UNETR: Transformers for 3D Medical Image Segmentation

18 March 2021

Andriy Myronenko

Papers citing "UNETR: Transformers for 3D Medical Image Segmentation"

50 / 589 papers shown

Title
SSL^2: Self-Supervised Learning meets Semi-Supervised Learning: Multiple Sclerosis Segmentation in 7T-MRI from large-scale 3T-MRI Jiacheng Wang Hao Li Han Liu Dewei Hu Daiwei Lu K. Yoon Kelsey M. Barter F. Bagnato I. Oguz 26 2 0 09 Mar 2023
UT-Net: Combining U-Net and Transformer for Joint Optic Disc and Cup Segmentation and Glaucoma Detection Rukhshanda Hussain Hritam Basak ViT MedIm 30 7 0 08 Mar 2023
MetaMorph: Learning Metamorphic Image Transformation With Appearance Changes Jian Wang Jiarui Xing Jason Druzgal W. Wells Miaomiao Zhang MedIm 36 4 0 08 Mar 2023
Automated Peripancreatic Vessel Segmentation and Labeling Based on Iterative Trunk Growth and Weakly Supervised Mechanism Liwen Zou Z. Cai L. Mao Ziwei Nie Y. Qiu Xiaoping Yang 16 3 0 06 Mar 2023
CTG-Net: An Efficient Cascaded Framework Driven by Terminal Guidance Mechanism for Dilated Pancreatic Duct Segmentation Liwen Zou Zhen-zhai Cai Y. Qiu Luying Gui L. Mao Xiaoping Yang MedIm 30 6 0 06 Mar 2023
Towards more precise automatic analysis: a comprehensive survey of deep learning-based multi-organ segmentation Xiaoyu Liu Linhao Qu Ziyue Xie Jiayue Zhao Yonghong Shi Zhijian Song 29 7 0 01 Mar 2023
Deep Learning-based Multi-Organ CT Segmentation with Adversarial Data Augmentation Shaoyan Pan Shao-Yuan Lo M. Huang Chaoqiong Ma Jacob F. Wynne Tonghe Wang Tian Liu Xiaofeng Yang OOD MedIm 32 3 0 25 Feb 2023
Anatomical Invariance Modeling and Semantic Alignment for Self-supervised Learning in 3D Medical Image Analysis Yankai Jiang Ming Sun Heng Guo Xiaoyu Bai K. Yan Le Lu Minfeng Xu MedIm 29 20 0 11 Feb 2023
Tackling Bias in the Dice Similarity Coefficient: Introducing nDSC for White Matter Lesion Segmentation Vatsal Raina N. Molchanova Mara Graziani A. Malinin Henning Muller Meritxell Bach Cuadra Mark J. F. Gales 24 9 0 10 Feb 2023
DOMINO: Domain-aware Loss for Deep Learning Calibration Skylar E. Stolte Kyle Volle A. Indahlastari Alejandro Albizu A. Woods Kevin Brink Matthew Hale R. Fang MedIm 13 1 0 10 Feb 2023
Adapting Pre-trained Vision Transformers from 2D to 3D through Weight Inflation Improves Medical Image Segmentation Yuhui Zhang Shihua Huang Zhengping Zhou M. Lungren Serena Yeung ViT MedIm 8 8 0 08 Feb 2023
SwinCross: Cross-modal Swin Transformer for Head-and-Neck Tumor Segmentation in PET/CT Images Gary Y. Li Junyu Chen Se-In Jang Kuang Gong Quanzheng Li ViT MedIm 46 14 0 08 Feb 2023
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge Coen de Vente Koen A. Vermeer Nicolas Jaccard He Wang Hongyi Sun ... Abdul Qayyum Imran Razzak Bram van Ginneken H. Lemij Clara I. Sánchez 26 56 0 03 Feb 2023
Rethinking Semi-Supervised Medical Image Segmentation: A Variance-Reduction Perspective Chenyu You Weicheng Dai Yifei Min Fenglin Liu David A. Clifton S. Kevin Zhou Lawrence H. Staib James S Duncan 23 69 0 03 Feb 2023
6-DoF Robotic Grasping with Transformer Zhenjie Zhao Han Yu Hang Wu Xuebo Zhang ViT 30 0 0 29 Jan 2023
