Pre-Training of Deep Bidirectional Protein Sequence Representations with Structural Information

25 November 2019

Papers citing "Pre-Training of Deep Bidirectional Protein Sequence Representations with Structural Information"

7 / 7 papers shown

Title
Comprehensive benchmarking of large language models for RNA secondary structure prediction L. I. Zablocki L. A. Bugnon M. Gerard L. Di Persia G. Stegmayer D. H. Milone AI4TS 31 3 0 21 Oct 2024
Structure-informed Language Models Are Protein Designers Zaixiang Zheng Yifan Deng Dongyu Xue Yi Zhou YE Fei Quanquan Gu 42 87 0 03 Feb 2023
A Survey on Protein Representation Learning: Retrospect and Prospect Lirong Wu Yu-Feng Huang H. Lin Stan Z. Li AI4TS 38 12 0 31 Dec 2022
Contrastive Representation Learning for 3D Protein Structures Pedro Hermosilla Timo Ropinski 3DV 51 51 0 31 May 2022
CSI: Contrastive Data Stratification for Interaction Prediction and its Application to Compound-Protein Interaction Prediction A. Kalia Dilip Krishnan Soha Hassoun Tufts University 21 2 0 18 Nov 2021
Pre-training Co-evolutionary Protein Representation via A Pairwise Masked Language Model Liang He Shizhuo Zhang Lijun Wu Huanhuan Xia Fusong Ju ... Jianwei Zhu Pan Deng Jia Zhang Tao Qin Tie-Yan Liu 28 31 0 29 Oct 2021
Is BERT a Cross-Disciplinary Knowledge Learner? A Surprising Finding of Pre-trained Models' Transferability Wei-Tsung Kao Hung-yi Lee 16 16 0 12 Mar 2021