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Large Language Models are Few-Shot Clinical Information Extractors

Large Language Models are Few-Shot Clinical Information Extractors

25 May 2022
Monica Agrawal
S. Hegselmann
Hunter Lang
Yoon Kim
David Sontag
    BDL
    LM&MA
ArXivPDFHTML

Papers citing "Large Language Models are Few-Shot Clinical Information Extractors"

43 / 43 papers shown
Title
BRIDGE: Benchmarking Large Language Models for Understanding Real-world Clinical Practice Text
BRIDGE: Benchmarking Large Language Models for Understanding Real-world Clinical Practice Text
Jiageng Wu
Bowen Gu
Ren Zhou
Kevin Xie
Doug Snyder
...
Shri Kiran Srinivasan
Jonathan H. Chen
Santiago Romero-Brufau
K. J. Lin
Jie Yang
LM&MA
ELM
92
0
0
28 Apr 2025
Can Frontier LLMs Replace Annotators in Biomedical Text Mining? Analyzing Challenges and Exploring Solutions
Can Frontier LLMs Replace Annotators in Biomedical Text Mining? Analyzing Challenges and Exploring Solutions
Yichong Zhao
Susumu Goto
65
0
0
05 Mar 2025
Entity Decomposition with Filtering: A Zero-Shot Clinical Named Entity Recognition Framework
Entity Decomposition with Filtering: A Zero-Shot Clinical Named Entity Recognition Framework
Reza Averly
Xia Ning
113
1
0
21 Feb 2025
Evaluating Large Language Models for Public Health Classification and Extraction Tasks
Evaluating Large Language Models for Public Health Classification and Extraction Tasks
Joshua Harris
Timothy Laurence
Leo Loman
Fan Grayson
Toby Nonnenmacher
...
Hamish Mohammed
Thomas Finnie
Luke Hounsome
Michael Borowitz
Steven Riley
LM&MA
AI4MH
83
5
0
20 Feb 2025
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics
Kai He
Rui Mao
Qika Lin
Yucheng Ruan
Xiang Lan
Mengling Feng
Erik Cambria
LM&MA
AILaw
93
154
0
28 Jan 2025
Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation with Large Language Models
Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation with Large Language Models
Ran Xu
Hejie Cui
Yue Yu
Xuan Kan
Wenqi Shi
Yuchen Zhuang
Wei Jin
Joyce C. Ho
Carl Yang
69
14
0
28 Jan 2025
Can LLMs be Good Graph Judge for Knowledge Graph Construction?
Can LLMs be Good Graph Judge for Knowledge Graph Construction?
Haoyu Huang
Cheng Chen
Conghui He
Yang Li
Jiawei Jiang
81
1
0
26 Nov 2024
Latent Paraphrasing: Perturbation on Layers Improves Knowledge Injection
  in Language Models
Latent Paraphrasing: Perturbation on Layers Improves Knowledge Injection in Language Models
Minki Kang
Sung Ju Hwang
Gibbeum Lee
Jaewoong Cho
KELM
43
0
0
01 Nov 2024
MedINST: Meta Dataset of Biomedical Instructions
MedINST: Meta Dataset of Biomedical Instructions
Wenhan Han
Meng Fang
Zihan Zhang
Yu Yin
Zirui Song
Ling-Hao Chen
Mykola Pechenizkiy
Qingyu Chen
LM&MA
33
1
0
17 Oct 2024
Knowledge-Driven Feature Selection and Engineering for Genotype Data with Large Language Models
Knowledge-Driven Feature Selection and Engineering for Genotype Data with Large Language Models
Joseph Lee
Shu Yang
Jae Young Baik
Xiaoxi Liu
Zhen Tan
...
