Xie Yan Yan Gady Agam Mamba 101 0 0 21 Mar 2025
Towards Universal Text-driven CT Image Segmentation Yuheng Li Yuxiang Lai Maria Thor Deborah Marshall Zachary Buchwald D. Yu Xiaofeng Yang MedIm VLM 117 3 0 08 Mar 2025
vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentation Bastian Wittmann Yannick Wattenberg Tamaz Amiranashvili Suprosanna Shit Bjoern Menze 172 4 0 26 Nov 2024
FANCL: Feature-Guided Attention Network with Curriculum Learning for Brain Metastases Segmentation Zijiang Liu Xiaoyu Liu Linhao Qu Yonghong Shi MedIm 97 0 0 29 Oct 2024
MedUniSeg: 2D and 3D Medical Image Segmentation via a Prompt-driven Universal Model Yiwen Ye Ziyang Chen Jianpeng Zhang Yutong Xie Yong Xia MedIm 63 3 0 08 Oct 2024
EM-Net: Efficient Channel and Frequency Learning with Mamba for 3D Medical Image Segmentation Ao Chang Jiajun Zeng Ruobing Huang Dong Ni Mamba 85 3 0 26 Sep 2024
Tri-Plane Mamba: Efficiently Adapting Segment Anything Model for 3D Medical Images Hualiang Wang Yiqun Lin Xinpeng Ding Xuelong Li Mamba 98 3 0 13 Sep 2024
MobileUNETR: A Lightweight End-To-End Hybrid Vision Transformer For Efficient Medical Image Segmentation Shehan Perera Yunus Erzurumlu Deepak Gulati Alper Yilmaz ViT MedIm 73 0 0 04 Sep 2024
Prototype Learning Guided Hybrid Network for Breast Tumor Segmentation in DCE-MRI Lei Zhou Yuzhong Zhang Jiadong Zhang Xuejun Qian Chen Gong ... Zhongxiang Ding Xing Wang Zhenhui Li Zaiyi Liu Dinggang Shen MedIm 105 8 0 11 Aug 2024
Swin SMT: Global Sequential Modeling in 3D Medical Image Segmentation Szymon Płotka Maciej Chrabaszcz Przemyslaw Biecek 62 2 0 10 Jul 2024
xLSTM-UNet can be an Effective 2D & 3D Medical Image Segmentation Backbone with Vision-LSTM (ViL) better than its Mamba Counterpart Tianrun Chen Chaotao Ding Lanyun Zhu Tao Xu Deyi Ji Yan Wang Ying Zang Ziyue Li MedIm Mamba 115 15 0 01 Jul 2024
Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging cases Xiangde Luo Zihan Li Shaoting Zhang Wenjun Liao Guotai Wang OOD 82 4 0 19 Jun 2024
BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once Theodore Zhao Yu Gu Jianwei Yang Naoto Usuyama Ho Hin Lee ... B. Piening Carlo Bifulco Mu-Hsin Wei Hoifung Poon Sheng Wang MedIm 103 28 0 21 May 2024
PRISM: A Promptable and Robust Interactive Segmentation Model with Visual Prompts Hao Li Han Liu Dewei Hu Jiacheng Wang I. Oguz VLM 81 10 0 23 Apr 2024
LUCF-Net: Lightweight U-shaped Cascade Fusion Network for Medical Image Segmentation Songkai Sun Qingshan She Yuliang Ma Rihui Li Yingchun Zhang MedIm 66 1 0 11 Apr 2024
AgileFormer: Spatially Agile Transformer UNet for Medical Image Segmentation Peijie Qiu Jin Yang Sayantan Kumar S. Ghosh Aristeidis Sotiras MedIm 111 11 0 29 Mar 2024
PIPNet3D: Interpretable Detection of Alzheimer in MRI Scans Lisa Anita De Santi Jorg Schlotterer Michael Scheschenja Joel Wessendorf Meike Nauta Vincenzo Positano Christin Seifert MedIm 47 3 0 27 Mar 2024
Clustering Propagation for Universal Medical Image Segmentation Yuhang Ding Liulei Li Wenguan Wang Yi Yang 95 12 0 25 Mar 2024
Towards a Comprehensive, Efficient and Promptable Anatomic Structure Segmentation Model using 3D Whole-body CT Scans Heng Guo Jianfeng Zhang Jiaxing Huang Tony C. W. Mok Dazhou Guo Ke Yan Le Lu Dakai Jin Minfeng Xu MedIm 31 6 0 22 Mar 2024
D-Net: Dynamic Large Kernel with Dynamic Feature Fusion for Volumetric Medical Image Segmentation Jin Yang Peijie Qiu Yichi Zhang Daniel S. Marcus Aristeidis Sotiras MedIm 82 13 0 15 Mar 2024
SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation Zhaohu Xing Tian-Chun Ye Yijun Yang Guang Liu Lei Zhu Mamba 145 232 0 24 Jan 2024
Slicer Networks Hang Zhang Xiang Chen Rongguang Wang Renjiu Hu Dongdong Liu Gaolei Li MedIm 89 3 0 18 Jan 2024
