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Energy-based models for atomic-resolution protein conformations

Energy-based models for atomic-resolution protein conformations

27 April 2020
Yilun Du
Joshua Meier
Jerry Ma
Rob Fergus
Alexander Rives
ArXivPDFHTML

Papers citing "Energy-based models for atomic-resolution protein conformations"

8 / 8 papers shown
Title
Protein Structure and Sequence Generation with Equivariant Denoising
  Diffusion Probabilistic Models
Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabilistic Models
N. Anand
Tudor Achim
DiffM
196
173
0
26 May 2022
A Tale of Two Flows: Cooperative Learning of Langevin Flow and
  Normalizing Flow Toward Energy-Based Model
A Tale of Two Flows: Cooperative Learning of Langevin Flow and Normalizing Flow Toward Energy-Based Model
Jianwen Xie
Y. Zhu
Juntao Li
Ping Li
24
50
0
13 May 2022
Deep Generative Modeling for Protein Design
Deep Generative Modeling for Protein Design
Alexey Strokach
Philip M. Kim
AI4CE
179
90
0
31 Aug 2021
Directly Training Joint Energy-Based Models for Conditional Synthesis
  and Calibrated Prediction of Multi-Attribute Data
Directly Training Joint Energy-Based Models for Conditional Synthesis and Calibrated Prediction of Multi-Attribute Data
Jacob Kelly
R. Zemel
Will Grathwohl
41
2
0
19 Jul 2021
Improved Contrastive Divergence Training of Energy Based Models
Improved Contrastive Divergence Training of Energy Based Models
Yilun Du
Shuang Li
J. Tenenbaum
Igor Mordatch
41
139
0
02 Dec 2020
Rethinking Attention with Performers
Rethinking Attention with Performers
K. Choromanski
Valerii Likhosherstov
David Dohan
Xingyou Song
Andreea Gane
...
Afroz Mohiuddin
Lukasz Kaiser
David Belanger
Lucy J. Colwell
Adrian Weller
57
1,522
0
30 Sep 2020
Deep Learning in Protein Structural Modeling and Design
Deep Learning in Protein Structural Modeling and Design
Wenhao Gao
S. Mahajan
Jeremias Sulam
Jeffrey J. Gray
29
159
0
16 Jul 2020
Masked Language Modeling for Proteins via Linearly Scalable Long-Context
  Transformers
Masked Language Modeling for Proteins via Linearly Scalable Long-Context Transformers
K. Choromanski
Valerii Likhosherstov
David Dohan
Xingyou Song
Andreea Gane
...
Peter Hawkins
Jared Davis
David Belanger
Lucy J. Colwell
Adrian Weller
39
84
0
05 Jun 2020
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