Multiple Instance Captioning: Learning Representations from Histopathology Textbooks and Articles

8 March 2021

Papers citing "Multiple Instance Captioning: Learning Representations from Histopathology Textbooks and Articles"

40 / 40 papers shown

Title
Generative Models in Computational Pathology: A Comprehensive Survey on Methods, Applications, and Challenges Yuan Zhang Xinfeng Zhang Xiaoming Qi Xinyu Wu Feng Chen Guanyu Yang Huazhu Fu MedIm LM&MA AI4CE 22 0 0 16 May 2025
Patho-R1: A Multimodal Reinforcement Learning-Based Pathology Expert Reasoner Wenchuan Zhang Penghao Zhang Jingru Guo Tao Cheng Jie Chen Shuwan Zhang Zhang Zhang Yuhao Yi Hong Bu AI4TS LRM 17 0 0 16 May 2025
BiomedCLIP: a multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairs Sheng Zhang Yanbo Xu Naoto Usuyama Hanwen Xu J. Bagga ... Carlo Bifulco M. Lungren Tristan Naumann Sheng Wang Hoifung Poon LM&MA MedIm 154 205 0 10 Jan 2025
Aligning Knowledge Concepts to Whole Slide Images for Precise Histopathology Image Analysis Weiqin Zhao Ziyu Guo Yinshuang Fan Yuming Jiang Maximus C. F. Yeung Lequan Yu 76 3 0 27 Nov 2024
Path-RAG: Knowledge-Guided Key Region Retrieval for Open-ended Pathology Visual Question Answering Awais Naeem Tianhao Li Huang-Ru Liao Jiawei Xu Aby M. Mathew ... A. Jaiswal Raffi A. Salibian Ziniu Hu Tianlong Chen Ying Ding 75 0 0 26 Nov 2024
A New Era in Computational Pathology: A Survey on Foundation and Vision-Language Models Dibaloke Chanda Milan Aryal Nasim Yahya Soltani Masoud Ganji AI4CE VLM 44 7 0 23 Aug 2024
Has Multimodal Learning Delivered Universal Intelligence in Healthcare? A Comprehensive Survey Qika Lin Yifan Zhu Xin Mei Ling Huang Jingying Ma Kai He Zhen Peng Min Zhang Mengling Feng 42 18 0 23 Aug 2024
Multistain Pretraining for Slide Representation Learning in Pathology Guillaume Jaume Anurag J. Vaidya Andrew Zhang Andrew H. Song Richard J. Chen S. Sahai Dandan Mo Emilio Madrigal L. Le Faisal Mahmood 33 12 0 05 Aug 2024
Leveraging image captions for selective whole slide image annotation Jingna Qiu Marc Aubreville Frauke Wilm Mathias Öttl Jonas Utz M. Schlereth Katharina Breininger 34 0 0 08 Jul 2024
WSI-VQA: Interpreting Whole Slide Images by Generative Visual Question Answering Pingyi Chen Chenglu Zhu Sunyi Zheng Honglin Li Lin Yang 49 7 0 08 Jul 2024
PathAlign: A vision-language model for whole slide images in histopathology Faruk Ahmed Andrew Sellergren Lin Yang Shawn Xu Boris Babenko ... S. Shetty Daniel Golden Yun-Hui Liu David F. Steiner Ellery Wulczyn LM&MA VLM 36 15 0 27 Jun 2024
HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Guillaume Jaume Paul Doucet Andrew H. Song Ming Y. Lu Cristina Almagro-Pérez ... Anurag J. Vaidya Richard J. Chen Drew F. K. Williamson Ahrong Kim Faisal Mahmood 49 29 0 23 Jun 2024
STimage-1K4M: A histopathology image-gene expression dataset for spatial transcriptomics Jiawen Chen Muqing Zhou Wenrong Wu Jinwei Zhang Yun Li Didong Li 38 6 0 10 Jun 2024
CPLIP: Zero-Shot Learning for Histopathology with Comprehensive Vision-Language Alignment Sajid Javed Arif Mahmood I. I. Ganapathi Fayaz Ali Dharejo Naoufel Werghi Mohammed Bennamoun VLM LM&MA 45 12 0 07 Jun 2024
PRISM: A Multi-Modal Generative Foundation Model for Slide-Level Histopathology George Shaikovski Adam Casson Kristen Severson Eric Zimmermann Yi Kan Wang ... Peter Hamilton William A. Moye Eugene Vorontsov Siqi Liu Thomas J. Fuchs MedIm 40 24 0 16 May 2024
Multi-Scale Heterogeneity-Aware Hypergraph Representation for Histopathology Whole Slide Images Minghao Han Xukun Zhang Dingkang Yang Tao Liu Haopeng Kuang Jinghui Feng Lihua Zhang 35 1 0 30 Apr 2024
Knowledge-enhanced Visual-Language Pretraining for Computational Pathology Xiao Zhou Xiaoman Zhang Chaoyi Wu Ya Zhang Weidi Xie Yanfeng Wang VLM 35 7 0 15 Apr 2024
Hierarchical Text-to-Vision Self Supervised Alignment for Improved Histopathology Representation Learning Hasindri Watawana Kanchana Ranasinghe Tariq Mahmood Muzammal Naseer Salman Khan Fahad Shahbaz Khan SSL 43 4 0 21 Mar 2024