PMFSNet: Polarized Multi-scale Feature Self-attention Network For Lightweight Medical Image Segmentation Jiahui Zhong Wenhong Tian Yuanlun Xie Zhijia Liu Jie Ou Taoran Tian Lei Zhang 53 10 0 15 Jan 2024
Leveraging Frequency Domain Learning in 3D Vessel Segmentation Xinyuan Wang Changzai Pan Hongming Dai Gangming Zhao Jinpeng Li Xiao Zhang Yizhou Yu 62 0 0 11 Jan 2024
MDD-UNet: Domain Adaptation for Medical Image Segmentation with Theoretical Guarantees, a Proof of Concept Asbjorn Munk Ao Ma Mads Nielsen OOD 42 2 0 19 Dec 2023
PnPNet: Pull-and-Push Networks for Volumetric Segmentation with Boundary Confusion Xin You Ming Ding Minghui Zhang Hanxiao Zhang Yi Yu Jie Yang Yun Gu 128 2 0 13 Dec 2023
3D-MIR: A Benchmark and Empirical Study on 3D Medical Image Retrieval in Radiology Asma Ben Abacha Alberto Santamaría-Pang Ho Hin Lee J. Merkow Qin Cai ... Julia Gong M. Lungren Thomas Lin Noel C. F. Codella Ivan Tarapov 65 5 0 23 Nov 2023
SegVol: Universal and Interactive Volumetric Medical Image Segmentation Yuxin Du Fan Bai Tiejun Huang Bo Zhao VLM 153 44 0 22 Nov 2023
Semi-supervised Medical Image Segmentation via Query Distribution Consistency Rong Wu Dehua Li Cong Zhang 56 1 0 21 Nov 2023
DEFN: Dual-Encoder Fourier Group Harmonics Network for Three-Dimensional Indistinct-Boundary Object Segmentation Xiaohua Jiang Yihao Guo Jian Huang Yuting Wu Meiyi Luo ... Xingru Huang Hong He Shaowei Jiang Jing Ye Mang Xiao 52 0 0 01 Nov 2023
Promise:Prompt-driven 3D Medical Image Segmentation Using Pretrained Image Foundation Models Hao Li Han Liu Dewei Hu Jiacheng Wang I. Oguz MedIm 55 22 0 30 Oct 2023
Vision Transformers increase efficiency of 3D cardiac CT multi-label segmentation Lee Jollans Mariana Bustamante L. Henriksson Anders Persson T. Ebbers MedIm ViT 81 0 0 13 Oct 2023
DeformUX-Net: Exploring a 3D Foundation Backbone for Medical Image Segmentation with Depthwise Deformable Convolution Ho Hin Lee Quan Liu Qi Yang Xin Yu Shunxing Bao Yuankai Huo Bennett A. Landman MedIm 119 2 0 30 Sep 2023
MA-SAM: Modality-agnostic SAM Adaptation for 3D Medical Image Segmentation Cheng Chen Juzheng Miao Dufan Wu Zhiling Yan Sekeun Kim ... Lichao Sun Xiang Li Tianming Liu Pheng-Ann Heng Quanzheng Li MedIm 129 63 0 16 Sep 2023
Large-kernel Attention for Efficient and Robust Brain Lesion Segmentation Liam Chalcroft Ruben Lourencco Pereira Mikael Brudfors Andrew S. Kayser M. D’Esposito Cathy J. Price Ioannis Pappas John Ashburner ViT 3DV MedIm 81 8 0 14 Aug 2023
3DSAM-adapter: Holistic Adaptation of SAM from 2D to 3D for Promptable Medical Image Segmentation Shizhan Gong Yuan Zhong Wenao Ma Jinpeng Li Zhao Wang Jingyang Zhang Pheng-Ann Heng Qi Dou MedIm 51 80 0 23 Jun 2023
Learnable Weight Initialization for Volumetric Medical Image Segmentation Shahina Kunhimon Abdelrahman M. Shaker Muzammal Naseer Salman Khan Fahad Shahbaz Khan 106 1 0 15 Jun 2023
Multi-Contrast Computed Tomography Atlas of Healthy Pancreas Yinchi Zhou Ho Hin Lee Yucheng Tang Xin Yu Qi Yang Shunxing Bao J. Spraggins Yuankai Huo Bennett A. Landman 40 2 0 02 Jun 2023
S4M: Generating Radiology Reports by A Single Model for Multiple Body Parts Qi Chen Yutong Xie Biao Wu Minh-Son To James Ang Qi Wu 44 3 0 26 May 2023
COSST: Multi-organ Segmentation with Partially Labeled Datasets Using Comprehensive Supervisions and Self-training Han Liu Zhoubing Xu Riqiang Gao Hao Li Jiadong Wang G. Chabin I. Oguz Sasa Grbic 112 17 0 27 Apr 2023
Improving Stain Invariance of CNNs for Segmentation by Fusing Channel Attention and Domain-Adversarial Training Kudaibergen Abutalip Numan Saeed Mustaqeem Khan Abdulmotaleb El Saddik 60 2 0 22 Apr 2023