A Variational Approach to Bayesian Phylogenetic Inference

A Variational Approach to Bayesian Phylogenetic Inference

16 April 2022

Cheng Zhang

IV FrederickA.Matsen

Papers citing "A Variational Approach to Bayesian Phylogenetic Inference"

10 / 10 papers shown

Title
Variational Bayesian Phylogenetic Inference with Semi-implicit Branch Length Distributions Tianyu Xie Frederick A. Matsen IV M. Suchard Cheng Zhang 25 1 0 09 Aug 2024
Torchtree: flexible phylogenetic model development and inference using PyTorch Mathieu Fourment Matthew Macaulay Christiaan J. Swanepoel Xiang Ji M. Suchard Frederick A Matsen IV BDL 29 0 0 26 Jun 2024
Efficient Mixture Learning in Black-Box Variational Inference A. Hotti Oskar Kviman Ricky Molén Victor Elvira Jens Lagergren 41 1 0 11 Jun 2024
Leveraging graphical model techniques to study evolution on phylogenetic networks Benjamin Teo P. Bastide Cécile Ané 27 1 0 15 May 2024
ARTree: A Deep Autoregressive Model for Phylogenetic Inference Tianyu Xie Cheng Zhang 20 4 0 14 Oct 2023
Improved Variational Bayesian Phylogenetic Inference using Mixtures Oskar Kviman Ricky Molén Jens Lagergren 20 5 0 02 Oct 2023
Learnable Topological Features for Phylogenetic Inference via Graph Neural Networks Cheng Zhang 15 14 0 17 Feb 2023
Prior Density Learning in Variational Bayesian Phylogenetic Parameters Inference Amine M. Remita Golrokh Vitae Abdoulaye Baniré Diallo BDL 16 0 0 06 Feb 2023
TreeFlow: probabilistic programming and automatic differentiation for phylogenetics Christiaan J. Swanepoel Mathieu Fourment Xiang Ji Hassan Nasif M. Suchard IV FrederickAMatsen A. Drummond AI4CE 8 3 0 09 Nov 2022
MCMC using Hamiltonian dynamics Radford M. Neal 185 3,266 0 09 Jun 2012