Zixuan Wen
Bojian Hou
D. Duong-Tran
Tianlong Chen
Li Shen
46
1
0
02 Oct 2024
GAMedX: Generative AI-based Medical Entity Data Extractor Using Large
  Language Models
GAMedX: Generative AI-based Medical Entity Data Extractor Using Large Language Models
Mohammed-Khalil Ghali
Abdelrahman Farrag
Hajar Sakai
Hicham El Baz
Yu Jin
Sarah Lam
LM&MA
MedIm
40
8
0
31 May 2024
Theoretical Analysis of Weak-to-Strong Generalization
Theoretical Analysis of Weak-to-Strong Generalization
Hunter Lang
David Sontag
Aravindan Vijayaraghavan
25
20
0
25 May 2024
Simplifying Multimodality: Unimodal Approach to Multimodal Challenges in
  Radiology with General-Domain Large Language Model
Simplifying Multimodality: Unimodal Approach to Multimodal Challenges in Radiology with General-Domain Large Language Model
Seonhee Cho
Choonghan Kim
Jiho Lee
Chetan Chilkunda
Sujin Choi
Joo Heung Yoon
53
0
0
29 Apr 2024
Meta In-Context Learning Makes Large Language Models Better Zero and
  Few-Shot Relation Extractors
Meta In-Context Learning Makes Large Language Models Better Zero and Few-Shot Relation Extractors
Guozheng Li
Peng Wang
Jiajun Liu
Yikai Guo
Ke Ji
Ziyu Shang
Zijie Xu
LRM
35
7
0
27 Apr 2024
Extracting Social Determinants of Health from Pediatric Patient Notes
  Using Large Language Models: Novel Corpus and Methods
Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods
Yujuan Fu
Giridhar Kaushik Ramachandran
Nicholas J. Dobbins
Namu Park
Michael Leu
Abby R. Rosenberg
K. Lybarger
Fei Xia
Özlem Uzuner
Meliha Yetisgen
46
5
0
31 Mar 2024
Leveraging ChatGPT in Pharmacovigilance Event Extraction: An Empirical
  Study
Leveraging ChatGPT in Pharmacovigilance Event Extraction: An Empirical Study
ZHAOYUE SUN
Gabriele Pergola
Byron C. Wallace
Yulan He
LM&MA
37
13
0
24 Feb 2024
A comparative study of zero-shot inference with large language models
  and supervised modeling in breast cancer pathology classification
A comparative study of zero-shot inference with large language models and supervised modeling in breast cancer pathology classification
Madhumita Sushil
T. Zack
Divneet Mandair
Zhiwei Zheng
Ahmed Wali
Yan-Ning Yu
Yuwei Quan
A. Butte
33
6
0
25 Jan 2024
Large Language Models as Zero-Shot Keyphrase Extractors: A Preliminary
  Empirical Study
Large Language Models as Zero-Shot Keyphrase Extractors: A Preliminary Empirical Study
Mingyang Song
Xuelian Geng
Songfang Yao
Shilong Lu
Yi Feng
Liping Jing
32
6
0
23 Dec 2023
HyperPIE: Hyperparameter Information Extraction from Scientific
  Publications
HyperPIE: Hyperparameter Information Extraction from Scientific Publications
T. Saier
Mayumi Ohta
Takuto Asakura
Michael Färber
19
4
0
17 Dec 2023
Surpassing GPT-4 Medical Coding with a Two-Stage Approach
Surpassing GPT-4 Medical Coding with a Two-Stage Approach
Zhichao Yang
S. S. Batra
Joel Stremmel
Eran Halperin
ELM
29
5
0
22 Nov 2023
Can Large Language Models Follow Concept Annotation Guidelines? A Case
  Study on Scientific and Financial Domains
Can Large Language Models Follow Concept Annotation Guidelines? A Case Study on Scientific and Financial Domains
Marcio Fonseca
Shay B. Cohen
ALM
24
6
0
15 Nov 2023
CPLLM: Clinical Prediction with Large Language Models
CPLLM: Clinical Prediction with Large Language Models
Ofir Ben Shoham
Nadav Rappoport
LM&MA
34
24
0
20 Sep 2023
Zero-shot Learning with Minimum Instruction to Extract Social
  Determinants and Family History from Clinical Notes using GPT Model
Zero-shot Learning with Minimum Instruction to Extract Social Determinants and Family History from Clinical Notes using GPT Model
Neel Jitesh Bhate
Ansh Mittal
Zhe He
Xiao Luo
29
12
0
11 Sep 2023
AI-Generated Content (AIGC) for Various Data Modalities: A Survey
AI-Generated Content (AIGC) for Various Data Modalities: A Survey
Lin Geng Foo
Hossein Rahmani
Xiaozhong Liu
78
31
0
27 Aug 2023
Mental-LLM: Leveraging Large Language Models for Mental Health
  Prediction via Online Text Data
Mental-LLM: Leveraging Large Language Models for Mental Health Prediction via Online Text Data
Xuhai Xu
Bingsheng Yao
Yu Dong
Saadia Gabriel
Hongfeng Yu
James A. Hendler
Marzyeh Ghassemi
A. Dey
Dakuo Wang
LM&MA
CLL
AI4MH
48
64
0
26 Jul 2023
Coupling Large Language Models with Logic Programming for Robust and
  General Reasoning from Text
Coupling Large Language Models with Logic Programming for Robust and General Reasoning from Text
Zhun Yang
Adam Ishay
Joohyung Lee
LRM
ELM
33
51
0
15 Jul 2023
PULSAR at MEDIQA-Sum 2023: Large Language Models Augmented by Synthetic
  Dialogue Convert Patient Dialogues to Medical Records
PULSAR at MEDIQA-Sum 2023: Large Language Models Augmented by Synthetic Dialogue Convert Patient Dialogues to Medical Records
Viktor Schlegel
Hao Li
Yuping Wu
Anand Subramanian
Thanh-Tung Nguyen
...
