Cross-Modality Protein Embedding for Compound-Protein Affinity and Contact Prediction

14 November 2020

Papers citing "Cross-Modality Protein Embedding for Compound-Protein Affinity and Contact Prediction"

10 / 10 papers shown

Title
Towards Deeper Graph Neural Networks Meng Liu Hongyang Gao Shuiwang Ji GNN AI4CE 106 608 0 18 Jul 2020
L $^2$ -GCN: Layer-Wise and Learned Efficient Training of Graph Convolutional Networks Yuning You Tianlong Chen Zhangyang Wang Yang Shen GNN 163 82 0 30 Mar 2020
Explainable Deep Relational Networks for Predicting Compound-Protein Affinities and Contacts Mostafa Karimi Di Wu Zhangyang Wang Yang Shen 84 46 0 29 Dec 2019
Energy-based Graph Convolutional Networks for Scoring Protein Docking Models Yue Cao Yang Shen 45 45 0 28 Dec 2019
LXMERT: Learning Cross-Modality Encoder Representations from Transformers Hao Hao Tan Joey Tianyi Zhou VLM MLLM 252 2,488 0 20 Aug 2019
How Powerful are Graph Neural Networks? Keyulu Xu Weihua Hu J. Leskovec Stefanie Jegelka GNN 257 7,695 0 01 Oct 2018
DeepAffinity: Interpretable Deep Learning of Compound-Protein Affinity through Unified Recurrent and Convolutional Neural Networks Mostafa Karimi Di Wu Zhangyang Wang Yang Shen 77 361 0 20 Jun 2018
DeepDTA: Deep Drug-Target Binding Affinity Prediction Hakime Öztürk E. Olmez Arzucan Özgür 104 1,078 0 30 Jan 2018
Atomic Convolutional Networks for Predicting Protein-Ligand Binding Affinity Joseph Gomes Bharath Ramsundar Evan N. Feinberg Vijay S. Pande 60 193 0 30 Mar 2017
Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model Sheng Wang S. Sun Zerui Li Renyu Zhang Jinbo Xu 61 822 0 02 Sep 2016