Segmentation in large-scale cellular electron microscopy with deep learning: A literature survey

14 June 2022

Papers citing "Segmentation in large-scale cellular electron microscopy with deep learning: A literature survey"

22 / 22 papers shown

Title
Contrastive Learning for Mitochondria Segmentation Zhili Li Xuejin Chen Jie Zhao Zhiwei Xiong 13 7 0 25 Sep 2021
Stable deep neural network architectures for mitochondria segmentation on electron microscopy volumes Daniel Franco-Barranco A. Muñoz-Barrutia Ignacio Arganda-Carreras 26 25 0 08 Apr 2021
HIVE-Net: Centerline-Aware HIerarchical View-Ensemble Convolutional Network for Mitochondria Segmentation in EM Images Zhimin Yuan Xiaofeng Ma Jiajin Yi Zhengrong Luo Jialin Peng 43 24 0 08 Jan 2021
Rethinking Semantic Segmentation from a Sequence-to-Sequence Perspective with Transformers Sixiao Zheng Jiachen Lu Hengshuang Zhao Xiatian Zhu Zekun Luo ... Yanwei Fu Jianfeng Feng Tao Xiang Philip Torr Li Zhang ViT 188 2,897 0 31 Dec 2020
Review: Deep Learning in Electron Microscopy Jeffrey M. Ede 105 80 0 17 Sep 2020
Few-Shot Class-Incremental Learning Xiaoyu Tao Xiaopeng Hong Xinyuan Chang Songlin Dong Xing Wei Yihong Gong CLL 88 409 0 23 Apr 2020
Momentum Contrast for Unsupervised Visual Representation Learning Kaiming He Haoqi Fan Yuxin Wu Saining Xie Ross B. Girshick SSL 179 12,065 0 13 Nov 2019
Understanding Deep Learning Techniques for Image Segmentation Swarnendu Ghosh N. Das Ishita Das U. Maulik SSeg VLM 44 376 0 13 Jul 2019
GASP, a generalized framework for agglomerative clustering of signed graphs and its application to Instance Segmentation Alberto Bailoni Constantin Pape Nathan Hütsch Steffen Wolf T. Beier Anna Kreshuk Fred Hamprecht 53 12 0 27 Jun 2019
Deep Learning for Generic Object Detection: A Survey Li Liu Wanli Ouyang Xiaogang Wang Paul Fieguth Jie Chen Xinwang Liu M. Pietikäinen ObjD VLM OOD 148 2,448 0 06 Sep 2018
Not-so-supervised: a survey of semi-supervised, multi-instance, and transfer learning in medical image analysis Veronika Cheplygina Marleen de Bruijne J. Pluim 47 748 0 17 Apr 2018
One-Shot Learning for Semantic Segmentation Amirreza Shaban Shray Bansal Ziqiang Liu Irfan Essa Byron Boots SSeg VLM 85 704 0 11 Sep 2017
Semantic Instance Segmentation with a Discriminative Loss Function Bert De Brabandere D. Neven Luc Van Gool SSeg 149 444 0 08 Aug 2017
On the Compactness, Efficiency, and Representation of 3D Convolutional Networks: Brain Parcellation as a Pretext Task Wenqi Li Guotai Wang Lucas Fidon Sebastien Ourselin M. Jorge Cardoso Tom Vercauteren 3DV 93 339 0 06 Jul 2017
Rethinking Atrous Convolution for Semantic Image Segmentation Liang-Chieh Chen George Papandreou Florian Schroff Hartwig Adam SSeg 219 8,468 0 17 Jun 2017
Superhuman Accuracy on the SNEMI3D Connectomics Challenge Kisuk Lee J. Zung Peter H. Li Viren Jain H. S. Seung 3DV 54 268 0 31 May 2017
Deep Watershed Transform for Instance Segmentation Min Bai R. Urtasun ISeg SSeg 110 523 0 24 Nov 2016
The Importance of Skip Connections in Biomedical Image Segmentation M. Drozdzal Eugene Vorontsov Gabriel Chartrand Samuel Kadoury C. Pal MedIm 76 1,044 0 14 Aug 2016
SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation Vijay Badrinarayanan Alex Kendall R. Cipolla SSeg 1.0K 15,795 0 02 Nov 2015
Learning Deconvolution Network for Semantic Segmentation Hyeonwoo Noh Seunghoon Hong Bohyung Han SSeg 225 4,173 0 17 May 2015
Delving Deep into Rectifiers: Surpassing Human-Level Performance on ImageNet Classification Kaiming He Xinming Zhang Shaoqing Ren Jian Sun VLM 298 18,587 0 06 Feb 2015
Semantic Image Segmentation with Deep Convolutional Nets and Fully Connected CRFs Liang-Chieh Chen George Papandreou Iasonas Kokkinos Kevin Patrick Murphy Alan Yuille SSeg 164 4,892 0 22 Dec 2014