PathM3: A Multimodal Multi-Task Multiple Instance Learning Framework for Whole Slide Image Classification and Captioning Qifeng Zhou Wenliang Zhong Yuzhi Guo Michael Xiao Hehuan Ma Junzhou Huang 46 10 0 13 Mar 2024
HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Interaction Zhengrui Guo Jiabo Ma Ying Xu Yihui Wang Liansheng Wang Hao Chen 50 18 0 08 Mar 2024
Data-Centric Foundation Models in Computational Healthcare: A Survey Yunkun Zhang Jin Gao Zheling Tan Lingfeng Zhou Kexin Ding Mu Zhou Shaoting Zhang Dequan Wang AI4CE 39 22 0 04 Jan 2024
A Foundational Multimodal Vision Language AI Assistant for Human Pathology Ming Y. Lu Bowen Chen Drew F. K. Williamson Richard J. Chen Kenji Ikamura ... Ivy Liang L. Le Tong Ding Anil V. Parwani Faisal Mahmood MedIm LM&MA 26 20 0 13 Dec 2023
NearbyPatchCL: Leveraging Nearby Patches for Self-Supervised Patch-Level Multi-Class Classification in Whole-Slide Images Gia-Bao Le Van-Tien Nguyen Trung-Truc Huynh-Le Minh-Triet Tran 24 0 0 12 Dec 2023
Medical Vision Language Pretraining: A survey Prashant Shrestha Sanskar Amgain Bidur Khanal Cristian A. Linte Binod Bhattarai VLM 34 14 0 11 Dec 2023
WsiCaption: Multiple Instance Generation of Pathology Reports for Gigapixel Whole-Slide Images Pingyi Chen Honglin Li Chenglu Zhu Sunyi Zheng Zhongyi Shui Lin Yang 23 6 0 27 Nov 2023
Automatic Report Generation for Histopathology images using pre-trained Vision Transformers S. Sengupta Donald E. Brown VLM MedIm ViT 26 9 0 10 Nov 2023
What a Whole Slide Image Can Tell? Subtype-guided Masked Transformer for Pathological Image Captioning Wenkang Qin Rui Xu Peixiang Huang Xiaomin Wu Heyu Zhang Lin Luo 22 8 0 31 Oct 2023
Towards a Visual-Language Foundation Model for Computational Pathology Ming Y. Lu Bowen Chen Drew F. K. Williamson Richard J. Chen Ivy Liang ... Andrew Zhang L. Le Georg Gerber Anil V. Parwani Faisal Mahmood VLM MedIm 40 46 0 24 Jul 2023
Divert More Attention to Vision-Language Object Tracking Mingzhe Guo Zhipeng Zhang Li Jing Haibin Ling Heng Fan VLM 42 3 0 19 Jul 2023
A scoping review on multimodal deep learning in biomedical images and texts Zhaoyi Sun Mingquan Lin Qingqing Zhu Qianqian Xie Fei Wang Zhiyong Lu Yifan Peng 31 18 0 14 Jul 2023
Masked conditional variational autoencoders for chromosome straightening Jingxiong Li S. Zheng Zhongyi Shui Shichuan Zhang Lin Yang ... Honglin Li Y. Ye P. V. van Ooijen Kang Li Lin Yang CML 16 2 0 25 Jun 2023
Quilt-1M: One Million Image-Text Pairs for Histopathology Wisdom O. Ikezogwo M. S. Seyfioglu Fatemeh Ghezloo Dylan Stefan Chan Geva Fatwir Sheikh Mohammed Pavan Kumar Anand Ranjay Krishna Linda G. Shapiro CLIP VLM 139 114 0 20 Jun 2023
Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images Ming Y. Lu Bowen Chen Andrew Zhang Drew F. K. Williamson Richard J. Chen Tong Ding L. Le Yung-Sung Chuang Faisal Mahmood VLM MedIm 27 100 0 13 Jun 2023
AMIGO: Sparse Multi-Modal Graph Transformer with Shared-Context Processing for Representation Learning of Giga-pixel Images Ramin Nakhli Puria Azadi Moghadam Haoyang Mi H. Farahani Alexander S. Baras B. Gilks A. Bashashati MedIm ViT 32 17 0 01 Mar 2023
Multimodal Learning with Transformers: A Survey P. Xu Xiatian Zhu David A. Clifton ViT 72 527 0 13 Jun 2022
LILE: Look In-Depth before Looking Elsewhere -- A Dual Attention Network using Transformers for Cross-Modal Information Retrieval in Histopathology Archives Danial Maleki H. R Tizhoosh MedIm 12 10 0 02 Mar 2022
One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification S. Graham Q. Vu Mostafa Jahanifar Shan E Ahmed Raza F. Minhas David R. J. Snead Nasir M. Rajpoot MedIm 32 28 0 28 Feb 2022
Inference of captions from histopathological patches M. Tsuneki F. Kanavati 16 31 0 07 Feb 2022
Self-Supervised Representation Learning using Visual Field Expansion on Digital Pathology Joseph Boyd Mykola Liashuha Eric Deutsch Nikos Paragios Stergios Christodoulidis Maria Vakalopoulou MedIm 14 35 0 07 Sep 2021
Scaling Laws for Neural Language Models Jared Kaplan Sam McCandlish T. Henighan Tom B. Brown B. Chess R. Child Scott Gray Alec Radford Jeff Wu Dario Amodei 264 4,489 0 23 Jan 2020