AlphaDesign: A graph protein design method and benchmark on AlphaFoldDB

AlphaDesign: A graph protein design method and benchmark on AlphaFoldDB

1 February 2022

Cheng Tan

Stan Z. Li

Papers citing "AlphaDesign: A graph protein design method and benchmark on AlphaFoldDB"

9 / 9 papers shown

Title
UniIF: Unified Molecule Inverse Folding Zhangyang Gao Jue Wang Cheng Tan Lirong Wu Yufei Huang Siyuan Li Zhirui Ye Stan Z. Li 37 4 0 29 May 2024
A Survey of Geometric Graph Neural Networks: Data Structures, Models and Applications Jiaqi Han Jiacheng Cen Liming Wu Zongzhao Li Xiangzhe Kong ... Zhewei Wei Deli Zhao Yu Rong Wenbing Huang Wenbing Huang AI4CE 34 20 0 01 Mar 2024
Knowledge-Design: Pushing the Limit of Protein Design via Knowledge Refinement Zhangyang Gao Cheng Tan Stan Z. Li 27 15 0 20 May 2023
Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer Cheng Tan Zhangyang Gao Lirong Wu Jun-Xiong Xia Jiangbin Zheng Xihong Yang Yue Liu Bozhen Hu Stan Z. Li 34 14 0 21 Apr 2023
Hard Sample Aware Network for Contrastive Deep Graph Clustering Yue Liu Xihong Yang Sihang Zhou Xinwang Liu Zhen Wang K. Liang Wenxuan Tu Liangjun Li Jingcan Duan Cancan Chen 33 101 0 16 Dec 2022
DiffBP: Generative Diffusion of 3D Molecules for Target Protein Binding Haitao Lin Yufei Huang Odin Zhang Siqi Ma Meng Liu X. Li Lirong Wu Shuiwang Ji Tingjun Hou Stan Z. Li DiffM 26 60 0 21 Nov 2022
PiFold: Toward effective and efficient protein inverse folding Zhangyang Gao Cheng Tan Pablo Chacón Stan Z. Li AI4CE 67 104 0 22 Sep 2022
Temporal Attention Unit: Towards Efficient Spatiotemporal Predictive Learning Cheng Tan Zhangyang Gao Lirong Wu Yongjie Xu Jun-Xiong Xia Siyuan Li Stan Z. Li 43 107 0 24 Jun 2022
Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabilistic Models N. Anand Tudor Achim DiffM 187 173 0 26 May 2022