BERT might be Overkill: A Tiny but Effective Biomedical Entity Linker
based on Residual Convolutional Neural Networks

BERT might be Overkill: A Tiny but Effective Biomedical Entity Linker based on Residual Convolutional Neural Networks

6 September 2021

Heng Ji

ChengXiang Zhai

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Papers citing "BERT might be Overkill: A Tiny but Effective Biomedical Entity Linker based on Residual Convolutional Neural Networks"

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Title
Learning from Negative Samples in Generative Biomedical Entity Linking Chanhwi Kim Hyunjae Kim Sihyeon Park Jiwoo Lee Mujeen Sung Jaewoo Kang MedIm 72 0 0 29 Aug 2024
Biomedical Entity Linking as Multiple Choice Question Answering Zhenxi Lin Ziheng Zhang Xian Wu Yefeng Zheng 70 2 0 23 Feb 2024
BELHD: Improving Biomedical Entity Linking with Homonoym Disambiguation Samuele Garda Ulf Leser 105 2 0 10 Jan 2024
Improving Biomedical Entity Linking with Retrieval-enhanced Learning Zhenxi Lin Ziheng Zhang Xian Wu Yefeng Zheng 62 2 0 15 Dec 2023
Biomedical Entity Linking with Triple-aware Pre-Training Xiongliang Yan Cedric Moller Ricardo Usbeck AI4CE 61 3 0 28 Aug 2023
BELB: a Biomedical Entity Linking Benchmark Samuele Garda Leon Weber-Genzel Robert Martin Ulf Leser 52 6 0 22 Aug 2023
Exploring Partial Knowledge Base Inference in Biomedical Entity Linking Hongyi Yuan Keming Lu Zheng Yuan 48 3 0 18 Mar 2023
Knowledge Injected Prompt Based Fine-tuning for Multi-label Few-shot ICD Coding Zhichao Yang Shufan Wang Bhanu Pratap Singh Rawat Avijit Mitra Hong-ye Yu 174 55 0 07 Oct 2022
Detection, Disambiguation, Re-ranking: Autoregressive Entity Linking as a Multi-Task Problem Khalil Mrini Shaoliang Nie Jiatao Gu Sinong Wang Maziar Sanjabi Hamed Firooz 79 19 0 12 Apr 2022
Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning Hongyi Yuan Zheng Yuan Sheng Yu MedIm 60 45 0 11 Apr 2022
BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model Hongyi Yuan Zheng Yuan Ruyi Gan Jiaxing Zhang Yutao Xie Sheng Yu LM&MA 88 132 0 08 Apr 2022
Improving Candidate Retrieval with Entity Profile Generation for Wikidata Entity Linking T. Lai Heng Ji ChengXiang Zhai RALM 79 12 0 27 Feb 2022
Knowledge-Rich Self-Supervision for Biomedical Entity Linking Sheng Zhang Hao Cheng Shikhar Vashishth Cliff Wong Jinfeng Xiao Xiaodong Liu Tristan Naumann Jianfeng Gao Hoifung Poon 86 42 0 15 Dec 2021
End-to-end Neural Coreference Resolution Revisited: A Simple yet Effective Baseline T. Lai Trung Bui Doo Soon Kim 57 12 0 04 Jul 2021
Multi-Task Attentive Residual Networks for Argument Mining Andrea Galassi Marco Lippi Paolo Torroni HAI 61 24 0 24 Feb 2021