Daniel Beck
Xiaojun Zeng
R. Batista-Navarro
Stefan Winkler
Goran Nenadic
LM&MA
MedIm
24
9
0
05 Jul 2023
Identifying and Extracting Rare Disease Phenotypes with Large Language
  Models
Identifying and Extracting Rare Disease Phenotypes with Large Language Models
Cathy Shyr
Yan Hu
P. Harris
Hua Xu
LM&MA
AI4MH
26
24
0
22 Jun 2023
Good Data, Large Data, or No Data? Comparing Three Approaches in
  Developing Research Aspect Classifiers for Biomedical Papers
Good Data, Large Data, or No Data? Comparing Three Approaches in Developing Research Aspect Classifiers for Biomedical Papers
S. Chandrasekhar
Huang Chieh-Yang
Ting-Hao 'Kenneth' Huang
25
2
0
07 Jun 2023
A Survey of Safety and Trustworthiness of Large Language Models through
  the Lens of Verification and Validation
A Survey of Safety and Trustworthiness of Large Language Models through the Lens of Verification and Validation
Xiaowei Huang
Wenjie Ruan
Wei Huang
Gao Jin
Yizhen Dong
...
Sihao Wu
Peipei Xu
Dengyu Wu
André Freitas
Mustafa A. Mustafa
ALM
39
82
0
19 May 2023
Language Models Enable Simple Systems for Generating Structured Views of Heterogeneous Data Lakes
Language Models Enable Simple Systems for Generating Structured Views of Heterogeneous Data Lakes
Simran Arora
Brandon Yang
Sabri Eyuboglu
A. Narayan
Andrew Hojel
Immanuel Trummer
Christopher Ré
SyDa
47
69
0
19 Apr 2023
The Shaky Foundations of Clinical Foundation Models: A Survey of Large
  Language Models and Foundation Models for EMRs
The Shaky Foundations of Clinical Foundation Models: A Survey of Large Language Models and Foundation Models for EMRs
Michael Wornow
Yizhe Xu
Rahul Thapa
Birju S. Patel
E. Steinberg
Scott L. Fleming
M. Pfeffer
Jason Alan Fries
N. Shah
LM&MA
28
32
0
22 Mar 2023
Large Language Models for Biomedical Knowledge Graph Construction:
  Information extraction from EMR notes
Large Language Models for Biomedical Knowledge Graph Construction: Information extraction from EMR notes
Vahan Arsenyan
Spartak Bughdaryan
Fadi Shaya
Kent Small
Davit Shahnazaryan
35
10
0
29 Jan 2023
TabLLM: Few-shot Classification of Tabular Data with Large Language
  Models
TabLLM: Few-shot Classification of Tabular Data with Large Language Models
S. Hegselmann
Alejandro Buendia
Hunter Lang
Monica Agrawal
Xiaoyi Jiang
David Sontag
LMTD
55
211
0
19 Oct 2022
Localization supervision of chest x-ray classifiers using label-specific
  eye-tracking annotation
Localization supervision of chest x-ray classifiers using label-specific eye-tracking annotation
Ricardo Bigolin Lanfredi
Joyce D. Schroeder
Tolga Tasdizen
21
2
0
20 Jul 2022
Instruction Induction: From Few Examples to Natural Language Task
  Descriptions
Instruction Induction: From Few Examples to Natural Language Task Descriptions
Or Honovich
Uri Shaham
Samuel R. Bowman
Omer Levy
ELM
LRM
120
136
0
22 May 2022
What GPT Knows About Who is Who
What GPT Knows About Who is Who
Xiaohan Yang
Eduardo Peynetti
Vasco Meerman
Christy Tanner
136
13
0
16 May 2022
Training language models to follow instructions with human feedback
Training language models to follow instructions with human feedback
Long Ouyang
Jeff Wu
Xu Jiang
Diogo Almeida
Carroll L. Wainwright
...
Amanda Askell
Peter Welinder
Paul Christiano
Jan Leike
Ryan J. Lowe
OSLM
ALM
319
11,953
0
04 Mar 2022
Co-training Improves Prompt-based Learning for Large Language Models
Co-training Improves Prompt-based Learning for Large Language Models
Hunter Lang
Monica Agrawal
Yoon Kim
David Sontag
VLM
LRM
169
39
0
02 Feb 2022
Multitask Prompted Training Enables Zero-Shot Task Generalization
Multitask Prompted Training Enables Zero-Shot Task Generalization
Victor Sanh
Albert Webson
Colin Raffel
Stephen H. Bach
Lintang Sutawika
...
T. Bers
Stella Biderman
Leo Gao
Thomas Wolf
Alexander M. Rush
LRM
213
1,657
0
15 Oct 2021
On Generalization in Coreference Resolution
On Generalization in Coreference Resolution
Shubham Toshniwal
Patrick Xia
Sam Wiseman
Karen Livescu
Kevin Gimpel
118
36
0
20 Sep 2021
Stanza: A Python Natural Language Processing Toolkit for Many Human
  Languages
Stanza: A Python Natural Language Processing Toolkit for Many Human Languages
Peng Qi
Yuhao Zhang
Yuhui Zhang
Jason Bolton
Christopher D. Manning
AI4TS
213
1,654
0
16 Mar 2020
Exploiting Cloze Questions for Few Shot Text Classification and Natural
  Language Inference
Exploiting Cloze Questions for Few Shot Text Classification and Natural Language Inference
Timo Schick
Hinrich Schütze
258
1,589
0
21 Jan 2020
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