TranSOP: Transformer-based Multimodal Classification for Stroke Treatment Outcome Prediction Zeynel A. Samak Philip Clatworthy Majid Mirmehdi 32 6 0 25 Jan 2023
MedSegDiff-V2: Diffusion based Medical Image Segmentation with Transformer Junde Wu Rao Fu Huihui Fang Min Xu Yu Zhang Yanwu Xu DiffM MedIm 43 159 0 19 Jan 2023
Model-based inexact graph matching on top of CNNs for semantic scene understanding Jérémy Chopin Jean-Baptiste Fasquel Harold Mouchère Rozenn Dahyot Isabelle Bloch 29 6 0 18 Jan 2023
Acute ischemic stroke lesion segmentation in non-contrast CT images using 3D convolutional neural networks A. Dobshik S. Verbitskiy I. Pestunov K. Sherman Yuriy Sinyavskiy A. Tulupov V. Berikov 26 6 0 17 Jan 2023
Biomedical Image Reconstruction: A Survey Samuel Cahyawijaya 16 1 0 04 Jan 2023
CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection Jie Liu Yixiao Zhang Jieneng Chen Junfei Xiao Yongyi Lu Bennett A. Landman Yixuan Yuan Alan Yuille Yucheng Tang Zongwei Zhou VLM MedIm 39 194 0 02 Jan 2023
Swin MAE: Masked Autoencoders for Small Datasets Zián Xu Yin Dai Fayu Liu Weibin Chen Yue Liu Li-Li Shi Sheng Liu Yuhang Zhou SyDa MedIm ViT 36 28 0 28 Dec 2022
Investigation of Network Architecture for Multimodal Head-and-Neck Tumor Segmentation Ye Li Junyu Chen Se-In Jang Kuang Gong Quanzheng Li ViT MedIm 21 1 0 21 Dec 2022
Mixed Supervision of Histopathology Improves Prostate Cancer Classification from MRI Abhejit Rajagopal A. Westphalen Nathan Velarde Tim Ullrich J. Simko Hao Nguyen T. Hope P. Larson Kirti Magudia 24 3 0 13 Dec 2022
UNETR++: Delving into Efficient and Accurate 3D Medical Image Segmentation Abdelrahman M. Shaker Muhammad Maaz H. Rasheed Salman Khan Ming Yang F. Khan MedIm 40 129 0 08 Dec 2022
MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality Microscopy Gihun Lee Sangmook Kim Joonkee Kim Se-Young Yun MedIm 19 18 0 07 Dec 2022
Solving the Weather4cast Challenge via Visual Transformers for 3D Images Yury Belousov Sergey Polezhaev Brian Pulfer 15 3 0 05 Dec 2022
Joint Self-Supervised Image-Volume Representation Learning with Intra-Inter Contrastive Clustering D. M. Nguyen Hoangvu Nguyen M. T. N. Truong T. Cao Binh Duc Nguyen Nhat Ho Paul Swoboda Shadi Albarqouni P. Xie Daniel Sonntag SSL 24 21 0 04 Dec 2022
Medical Image Segmentation Review: The success of U-Net Reza Azad Ehsan Khodapanah Aghdam Amelie Rauland Yiwei Jia Atlas Haddadi Avval Afshin Bozorgpour Sanaz Karimijafarbigloo Joseph Paul Cohen Ehsan Adeli Dorit Merhof SSeg 22 265 0 27 Nov 2022
DoubleU-NetPlus: A Novel Attention and Context Guided Dual U-Net with Multi-Scale Residual Feature Fusion Network for Semantic Segmentation of Medical Images Md. Rayhan Ahmed Adnan Ferdous Ashrafi R. Ahmed Swakkhar Shatabda A. Muzahidul Islam Salekul Islam SSeg 35 20 0 25 Nov 2022
Open-Source Skull Reconstruction with MONAI Jianning Li André Ferreira B. Puladi Victor Alves Michael Kamp Moon S. Kim F. Nensa Jens Kleesiek Seyed-Ahmad Ahmadi Jan Egger 24 1 0 25 Nov 2022
SPCXR: Self-supervised Pretraining using Chest X-rays Towards a Domain Specific Foundation Model Syed Muhammad Anwar Abhijeet Parida Sara Atito Muhammad Awais G. Nino Josef Kitler M. Linguraru ViT SSL OOD 29 6 0 23 Nov 2022
Joint nnU-Net and Radiomics Approaches for Segmentation and Prognosis of Head and Neck Cancers with PET/CT images Hui Xu Yi-hong Li Wei Zhao G. Quellec Lijun Lu M. Hatt 16 3 0 18 Nov 2022
Vision Transformers in Medical Imaging: A Review Emerald U. Henry Onyeka Emebob C. Omonhinmin ViT MedIm 27 34 0 18 Nov 2022
Prompt Tuning for Parameter-efficient Medical Image Segmentation Marc Fischer Alexander Bartler Bin Yang SSeg 22 18 0 16 Nov 2022
SWIN-SFTNet : Spatial Feature Expansion and Aggregation using Swin Transformer For Whole Breast micro-mass segmentation Sharif Amit Kamran Khondker Fariha Hossain Alireza Tavakkoli G. Bebis Salah A. Baker ViT 19 4 0 16 Nov 2022
ConvFormer: Combining CNN and Transformer for Medical Image Segmentation Pengfei Gu Yejia Zhang Chaoli Wang Da Chen ViT MedIm 16 11 0 15 Nov 2022
WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT X. Hua Z. Du Hongjian Yu Ji-Xian Ma Fanjun Zheng Cheng Zhang Qiao-Ling Lu H Zhao MedIm 13 1 0 14 Nov 2022
Harmonizing output imbalance for defect segmentation on extremely-imbalanced photovoltaic module cells images Jianye Yi Xiaopin Zhong Weixiang Liu Zongze Wu Yuanlong Deng Zhengguang Wu 34 0 0 10 Nov 2022
ImageCAS: A Large-Scale Dataset and Benchmark for Coronary Artery Segmentation based on Computed Tomography Angiography Images An Zeng Chunbiao Wu Meiping Huang Jian Zhuang Shanshan Bi ... Tianchen Wang Yiyu Shi Xiaomeng Li Guisen Lin Xiaowei Xu 20 58 0 03 Nov 2022
IB-U-Nets: Improving medical image segmentation tasks with 3D Inductive Biased kernels Shrajan Bhandary Z. Babaiee D. Kostyszyn T. Fechter C. Zamboglou Anca-Ligia Grosu Radu Grosu 32 1 0 28 Oct 2022
UNet-2022: Exploring Dynamics in Non-isomorphic Architecture Jiansen Guo Hong-Yu Zhou Liansheng Wang Yizhou Yu 37 29 0 27 Oct 2022
Super-Resolution Based Patch-Free 3D Image Segmentation with High-Frequency Guidance Hongyi Wang Lanfen Lin Hongjie Hu Qingqing Chen Yinhao Li Yutaro Iwamoto X. Han Yen-Wei Chen Ruofeng Tong 3DV 33 0 0 26 Oct 2022
Progressively refined deep joint registration segmentation (ProRSeg) of gastrointestinal organs at risk: Application to MRI and cone-beam CT Jue Jiang Jun Hong K. Tringale M. Reyngold C. Crane N. Tyagi Harini Veeraraghavan 22 2 0 25 Oct 2022
Delving into Masked Autoencoders for Multi-Label Thorax Disease Classification Junfei Xiao Yutong Bai Alan Yuille Zongwei Zhou MedIm ViT 37 59 0 23 Oct 2022
Diversity-Promoting Ensemble for Medical Image Segmentation Mariana-Iuliana Georgescu Radu Tudor Ionescu A. Miron 32 19 0 22 Oct 2022
Adversarial Transformer for Repairing Human Airway Segmentation Zeyu Tang Nan Yang Simon Walsh Guang Yang ViT MedIm 16 13 0 21 Oct 2022
SSiT: Saliency-guided Self-supervised Image Transformer for Diabetic Retinopathy Grading Yijin Huang Junyan Lyu Pujin Cheng Roger Tam Xiaoying Tang ViT MedIm 19 20 0 20 Oct 2022
Adaptive Contrastive Learning with Dynamic Correlation for Multi-Phase Organ Segmentation Ho Hin Lee Yucheng Tang Han Liu Yubo Fan L. Cai Qi Yang Xin Yu Shunxing Bao Yuankai Huo Bennett A. Landman 32 1 0 16 Oct 2022
Optimizing Vision Transformers for Medical Image Segmentation Qianying Liu Chaitanya Kaul Jun Wang Christos Anagnostopoulos Roderick Murray-Smith F. Deligianni ViT MedIm 19 19 0 14 Oct 2022